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The map label for this gene is 86750518

Identifier: 86750518

GI number: 86750518

Start: 3892806

End: 3894008

Strand: Reverse

Name: 86750518

Synonym: RPB_3407

Alternate gene names: NA

Gene position: 3894008-3892806 (Counterclockwise)

Preceding gene: 86750519

Following gene: 86750517

Centisome position: 73.04

GC content: 65.59

Gene sequence:

>1203_bases
ATGGTCATGCGTCACATTCCTCGGCCGTTGGTCGTGCCTCTGATGATCGCGTTGAGTTCGCTGCTGGCGGCTTGCGCGTC
GAAGCCGCGGGTGCCGTATACCGCCGCCGAAGCTTCCACCGCACGGGTGCTCGATCTCAAGGATCTGCGGCGCTATGCGG
ACGAGCCGGCGTCGGCGTTCCGGGACGACAAGATCATTTCCGGGCCGCGCGCCTATCTGGCGCTGTCCGGCGGCGGCGCC
GACGGCGCCTATGGCGCGGGCGTGCTCAACGGATGGACCGACGCCGGAACCCGGCCGTCGTTCTCGATCGTCTCGGGGGT
CAGCACCGGTGCGCTGATCGCGCCGTTCGCGTTCCTCGGCCCGCAATACGATCCGACCTTGCGCGAGTTCTACACCAGCG
GCATCGCCGAGAGTCTGCTCGACTCGCCGAATCCGTTCAACGCGATCTTCGGCTCGGGATTGTTCGGCAACACCCGGCTG
CGCGAACTGGTCGCGCAATACATCAATGCGGATTTCATGGCCGCGGTCGCGGACGAGCACGCCAAGGGCCGGATGCTGTT
CGTGGTGACGACCAATCTGGACTCCCAGCGCGCCGTGATCTGGAACATGGGCCGGATCGCGTCGCTGCGCTCGATGCAGG
CGCTCAACCTGTTCCGGGACGTGGTGGCGGCATCGGCCAGCCTTCCGGCGATTTTCCCGCCGATGCTGGTGAACGCCGAG
TCCAACGGCGTCCGTTTCCAGGAGATGCATGTCGATGGCGGCGTCACCGCCCCGGTCCTGACGTTGCCGGAGGCCTATCT
GCTGCGCAACGCGGCGTGGGGCAAGTCGCTCGACCTGCAGCTCTACATCCTGATGAACAACAAGATCGAACCCGAATTCC
AGGTGGTTCCGAACCGGACCCTGGAGATCGCGGCGCGGTCGTCGTCGACGCTGGTCAAGGCGCAGACCAAGTCGATCCTC
TACAGCACCTATGACGCCGCCCGCCGCAACAAATACGGCTTCAACCTGACCTACATCGAAAGCGATCGGCCGGCGTCGCC
CTCTGCGGGCTTCGACACCGCCTATATGCGCGACCTGTTCCAATACGGCTACGACCGGGCGAGGTCGGGCCATGCGTGGT
CGAAATCGCCTCCTGCGGAAACTCCGACCGCGGTTCCGGTCGCCGAGGCAAAACCCGTCCGGCGACTGGCCGGCGCCAAC
TGA

Upstream 100 bases:

>100_bases
GTTCCACGATCGACGTCCTCGGCACAATCCGCGGAGGCGATGACCGAGCGGCATTGCGACGCCTCATCGAATCCTTAAGC
CTTTTCCTCGATCGTTCGGT

Downstream 100 bases:

>100_bases
ACGTGACGCTTGTCGACGCGGCCTGCCGCCGCGTCTCGAAGAGAGCGAGGCGGACATCATGTCTGTACGTATCGTCCTGT
CGACGCTGACGGCGGCATCG

Product: patatin

Products: NA

Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MVMRHIPRPLVVPLMIALSSLLAACASKPRVPYTAAEASTARVLDLKDLRRYADEPASAFRDDKIISGPRAYLALSGGGA
DGAYGAGVLNGWTDAGTRPSFSIVSGVSTGALIAPFAFLGPQYDPTLREFYTSGIAESLLDSPNPFNAIFGSGLFGNTRL
RELVAQYINADFMAAVADEHAKGRMLFVVTTNLDSQRAVIWNMGRIASLRSMQALNLFRDVVAASASLPAIFPPMLVNAE
SNGVRFQEMHVDGGVTAPVLTLPEAYLLRNAAWGKSLDLQLYILMNNKIEPEFQVVPNRTLEIAARSSSTLVKAQTKSIL
YSTYDAARRNKYGFNLTYIESDRPASPSAGFDTAYMRDLFQYGYDRARSGHAWSKSPPAETPTAVPVAEAKPVRRLAGAN

Sequences:

>Translated_400_residues
MVMRHIPRPLVVPLMIALSSLLAACASKPRVPYTAAEASTARVLDLKDLRRYADEPASAFRDDKIISGPRAYLALSGGGA
DGAYGAGVLNGWTDAGTRPSFSIVSGVSTGALIAPFAFLGPQYDPTLREFYTSGIAESLLDSPNPFNAIFGSGLFGNTRL
RELVAQYINADFMAAVADEHAKGRMLFVVTTNLDSQRAVIWNMGRIASLRSMQALNLFRDVVAASASLPAIFPPMLVNAE
SNGVRFQEMHVDGGVTAPVLTLPEAYLLRNAAWGKSLDLQLYILMNNKIEPEFQVVPNRTLEIAARSSSTLVKAQTKSIL
YSTYDAARRNKYGFNLTYIESDRPASPSAGFDTAYMRDLFQYGYDRARSGHAWSKSPPAETPTAVPVAEAKPVRRLAGAN
>Mature_400_residues
MVMRHIPRPLVVPLMIALSSLLAACASKPRVPYTAAEASTARVLDLKDLRRYADEPASAFRDDKIISGPRAYLALSGGGA
DGAYGAGVLNGWTDAGTRPSFSIVSGVSTGALIAPFAFLGPQYDPTLREFYTSGIAESLLDSPNPFNAIFGSGLFGNTRL
RELVAQYINADFMAAVADEHAKGRMLFVVTTNLDSQRAVIWNMGRIASLRSMQALNLFRDVVAASASLPAIFPPMLVNAE
SNGVRFQEMHVDGGVTAPVLTLPEAYLLRNAAWGKSLDLQLYILMNNKIEPEFQVVPNRTLEIAARSSSTLVKAQTKSIL
YSTYDAARRNKYGFNLTYIESDRPASPSAGFDTAYMRDLFQYGYDRARSGHAWSKSPPAETPTAVPVAEAKPVRRLAGAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43308; Mature: 43308

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMRHIPRPLVVPLMIALSSLLAACASKPRVPYTAAEASTARVLDLKDLRRYADEPASAF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECHHHHHHHHCCHHHHH
RDDKIISGPRAYLALSGGGADGAYGAGVLNGWTDAGTRPSFSIVSGVSTGALIAPFAFLG
CCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHC
PQYDPTLREFYTSGIAESLLDSPNPFNAIFGSGLFGNTRLRELVAQYINADFMAAVADEH
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHC
AKGRMLFVVTTNLDSQRAVIWNMGRIASLRSMQALNLFRDVVAASASLPAIFPPMLVNAE
CCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
SNGVRFQEMHVDGGVTAPVLTLPEAYLLRNAAWGKSLDLQLYILMNNKIEPEFQVVPNRT
CCCEEEEEEEECCCCCCCHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEECCCCE
LEIAARSSSTLVKAQTKSILYSTYDAARRNKYGFNLTYIESDRPASPSAGFDTAYMRDLF
EEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
QYGYDRARSGHAWSKSPPAETPTAVPVAEAKPVRRLAGAN
HHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MVMRHIPRPLVVPLMIALSSLLAACASKPRVPYTAAEASTARVLDLKDLRRYADEPASAF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECHHHHHHHHCCHHHHH
RDDKIISGPRAYLALSGGGADGAYGAGVLNGWTDAGTRPSFSIVSGVSTGALIAPFAFLG
CCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHC
PQYDPTLREFYTSGIAESLLDSPNPFNAIFGSGLFGNTRLRELVAQYINADFMAAVADEH
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHC
AKGRMLFVVTTNLDSQRAVIWNMGRIASLRSMQALNLFRDVVAASASLPAIFPPMLVNAE
CCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
SNGVRFQEMHVDGGVTAPVLTLPEAYLLRNAAWGKSLDLQLYILMNNKIEPEFQVVPNRT
CCCEEEEEEEECCCCCCCHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEECCCCE
LEIAARSSSTLVKAQTKSILYSTYDAARRNKYGFNLTYIESDRPASPSAGFDTAYMRDLF
EEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
QYGYDRARSGHAWSKSPPAETPTAVPVAEAKPVRRLAGAN
HHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA