| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750575
Identifier: 86750575
GI number: 86750575
Start: 3972609
End: 3972923
Strand: Reverse
Name: 86750575
Synonym: RPB_3464
Alternate gene names: NA
Gene position: 3972923-3972609 (Counterclockwise)
Preceding gene: 86750576
Following gene: 86750574
Centisome position: 74.52
GC content: 71.11
Gene sequence:
>315_bases ATGGCCAACAGACATCGCGGTGAGATCGAAGCGGAGATCGGCGGCCGGCGTCGCACGCTGGTGCTGACGCTGGGCGCGCT GGCCGAACTGGAGAGCGCGTTCGCGGCATCCGATCTGGTGGCGCTGGCGCAGCGCTTCGGCAGCGGGCATCTGTCGGCGC GCGATCTGTTGCGGATCATCGCGGCGGGTTTGCGCGGCTCGGGCGAGACGGTCGGCGACGACGAGGTCGCGGCGATGACG GTCGCGGGCGGCGCCACCGGCTATGCGACGATCGCGGCCGAACTGATCGCCGCGACCTTCGGCGAAGCGGCATGA
Upstream 100 bases:
>100_bases GCTGTGACCACCGCGCGCATCGTGCGCGCGGCCACCCCCACCCCGCTCGCTGCGCGAGCGACCCTCCCCGCAAGGGGGAG GGTGAACAAACGAGGGCATC
Downstream 100 bases:
>100_bases CGCCGTTCCCCTGGGCCGAGGCGATGCAGTTCGGCTTCGGCGTGCTGCGGCTGTCGTCGGAGCAATTCTGGCGGATGACG CCGCGCGAGTTCGCCAGCGC
Product: gene transfer agent (GTA) orfg10
Products: NA
Alternate protein names: Gene Transfer Agent; Gene Transfer Agent Orfg; Transfer Agent; Gene Transfer Agent Protein
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MANRHRGEIEAEIGGRRRTLVLTLGALAELESAFAASDLVALAQRFGSGHLSARDLLRIIAAGLRGSGETVGDDEVAAMT VAGGATGYATIAAELIAATFGEAA
Sequences:
>Translated_104_residues MANRHRGEIEAEIGGRRRTLVLTLGALAELESAFAASDLVALAQRFGSGHLSARDLLRIIAAGLRGSGETVGDDEVAAMT VAGGATGYATIAAELIAATFGEAA >Mature_103_residues ANRHRGEIEAEIGGRRRTLVLTLGALAELESAFAASDLVALAQRFGSGHLSARDLLRIIAAGLRGSGETVGDDEVAAMTV AGGATGYATIAAELIAATFGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10539; Mature: 10408
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRHRGEIEAEIGGRRRTLVLTLGALAELESAFAASDLVALAQRFGSGHLSARDLLRII CCCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AAGLRGSGETVGDDEVAAMTVAGGATGYATIAAELIAATFGEAA HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ANRHRGEIEAEIGGRRRTLVLTLGALAELESAFAASDLVALAQRFGSGHLSARDLLRII CCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AAGLRGSGETVGDDEVAAMTVAGGATGYATIAAELIAATFGEAA HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA