Click here to switch to the map view.

The map label for this gene is 86750583

Identifier: 86750583

GI number: 86750583

Start: 3976757

End: 3978052

Strand: Reverse

Name: 86750583

Synonym: RPB_3472

Alternate gene names: NA

Gene position: 3978052-3976757 (Counterclockwise)

Preceding gene: 86750584

Following gene: 86750582

Centisome position: 74.61

GC content: 71.91

Gene sequence:

>1296_bases
ATGACGGAGGCGTTTCTGCGGCAGGCGGGGACGCGGACGCTGGCCCGGCTGCAGCATGATTTCGCGACCTTCGCGCATCC
GCATCAGGAGCATGGCGAGGCCGGCAACAATGGCGGGCCGTGGACGACCTGGCTGCTGCTCGGCGGCCGCGGCGCCGGCA
AGACGCGGACCGGGGCCGAATGGGTGCGGGCGCTGGCGCATGGCACGCCGCCTTATGCCGAGCGGCCGCATCGCCGGATC
GCGCTGATCGGGGAGAGCTGGCAGGACGCCCGCGAGGTGATGGTGGAGGGCGAGTCCGGCCTGCTGCGCTGTTCGCCGCG
CGCCGAGCGGCCGGAATGGATCGCGTCGCGGCGGCGGCTGGAATGGCGCAATGGCGCGGTCGGGCAGGTGTTCTCCGCCG
ACGATCCGGAAAGCCTGCGCGGGCCGCAATTCGACGCCGCGTGGTGCGACGAGCTGGCGAAATGGCGCTATGCCGAGGCC
TGCTTCGACACGCTGCAATTCGGGCTGCGGCTGGGCCTGCAGCCGCGCCAACTGGTCACCACCACGCCGCGGCCGCTGCC
GCTGATCAAGCGGCTGCTGGCCGATCCGCGCACGCGGGTGACGCGCGCGCCGACGAAGGCGAATGCCGATCATCTGTCGC
CGGCGTTTCTCGATGCCGTGGTCGGCCGCTATGCCGGCACGCGGATGGGGCGGCAGGAACTCGACGGCGAAATGATCGAG
GACCGCGCCGATGCGCTGTGGTCGCGGGCGCTGATCGAATCCTGCCGCGTCGCGCAGCCGCCGGGGCTGGCGCGCGTGGT
GGTGGCGATCGACCCGCCGGGGACCTCGAAGGTCGGCGCGGATGCCTGCGGCATCGTCGCCGTCGGCCGCAGCGACAGCG
GCGCCTACTACGTGCTGGAAGACGCCTCCGCCGCCGGGCTGTCGCCGGCCGCCTGGGCGGCCAAGGCGGTGGCGCTGTAT
CACCGGCTCGACGCCGATACGCTGATCGCCGAAGTCAACATGGGCGGCGAGATGGTGCGCGCCGTGCTGCGCGAGACCGA
CGGGGCGGTGCCGCTGAAGGAAGTCCGCGCCAGCCGCGGCAAATATCTGCGCGCCGAGCCGGTCGCGGCGCTGTACGAGC
AAGGCAAGGTCAAGCATGTCGGCTGCTTCCCGCTGCTCGAAGACGAAATGTGCGACTTCGGCATCGACGGCCTCTCGTCG
GGCCGCTCGCCCGACCGGCTCGACGCCCTGGTGTGGGCGATCACCGGGCTGATGAACGGCCGCAATGCCGGCGGGCCGCG
GATCAGGCAGTTGTGA

Upstream 100 bases:

>100_bases
GGAAGCGTGAACGCCGATGCCGATGACGACCTGCCCGCCGATGCCGATGAATTCCGTCGTCAGCTTGCGCGCCGCATTGA
GGCGCTTGTCCGCGGCCGGG

Downstream 100 bases:

>100_bases
GGGAGGGGCAGGCGTATAGGATGGGTCGCGCGCGCGGAATCATCGCGGTGGGGCCCGTGGTGAGGCGGATCGGTGGGTTA
CGCGCTGCGCGCTAACCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTEAFLRQAGTRTLARLQHDFATFAHPHQEHGEAGNNGGPWTTWLLLGGRGAGKTRTGAEWVRALAHGTPPYAERPHRRI
ALIGESWQDAREVMVEGESGLLRCSPRAERPEWIASRRRLEWRNGAVGQVFSADDPESLRGPQFDAAWCDELAKWRYAEA
CFDTLQFGLRLGLQPRQLVTTTPRPLPLIKRLLADPRTRVTRAPTKANADHLSPAFLDAVVGRYAGTRMGRQELDGEMIE
DRADALWSRALIESCRVAQPPGLARVVVAIDPPGTSKVGADACGIVAVGRSDSGAYYVLEDASAAGLSPAAWAAKAVALY
HRLDADTLIAEVNMGGEMVRAVLRETDGAVPLKEVRASRGKYLRAEPVAALYEQGKVKHVGCFPLLEDEMCDFGIDGLSS
GRSPDRLDALVWAITGLMNGRNAGGPRIRQL

Sequences:

>Translated_431_residues
MTEAFLRQAGTRTLARLQHDFATFAHPHQEHGEAGNNGGPWTTWLLLGGRGAGKTRTGAEWVRALAHGTPPYAERPHRRI
ALIGESWQDAREVMVEGESGLLRCSPRAERPEWIASRRRLEWRNGAVGQVFSADDPESLRGPQFDAAWCDELAKWRYAEA
CFDTLQFGLRLGLQPRQLVTTTPRPLPLIKRLLADPRTRVTRAPTKANADHLSPAFLDAVVGRYAGTRMGRQELDGEMIE
DRADALWSRALIESCRVAQPPGLARVVVAIDPPGTSKVGADACGIVAVGRSDSGAYYVLEDASAAGLSPAAWAAKAVALY
HRLDADTLIAEVNMGGEMVRAVLRETDGAVPLKEVRASRGKYLRAEPVAALYEQGKVKHVGCFPLLEDEMCDFGIDGLSS
GRSPDRLDALVWAITGLMNGRNAGGPRIRQL
>Mature_430_residues
TEAFLRQAGTRTLARLQHDFATFAHPHQEHGEAGNNGGPWTTWLLLGGRGAGKTRTGAEWVRALAHGTPPYAERPHRRIA
LIGESWQDAREVMVEGESGLLRCSPRAERPEWIASRRRLEWRNGAVGQVFSADDPESLRGPQFDAAWCDELAKWRYAEAC
FDTLQFGLRLGLQPRQLVTTTPRPLPLIKRLLADPRTRVTRAPTKANADHLSPAFLDAVVGRYAGTRMGRQELDGEMIED
RADALWSRALIESCRVAQPPGLARVVVAIDPPGTSKVGADACGIVAVGRSDSGAYYVLEDASAAGLSPAAWAAKAVALYH
RLDADTLIAEVNMGGEMVRAVLRETDGAVPLKEVRASRGKYLRAEPVAALYEQGKVKHVGCFPLLEDEMCDFGIDGLSSG
RSPDRLDALVWAITGLMNGRNAGGPRIRQL

Specific function: Unknown

COG id: COG5323

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46993; Mature: 46862

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAFLRQAGTRTLARLQHDFATFAHPHQEHGEAGNNGGPWTTWLLLGGRGAGKTRTGAE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHH
WVRALAHGTPPYAERPHRRIALIGESWQDAREVMVEGESGLLRCSPRAERPEWIASRRRL
HHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
EWRNGAVGQVFSADDPESLRGPQFDAAWCDELAKWRYAEACFDTLQFGLRLGLQPRQLVT
HCCCCCCCCEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
TTPRPLPLIKRLLADPRTRVTRAPTKANADHLSPAFLDAVVGRYAGTRMGRQELDGEMIE
CCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCHHHHH
DRADALWSRALIESCRVAQPPGLARVVVAIDPPGTSKVGADACGIVAVGRSDSGAYYVLE
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEE
DASAAGLSPAAWAAKAVALYHRLDADTLIAEVNMGGEMVRAVLRETDGAVPLKEVRASRG
CCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCC
KYLRAEPVAALYEQGKVKHVGCFPLLEDEMCDFGIDGLSSGRSPDRLDALVWAITGLMNG
CEEECCHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RNAGGPRIRQL
CCCCCCCCCCC
>Mature Secondary Structure 
TEAFLRQAGTRTLARLQHDFATFAHPHQEHGEAGNNGGPWTTWLLLGGRGAGKTRTGAE
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHH
WVRALAHGTPPYAERPHRRIALIGESWQDAREVMVEGESGLLRCSPRAERPEWIASRRRL
HHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
EWRNGAVGQVFSADDPESLRGPQFDAAWCDELAKWRYAEACFDTLQFGLRLGLQPRQLVT
HCCCCCCCCEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
TTPRPLPLIKRLLADPRTRVTRAPTKANADHLSPAFLDAVVGRYAGTRMGRQELDGEMIE
CCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCHHHHH
DRADALWSRALIESCRVAQPPGLARVVVAIDPPGTSKVGADACGIVAVGRSDSGAYYVLE
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEE
DASAAGLSPAAWAAKAVALYHRLDADTLIAEVNMGGEMVRAVLRETDGAVPLKEVRASRG
CCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCC
KYLRAEPVAALYEQGKVKHVGCFPLLEDEMCDFGIDGLSSGRSPDRLDALVWAITGLMNG
CEEECCHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RNAGGPRIRQL
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA