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The map label for this gene is 86750599

Identifier: 86750599

GI number: 86750599

Start: 3992035

End: 3993210

Strand: Reverse

Name: 86750599

Synonym: RPB_3489

Alternate gene names: NA

Gene position: 3993210-3992035 (Counterclockwise)

Preceding gene: 86750600

Following gene: 86750598

Centisome position: 74.9

GC content: 68.79

Gene sequence:

>1176_bases
ATGCTCGATCGCCTCAAAGCCTTTCTCGCGACCCCTGAAGTCAAAGCCTCGCGCACCGCGAAACTGCTGGCGTTCGAATC
CGGAGGCGTTGCACGGTGGACACCGCGGGACTACGCGCGGTTGTCGCGCGAAGGTTATGTCTCCAACGCGGTGGTGCATC
GCTGCGTCCGGCTGATCGCCGAAAACGCGGCGGCCTGCACGTTTCTGGTGTTCGACGGCGCGCAGGAGAAGGAGGCGCAT
CCGCTGGCGCAACTGATCGCGCGGCCGAATCCGCGGCAGGACGGCGCCGCGCTGTTCGAGACGCTGGTGGCGCATCTCTT
GCTCGCCGGCAACGCCTATGTGGAGGCGGTGGCGCTCGGCGACGCGGTGCACGAACTCTACGCGCTGCGGCCGGACCGGA
TGAAGGTGGTGCCTGGGCCGGACGGCTGGGCCGCGGCCTACGACTACGTGGTCGGCGGCCGCAGCGTGCGGTTCGATCAG
CACGCGACGCCGGTGCCGCCGATCCTGCATCTGACGTTCTTTCATCCGCTCGACGATCATTATGGTCTGGCACCGCTCGA
GGCCGCCGCGGTCGCGGTCGACACCCACAACGCCGCGGCGCGCTGGAACAAGGCTCTGTTGGACAATTCGGCGCGGCCCT
CCGGCGCGCTGATGTATGCCGGGCCGGAAGGCGCGGTGCTCTCCGACGAGCAGTTCGGCCGGCTGAAGCGCGAGCTGGAG
ACGACCTATGAGGGCGCCGCCAATGCCGGCCGGCCGCTGCTGCTCGAAGGCGGGCTCGACTGGCGGCCGATGGCGCTGTC
GCCGAAGGACATGGACTTCCTCGAAGCCAAACACGCGTCCGCGCGAGAAATCGCGCTCGCCTTCGGCGTGCCGCCGATGC
TGCTCGGCATTCCGGGTGACAACACCTTTGCGAACTATCAGGAAGCCAACCGCAGCTTCGTCCGCCAGACTGTGCTGCCG
CTGGCGACCCGGATCGGCAATGCGCTGGCGCAATGGCTGGCGCCGCAATTCGGCGACGGCGTGCGCCTCGTGATCGACAC
CGACCGCATCGACGCGCTGGCGAGCGACCGCGTCGCGCTGTGGGAACGCGTCAGCGCCGCGCCGTTCCTGACGCTGAACG
AGAAGCGTGAAGCCGTCGGCTACGCGCCGCTCGACGGCGGCGACCGGCTGGGGTGA

Upstream 100 bases:

>100_bases
ATCGACTTTCGCCGTAGCGGCCCCGACTCTCCAGGCCGCGCTGCGTCCGGGGCACGCCGGTCTGGCAAACAATTTCCGAA
AGAAATCAACGGACAGCATC

Downstream 100 bases:

>100_bases
GGGCGGGGCCGGAAGGCTGAGCCTGTCGTGATGTGAACGTCGGTCGCGTAGCCTGACGCGATCGCGCGTGGTGGCAGCTA
TCTCAAGCAAAGCGAGATCA

Product: Phage portal protein, HK97

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLDRLKAFLATPEVKASRTAKLLAFESGGVARWTPRDYARLSREGYVSNAVVHRCVRLIAENAAACTFLVFDGAQEKEAH
PLAQLIARPNPRQDGAALFETLVAHLLLAGNAYVEAVALGDAVHELYALRPDRMKVVPGPDGWAAAYDYVVGGRSVRFDQ
HATPVPPILHLTFFHPLDDHYGLAPLEAAAVAVDTHNAAARWNKALLDNSARPSGALMYAGPEGAVLSDEQFGRLKRELE
TTYEGAANAGRPLLLEGGLDWRPMALSPKDMDFLEAKHASAREIALAFGVPPMLLGIPGDNTFANYQEANRSFVRQTVLP
LATRIGNALAQWLAPQFGDGVRLVIDTDRIDALASDRVALWERVSAAPFLTLNEKREAVGYAPLDGGDRLG

Sequences:

>Translated_391_residues
MLDRLKAFLATPEVKASRTAKLLAFESGGVARWTPRDYARLSREGYVSNAVVHRCVRLIAENAAACTFLVFDGAQEKEAH
PLAQLIARPNPRQDGAALFETLVAHLLLAGNAYVEAVALGDAVHELYALRPDRMKVVPGPDGWAAAYDYVVGGRSVRFDQ
HATPVPPILHLTFFHPLDDHYGLAPLEAAAVAVDTHNAAARWNKALLDNSARPSGALMYAGPEGAVLSDEQFGRLKRELE
TTYEGAANAGRPLLLEGGLDWRPMALSPKDMDFLEAKHASAREIALAFGVPPMLLGIPGDNTFANYQEANRSFVRQTVLP
LATRIGNALAQWLAPQFGDGVRLVIDTDRIDALASDRVALWERVSAAPFLTLNEKREAVGYAPLDGGDRLG
>Mature_391_residues
MLDRLKAFLATPEVKASRTAKLLAFESGGVARWTPRDYARLSREGYVSNAVVHRCVRLIAENAAACTFLVFDGAQEKEAH
PLAQLIARPNPRQDGAALFETLVAHLLLAGNAYVEAVALGDAVHELYALRPDRMKVVPGPDGWAAAYDYVVGGRSVRFDQ
HATPVPPILHLTFFHPLDDHYGLAPLEAAAVAVDTHNAAARWNKALLDNSARPSGALMYAGPEGAVLSDEQFGRLKRELE
TTYEGAANAGRPLLLEGGLDWRPMALSPKDMDFLEAKHASAREIALAFGVPPMLLGIPGDNTFANYQEANRSFVRQTVLP
LATRIGNALAQWLAPQFGDGVRLVIDTDRIDALASDRVALWERVSAAPFLTLNEKREAVGYAPLDGGDRLG

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 42388; Mature: 42388

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRLKAFLATPEVKASRTAKLLAFESGGVARWTPRDYARLSREGYVSNAVVHRCVRLIA
CHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHH
ENAAACTFLVFDGAQEKEAHPLAQLIARPNPRQDGAALFETLVAHLLLAGNAYVEAVALG
CCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHH
DAVHELYALRPDRMKVVPGPDGWAAAYDYVVGGRSVRFDQHATPVPPILHLTFFHPLDDH
HHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCC
YGLAPLEAAAVAVDTHNAAARWNKALLDNSARPSGALMYAGPEGAVLSDEQFGRLKRELE
CCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHH
TTYEGAANAGRPLLLEGGLDWRPMALSPKDMDFLEAKHASAREIALAFGVPPMLLGIPGD
HHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHEEEEECCCCEEEECCCC
NTFANYQEANRSFVRQTVLPLATRIGNALAQWLAPQFGDGVRLVIDTDRIDALASDRVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHHH
WERVSAAPFLTLNEKREAVGYAPLDGGDRLG
HHHHCCCCEEEECCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLDRLKAFLATPEVKASRTAKLLAFESGGVARWTPRDYARLSREGYVSNAVVHRCVRLIA
CHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHH
ENAAACTFLVFDGAQEKEAHPLAQLIARPNPRQDGAALFETLVAHLLLAGNAYVEAVALG
CCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHH
DAVHELYALRPDRMKVVPGPDGWAAAYDYVVGGRSVRFDQHATPVPPILHLTFFHPLDDH
HHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCC
YGLAPLEAAAVAVDTHNAAARWNKALLDNSARPSGALMYAGPEGAVLSDEQFGRLKRELE
CCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHH
TTYEGAANAGRPLLLEGGLDWRPMALSPKDMDFLEAKHASAREIALAFGVPPMLLGIPGD
HHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHEEEEECCCCEEEECCCC
NTFANYQEANRSFVRQTVLPLATRIGNALAQWLAPQFGDGVRLVIDTDRIDALASDRVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHHH
WERVSAAPFLTLNEKREAVGYAPLDGGDRLG
HHHHCCCCEEEECCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA