Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86750443

Identifier: 86750443

GI number: 86750443

Start: 3812813

End: 3813529

Strand: Reverse

Name: 86750443

Synonym: RPB_3332

Alternate gene names: NA

Gene position: 3813529-3812813 (Counterclockwise)

Preceding gene: 86750444

Following gene: 86750441

Centisome position: 71.53

GC content: 67.09

Gene sequence:

>717_bases
ATGAGCGCGTCCGCGCCGGTCACGATCCATCGTGTGACGCAACTCGACCTGTGGGTCGACGACCATGTGTGGCCGTTCGC
ACAAACGCACCGGACGAAGATCGATGGCTATTTCGCGGCGCGGCAGCTCGAGCAGCCGAAGCTGTGGAACGGCCGCGTGC
TGATGGGGCGTCGACCGCGCTTCGAAGGCGGCCGCTTCAGCGCCGACTATTTCGAGACCGACTTCGCCAGCTTCCTGTGC
TGGCGCGAATGGGAGTTTCCCGATCTGTCGGTGTTCAACGGCTTCGGGATGGGGGTGATCCGCTCGAGCGACGGCGCCAT
CGTGCTCGGCGAGATGGGCGCCCACACCGCCAATGCCGGCAAGGTGTATTTCGCCGGCGGCACGCCCGACCCGTCCGATG
TCCGCGGCAAGCGTCTCGATATTCCCGCCAGCGTCGCGCGCGAGGTCGAGGAGGAGACCGGGCTGCGGCGCTCGGATTAT
CGCGCGGCCGATCATTGGCACTGCGTCGAGGCCGGCCCCTACGTCGCGATGCTGCGCCTGCTGGATGTCTATCTGCCGGC
CGAGGCGCTGCAGGGCCGGATCGAGGCGCATCTGGCGCGCGACGCGTTGCCGGAGTTCAGCCGGGTGCATCTGGTGCGGT
CGGAGGCGGATTTTCTGCCGACGATGCCGCGCTTCGTCACCGCCTATCTCACCATGCTGCTCGACGGCGAGGATTGA

Upstream 100 bases:

>100_bases
GATGTGGCGAAAGCCAATATCGACGTCACCAGGACCTACACCAACGCCTTCGTCGAGCAGGCGGCGAAGACGTCGGGCGC
GGCGAAGTAGCGGCGTCCCC

Downstream 100 bases:

>100_bases
GCAAAACTCTCCGTCATTGCGAGCGAAGCGAAGCAATCCAGAGGCACAGTGCTCGGCGCTGGATTGCTTCGTCGCTGCGC
TCCTCGCAATGACGGGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Acetyltransferase GNAT Family; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; NUDIX Hydrolase Family Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPRFEGGRFSADYFETDFASFLC
WREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAGKVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDY
RAADHWHCVEAGPYVAMLRLLDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED

Sequences:

>Translated_238_residues
MSASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPRFEGGRFSADYFETDFASFLC
WREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAGKVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDY
RAADHWHCVEAGPYVAMLRLLDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED
>Mature_237_residues
SASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPRFEGGRFSADYFETDFASFLCW
REWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAGKVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDYR
AADHWHCVEAGPYVAMLRLLDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26863; Mature: 26731

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPR
CCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCC
FEGGRFSADYFETDFASFLCWREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAG
CCCCCEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCC
KVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDYRAADHWHCVEAGPYVAMLRL
EEEEECCCCCHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHH
LDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED
HHHHCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPR
CCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCC
FEGGRFSADYFETDFASFLCWREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAG
CCCCCEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCC
KVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDYRAADHWHCVEAGPYVAMLRL
EEEEECCCCCHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHH
LDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED
HHHHCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA