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The map label for this gene is bioY [H]

Identifier: 86750398

GI number: 86750398

Start: 3759757

End: 3760335

Strand: Reverse

Name: bioY [H]

Synonym: RPB_3287

Alternate gene names: 86750398

Gene position: 3760335-3759757 (Counterclockwise)

Preceding gene: 86750399

Following gene: 86750397

Centisome position: 70.53

GC content: 68.22

Gene sequence:

>579_bases
ATGATGTCACAATCCGCCGCGCGTTTCGGCACCCGCGATCTCGCCCTGGTCGGCCTCGGCGCCGGCCTGATCATGGCGCT
CGGAGCCATTCCGCCGATCGTCGTCGGCGTGTTGCCGGTGCCGATCACGCTGCAGTCGTTGGGCGTGATGTTGGTCGGTC
TGATGTTCGGGCCGAAACGCGGGGCGCTCGCCTGCCTCACGGTGCTGGCGCTGGTCGCTGCGGGCCTGCCGGTCCTGGCC
GGCGGTCGCGGCGGACTGGCGGTGTTCGCCGGTCCCACCGTCGGCTATCTGCTCGCCTGGGCGCCGGCGGCCTATGCCGT
CGGCTTCCTGGCGATGCGTGCCGAGGCGTTGCAGCGGCCATTGTGGCGCGGGATCGCCTATCTGGCGGCGACGATCTTCG
GAGGGATCATCGTTCTTCACCTCGGCGGCATTCTGTGGCTCGCAGCGGTCAGTCACATCAACGTCGCGACGGTGATGTTG
GGCTCGCTGGCGTTCTTGCCGGGCGATCTGATCAAGGCCGTGCTCACCGTCCTGATCGTGCAGCGGGTCGAGGCGATGCT
GACTTTGCCGAGGCTCTGA

Upstream 100 bases:

>100_bases
GCCGTGCGCAGCGTCGCGCAGCGCGTCGCGCGTGTGGCGCCGTGCCCTACGACGTTTCGGCTCTCGAGGTCGGGGGCGGC
AAGAGAGGAGACACTGCACC

Downstream 100 bases:

>100_bases
TTCCGGCCTCGGCGAGGCCTCGATGACCGGCGTCGCGCAATGAGCGCGTGTGATTTGCACGGCCTGCAAGCGGATCGGAG
GCGATTAGACATGTATCAAA

Product: BioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MMSQSAARFGTRDLALVGLGAGLIMALGAIPPIVVGVLPVPITLQSLGVMLVGLMFGPKRGALACLTVLALVAAGLPVLA
GGRGGLAVFAGPTVGYLLAWAPAAYAVGFLAMRAEALQRPLWRGIAYLAATIFGGIIVLHLGGILWLAAVSHINVATVML
GSLAFLPGDLIKAVLTVLIVQRVEAMLTLPRL

Sequences:

>Translated_192_residues
MMSQSAARFGTRDLALVGLGAGLIMALGAIPPIVVGVLPVPITLQSLGVMLVGLMFGPKRGALACLTVLALVAAGLPVLA
GGRGGLAVFAGPTVGYLLAWAPAAYAVGFLAMRAEALQRPLWRGIAYLAATIFGGIIVLHLGGILWLAAVSHINVATVML
GSLAFLPGDLIKAVLTVLIVQRVEAMLTLPRL
>Mature_192_residues
MMSQSAARFGTRDLALVGLGAGLIMALGAIPPIVVGVLPVPITLQSLGVMLVGLMFGPKRGALACLTVLALVAAGLPVLA
GGRGGLAVFAGPTVGYLLAWAPAAYAVGFLAMRAEALQRPLWRGIAYLAATIFGGIIVLHLGGILWLAAVSHINVATVML
GSLAFLPGDLIKAVLTVLIVQRVEAMLTLPRL

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19609; Mature: 19609

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSQSAARFGTRDLALVGLGAGLIMALGAIPPIVVGVLPVPITLQSLGVMLVGLMFGPKR
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
GALACLTVLALVAAGLPVLAGGRGGLAVFAGPTVGYLLAWAPAAYAVGFLAMRAEALQRP
HHHHHHHHHHHHHCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWRGIAYLAATIFGGIIVLHLGGILWLAAVSHINVATVMLGSLAFLPGDLIKAVLTVLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QRVEAMLTLPRL
HHHHHHHHCCCC
>Mature Secondary Structure
MMSQSAARFGTRDLALVGLGAGLIMALGAIPPIVVGVLPVPITLQSLGVMLVGLMFGPKR
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
GALACLTVLALVAAGLPVLAGGRGGLAVFAGPTVGYLLAWAPAAYAVGFLAMRAEALQRP
HHHHHHHHHHHHHCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWRGIAYLAATIFGGIIVLHLGGILWLAAVSHINVATVMLGSLAFLPGDLIKAVLTVLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QRVEAMLTLPRL
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]