Click here to switch to the map view.

The map label for this gene is pqqB [H]

Identifier: 86750533

GI number: 86750533

Start: 3910485

End: 3911408

Strand: Reverse

Name: pqqB [H]

Synonym: RPB_3422

Alternate gene names: 86750533

Gene position: 3911408-3910485 (Counterclockwise)

Preceding gene: 86750534

Following gene: 86750532

Centisome position: 73.36

GC content: 68.51

Gene sequence:

>924_bases
ATGCGAGTCGTCGTTCTCGGGGCGGCGGCCGGAGGCGGAGTCCCGCAATGGAACTGCGGCTGCGCGATCTGCCGCGCGGC
ATTTGCCGATCCGGCGCTCAGACGCACGCAGGCGTCGATCGCCGTCAGCGCTGATAGCGTGCACTGGTTCCTGGTCAATG
CCTCGCCGGATCTGCGCCAGCAGATCATCGCGACGCCGCAGCTTCACCCAGCGACCGGCGCGCTGCGCCACAGCCCGATC
GCGGGCGTGATCCTCAGCAATGGCGAGGTCGATGCGGTGGCGGGCCTGCTGTCGATGCGCGAAGGTTCACCGTTCGCGAT
CTACGCCCATCCCAAGGTGCTGGCGATCCTGAAGGCGAACAGCATCTTCAACGTGCTCGACGAGAAACTGGTGCCGCGCC
GATCGATCGAGATCGATCGGCCGTTCGAGCCGATGCTGCCGGATGCGACGCCATCGGGCTTCGAGGTGGTGGCGTTCGCC
GTGCCCGGCAAGGGCGCGTGGTATCTCGAAGGGCGGGCGCATCCGGGCGGCGAGGCGGCGGACGGCGACACGCTCGGGCT
CACCATCACCGACAAGGCCACGCGACAATCCATCCACGTTCTCACCGCCTGTGCGCGGGTGACCGATGACTTGAAGGCGC
GGCTCGCCGGCTCGCCGCTGCTGCTGTTCGACGGCACGGTGTGGCGCGACGACGAATTGATCGCCGCCGGGCTCGGCGCC
AAGACCGGGCAGGCGATGGGGCACATCGCGATGTCGGGCGCGGACGGCGCGATCGCCGCGCTCGACGGCCTAGGCGTTGC
GCAAAAGCTGTTCGTGCATATCAACAATTCCAACCCGGCGCTGCTTTGCGGGTCCGCCGAGCGCAGCGCGGTGGAGCGCG
CGGGTTGGCAAATTCCGGCCGACGGCACGGAGGTGACGCTGTGA

Upstream 100 bases:

>100_bases
CGGCTGCTTTCGTTTCGGTCACGCCGCCGCCGTCGTCGCCATTCGACGATGACGGATCGGCAGATGCTCATTCGATCGAG
TTCAGAGGCAGAGAGTGGCC

Downstream 100 bases:

>100_bases
ATGCGATGACCGCGTTTTCGATCAACGGCGCAGCCCCGCTCGCGAGCGCCGGCGAATTGGAAGCCGCGCTGCGGATGATC
GGCGCCACGCGCTATCACAA

Product: pyrroloquinoline quinone biosynthesis protein PqqB

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRVVVLGAAAGGGVPQWNCGCAICRAAFADPALRRTQASIAVSADSVHWFLVNASPDLRQQIIATPQLHPATGALRHSPI
AGVILSNGEVDAVAGLLSMREGSPFAIYAHPKVLAILKANSIFNVLDEKLVPRRSIEIDRPFEPMLPDATPSGFEVVAFA
VPGKGAWYLEGRAHPGGEAADGDTLGLTITDKATRQSIHVLTACARVTDDLKARLAGSPLLLFDGTVWRDDELIAAGLGA
KTGQAMGHIAMSGADGAIAALDGLGVAQKLFVHINNSNPALLCGSAERSAVERAGWQIPADGTEVTL

Sequences:

>Translated_307_residues
MRVVVLGAAAGGGVPQWNCGCAICRAAFADPALRRTQASIAVSADSVHWFLVNASPDLRQQIIATPQLHPATGALRHSPI
AGVILSNGEVDAVAGLLSMREGSPFAIYAHPKVLAILKANSIFNVLDEKLVPRRSIEIDRPFEPMLPDATPSGFEVVAFA
VPGKGAWYLEGRAHPGGEAADGDTLGLTITDKATRQSIHVLTACARVTDDLKARLAGSPLLLFDGTVWRDDELIAAGLGA
KTGQAMGHIAMSGADGAIAALDGLGVAQKLFVHINNSNPALLCGSAERSAVERAGWQIPADGTEVTL
>Mature_307_residues
MRVVVLGAAAGGGVPQWNCGCAICRAAFADPALRRTQASIAVSADSVHWFLVNASPDLRQQIIATPQLHPATGALRHSPI
AGVILSNGEVDAVAGLLSMREGSPFAIYAHPKVLAILKANSIFNVLDEKLVPRRSIEIDRPFEPMLPDATPSGFEVVAFA
VPGKGAWYLEGRAHPGGEAADGDTLGLTITDKATRQSIHVLTACARVTDDLKARLAGSPLLLFDGTVWRDDELIAAGLGA
KTGQAMGHIAMSGADGAIAALDGLGVAQKLFVHINNSNPALLCGSAERSAVERAGWQIPADGTEVTL

Specific function: May be involved in the transport of PQQ or its precursor to the periplasm [H]

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011842 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31957; Mature: 31957

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVVLGAAAGGGVPQWNCGCAICRAAFADPALRRTQASIAVSADSVHWFLVNASPDLRQ
CEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHEEEEEEECCEEEEEEECCHHHHH
QIIATPQLHPATGALRHSPIAGVILSNGEVDAVAGLLSMREGSPFAIYAHPKVLAILKAN
HHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCEEEEEEECC
SIFNVLDEKLVPRRSIEIDRPFEPMLPDATPSGFEVVAFAVPGKGAWYLEGRAHPGGEAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCC
DGDTLGLTITDKATRQSIHVLTACARVTDDLKARLAGSPLLLFDGTVWRDDELIAAGLGA
CCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCEEEECCCC
KTGQAMGHIAMSGADGAIAALDGLGVAQKLFVHINNSNPALLCGSAERSAVERAGWQIPA
CCCCCCEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEECCCHHHHHHHCCCCCCC
DGTEVTL
CCCEECC
>Mature Secondary Structure
MRVVVLGAAAGGGVPQWNCGCAICRAAFADPALRRTQASIAVSADSVHWFLVNASPDLRQ
CEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHEEEEEEECCEEEEEEECCHHHHH
QIIATPQLHPATGALRHSPIAGVILSNGEVDAVAGLLSMREGSPFAIYAHPKVLAILKAN
HHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCEEEEEEECC
SIFNVLDEKLVPRRSIEIDRPFEPMLPDATPSGFEVVAFAVPGKGAWYLEGRAHPGGEAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCC
DGDTLGLTITDKATRQSIHVLTACARVTDDLKARLAGSPLLLFDGTVWRDDELIAAGLGA
CCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCEEEECCCC
KTGQAMGHIAMSGADGAIAALDGLGVAQKLFVHINNSNPALLCGSAERSAVERAGWQIPA
CCCCCCEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEECCCHHHHHHHCCCCCCC
DGTEVTL
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA