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The map label for this gene is ycgN [C]

Identifier: 86750615

GI number: 86750615

Start: 4012717

End: 4013229

Strand: Reverse

Name: ycgN [C]

Synonym: RPB_3505

Alternate gene names: 86750615

Gene position: 4013229-4012717 (Counterclockwise)

Preceding gene: 86750619

Following gene: 86750613

Centisome position: 75.27

GC content: 66.47

Gene sequence:

>513_bases
ATGACCGCAGTTCCCAAGAAGATTTCCCCCCAGGACGGGTTCTTCTGGAAAACCAAAACCTTGGAAGAGATGTCCCAGGC
CGAATGGGAGAGCCTGTGCGACGGCTGCGCGCGGTGCTGCCTGGAGAAGCTCGAGGACGAGGATTCGGGGCGGATCTATT
TCACCCATGTCGGCTGCCGGCTGCTCGATGGCGACGCCTGCGCCTGCCACGACTACGCCAATCGCTCGGAACGGGTGCCG
GATTGCGTCCGGCTGACGCCGGAGAACGTGCGCACGCTGAGCTGGCTGCCGCCGAGCTGCGGCTATCGGCTGGTCGCCGA
GGGCCGCGATCTGTACTGGTGGCATCCCTTGATCTCCGGCGATCCGAACACGGTGCACGACGCCGGGGTGTCGGTGCGCG
GGCGCGTCGAGGCGACCGAGACCGAGGTCTCGGTCGAGGACCTCGAAGATCACATCGTCTCCTGGCCGGCCCTGCTGCCG
CGCCGCGCCAAGCTGAAGAAACGGCCGGGCTGA

Upstream 100 bases:

>100_bases
GAGCTCCGGTTCTGATTCCATCAGAACCGGAAAAGCTCTAGAACGGCCTCCCTGTCCGCATCGACGCAAGCGCCGAAGGC
CCGAAAGGCTCGACCAAGGC

Downstream 100 bases:

>100_bases
GCGCGACCGGTCCGCTGAACTCCTCGTTGTGGTTCTGTCGGCGGACCCGCTACGCGTGCGACGCCGGGCTGCGCATCGAC
CACCTGCTGCTCAGCCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTAVPKKISPQDGFFWKTKTLEEMSQAEWESLCDGCARCCLEKLEDEDSGRIYFTHVGCRLLDGDACACHDYANRSERVP
DCVRLTPENVRTLSWLPPSCGYRLVAEGRDLYWWHPLISGDPNTVHDAGVSVRGRVEATETEVSVEDLEDHIVSWPALLP
RRAKLKKRPG

Sequences:

>Translated_170_residues
MTAVPKKISPQDGFFWKTKTLEEMSQAEWESLCDGCARCCLEKLEDEDSGRIYFTHVGCRLLDGDACACHDYANRSERVP
DCVRLTPENVRTLSWLPPSCGYRLVAEGRDLYWWHPLISGDPNTVHDAGVSVRGRVEATETEVSVEDLEDHIVSWPALLP
RRAKLKKRPG
>Mature_169_residues
TAVPKKISPQDGFFWKTKTLEEMSQAEWESLCDGCARCCLEKLEDEDSGRIYFTHVGCRLLDGDACACHDYANRSERVPD
CVRLTPENVRTLSWLPPSCGYRLVAEGRDLYWWHPLISGDPNTVHDAGVSVRGRVEATETEVSVEDLEDHIVSWPALLPR
RAKLKKRPG

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=142, Percent_Identity=53.5211267605634, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3505_RHOP2 (Q2IUB0)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_487111.1
- STRING:   Q2IUB0
- GeneID:   3911307
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_3505
- eggNOG:   COG2983
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- BioCyc:   RPAL316058:RPB_3505-MONOMER
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 19247; Mature: 19116

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVPKKISPQDGFFWKTKTLEEMSQAEWESLCDGCARCCLEKLEDEDSGRIYFTHVGCR
CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEE
LLDGDACACHDYANRSERVPDCVRLTPENVRTLSWLPPSCGYRLVAEGRDLYWWHPLISG
EECCCCEEHHHHHCCCCCCCHHHHCCCCCCEEEECCCCCCCEEEEECCCEEEEECCEECC
DPNTVHDAGVSVRGRVEATETEVSVEDLEDHIVSWPALLPRRAKLKKRPG
CCCCCCCCCCCEECEEECCCHHCCHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
TAVPKKISPQDGFFWKTKTLEEMSQAEWESLCDGCARCCLEKLEDEDSGRIYFTHVGCR
CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEE
LLDGDACACHDYANRSERVPDCVRLTPENVRTLSWLPPSCGYRLVAEGRDLYWWHPLISG
EECCCCEEHHHHHCCCCCCCHHHHCCCCCCEEEECCCCCCCEEEEECCCEEEEECCEECC
DPNTVHDAGVSVRGRVEATETEVSVEDLEDHIVSWPALLPRRAKLKKRPG
CCCCCCCCCCCEECEEECCCHHCCHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA