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The map label for this gene is 86750619

Identifier: 86750619

GI number: 86750619

Start: 4017566

End: 4018342

Strand: Reverse

Name: 86750619

Synonym: RPB_3509

Alternate gene names: NA

Gene position: 4018342-4017566 (Counterclockwise)

Preceding gene: 86750623

Following gene: 86750615

Centisome position: 75.37

GC content: 69.88

Gene sequence:

>777_bases
ATGCGGGCGTTCATCTCTCCGGCCCCGATCCGGGGTGATCGCGCCCGGCTCGTCGGCCTGTTGTCCGCGCTCGTCGCGCT
GGCGCTGAGCGGCTGCGCCGGCGGCGATTTCGGCCGCACCCGCGGCGATTTCCGCAACGACGACATGCATCGCTGGATCG
GCGTCGAGGCCACCGGCAGCGTCGGCGCGCGGCCGTCCGACTTCCAGCTCACCGACGAAGAGCGCACGCTGCGCGACATG
GCCTATCCGCTGATCGAGCCGCCGCGACAGCGGCCGGCATGGAAGACCGTGTTCGGCGACTATCAGCCGATCGCCGCCCC
GTGGCGGCAGGCGCCACCGTTCGACCGCACCGCCTACGGCAAGATGCTGATCGACGAGCCGCATCGCTCGCACACCTCGC
GCTACGCCGCGCTCAGCGAAGACGTCCGCAACGACCTGACCCGGTTCGAGCCGTTCAAATTCACCGCGATGCGGGTGATC
GAACTCGACCGCAAACGCAACGCGGCGCTGAAATACGTCTCCGACCTGTCACCGCGCGAGCGCGCCGACGCGATCGGACG
GATGGAGGAGAACGCGCTGATCGTGCAATGGGTGCAGCAGTGCCTGCACCGCCGCGCCTCGTCCTATCGCTGGGCGCTGG
AGCGGCTGGTCATCATGGCCCCCGACACCCTCGCCGCCGACGCCGACCGCCTGATCGCCGAGCTGGAAGCGCAGGCGGCG
AATCTGTCGATCCCGGCGGGCCCGGCGAAGGGGCATGTGGTGGTGTCGAAGGGGTGA

Upstream 100 bases:

>100_bases
AGCGTCATGCCGCGACGCGCGACGACGACGGCCCGGAGCAGGGCGATGCGCCGCGCCGCCGCCGCCGTCGACGCGTCCGT
TCCTGAGATCGGCCGACACC

Downstream 100 bases:

>100_bases
GGGACGGTGCTCGACGAGCTGTTGCGTCATTGCGAGCGCAGCGAAGCAATCCAGCGCCGAGTGTCGAAGTCTGGATTGCT
TCGTCGCTGCGCTCCTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRAFISPAPIRGDRARLVGLLSALVALALSGCAGGDFGRTRGDFRNDDMHRWIGVEATGSVGARPSDFQLTDEERTLRDM
AYPLIEPPRQRPAWKTVFGDYQPIAAPWRQAPPFDRTAYGKMLIDEPHRSHTSRYAALSEDVRNDLTRFEPFKFTAMRVI
ELDRKRNAALKYVSDLSPRERADAIGRMEENALIVQWVQQCLHRRASSYRWALERLVIMAPDTLAADADRLIAELEAQAA
NLSIPAGPAKGHVVVSKG

Sequences:

>Translated_258_residues
MRAFISPAPIRGDRARLVGLLSALVALALSGCAGGDFGRTRGDFRNDDMHRWIGVEATGSVGARPSDFQLTDEERTLRDM
AYPLIEPPRQRPAWKTVFGDYQPIAAPWRQAPPFDRTAYGKMLIDEPHRSHTSRYAALSEDVRNDLTRFEPFKFTAMRVI
ELDRKRNAALKYVSDLSPRERADAIGRMEENALIVQWVQQCLHRRASSYRWALERLVIMAPDTLAADADRLIAELEAQAA
NLSIPAGPAKGHVVVSKG
>Mature_258_residues
MRAFISPAPIRGDRARLVGLLSALVALALSGCAGGDFGRTRGDFRNDDMHRWIGVEATGSVGARPSDFQLTDEERTLRDM
AYPLIEPPRQRPAWKTVFGDYQPIAAPWRQAPPFDRTAYGKMLIDEPHRSHTSRYAALSEDVRNDLTRFEPFKFTAMRVI
ELDRKRNAALKYVSDLSPRERADAIGRMEENALIVQWVQQCLHRRASSYRWALERLVIMAPDTLAADADRLIAELEAQAA
NLSIPAGPAKGHVVVSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28866; Mature: 28866

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFISPAPIRGDRARLVGLLSALVALALSGCAGGDFGRTRGDFRNDDMHRWIGVEATGS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCEECCC
VGARPSDFQLTDEERTLRDMAYPLIEPPRQRPAWKTVFGDYQPIAAPWRQAPPFDRTAYG
CCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHC
KMLIDEPHRSHTSRYAALSEDVRNDLTRFEPFKFTAMRVIELDRKRNAALKYVSDLSPRE
CHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RADAIGRMEENALIVQWVQQCLHRRASSYRWALERLVIMAPDTLAADADRLIAELEAQAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
NLSIPAGPAKGHVVVSKG
CCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MRAFISPAPIRGDRARLVGLLSALVALALSGCAGGDFGRTRGDFRNDDMHRWIGVEATGS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCEECCC
VGARPSDFQLTDEERTLRDMAYPLIEPPRQRPAWKTVFGDYQPIAAPWRQAPPFDRTAYG
CCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHC
KMLIDEPHRSHTSRYAALSEDVRNDLTRFEPFKFTAMRVIELDRKRNAALKYVSDLSPRE
CHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RADAIGRMEENALIVQWVQQCLHRRASSYRWALERLVIMAPDTLAADADRLIAELEAQAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
NLSIPAGPAKGHVVVSKG
CCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA