| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750395
Identifier: 86750395
GI number: 86750395
Start: 3756781
End: 3757374
Strand: Reverse
Name: 86750395
Synonym: RPB_3284
Alternate gene names: NA
Gene position: 3757374-3756781 (Counterclockwise)
Preceding gene: 86750397
Following gene: 86750391
Centisome position: 70.47
GC content: 67.34
Gene sequence:
>594_bases ATGGCGATGCAACGCGAAGCCGGCTTGACGCAGACGCCGCGTCGGCGATACGACGCCGGCGTGATCATCGTCAGCGCCCT CAGCCATGCTCAGGATCTCGTCGCGCGGCTGCGGCCGGCGCGGTCGCTGTCCTTGATGGCGCCGTGGCAGCGAGTCGTCT TCAACGAGGCCTGGCTGCCCGAACAACGGCTGATCCTCGCTTTCAACGACGTCGTCGAGACCGGCTCCGTCCATGTCGCG CCGGATGATGCGATCGTGCGCAGCATCATCGAATTCGCGCACGGCTGTGAAAGCGGTCAGGACGTTCTGGTGCATTGCTG GATGGGCGTCAGCCGCTCGCCGGCCGCGGCCTATATCATCGCCTGCGCGCGCGCGCCGGGCGACGAGCACGCGATCGCCG AGGAATTGCGCCGCTGTTCGCCGGTGGCGACGCCGAACCGGCTGATGGTGGCGATTGCGGATGACATTCTCGCGCGCAAC GGTCGCATGGTCGAGGCGATCGAGCACATCGGGCGGGGAGTCGAGTATGACGGCGACGCCGCGCCGTTCTGCTTGCGGCT CGACTGGCGCGATGGTCCGGCGCATCAGATCTGA
Upstream 100 bases:
>100_bases GTCGCGCGCGGCGTGAAATGGATGCGGGAGATCAACTCATCGACGTCGGGTGTGGTCATCGGGAAACTCGATAGGAGGGG AAGCAGGAGCGGGCGGACGA
Downstream 100 bases:
>100_bases CTCCCGCCTGCAATCGCCGCGACGCCGAGCAACAGTCCGATCTGGGCGAGTTGTTCGGTCGCGCCGAGTACGTCGCCGAC ATAGCCGCCGAGCAGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLPEQRLILAFNDVVETGSVHVA PDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYIIACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARN GRMVEAIEHIGRGVEYDGDAAPFCLRLDWRDGPAHQI
Sequences:
>Translated_197_residues MAMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLPEQRLILAFNDVVETGSVHVA PDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYIIACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARN GRMVEAIEHIGRGVEYDGDAAPFCLRLDWRDGPAHQI >Mature_196_residues AMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLPEQRLILAFNDVVETGSVHVAP DDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYIIACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARNG RMVEAIEHIGRGVEYDGDAAPFCLRLDWRDGPAHQI
Specific function: Unknown
COG id: COG5350
COG function: function code R; Predicted protein tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21683; Mature: 21552
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLP CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCC EQRLILAFNDVVETGSVHVAPDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYII CCCEEEEEHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCCCCEEEE ACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARNGRMVEAIEHIGRGVEYDGDA EEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCC APFCLRLDWRDGPAHQI CCEEEEEECCCCCCCCC >Mature Secondary Structure AMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLP CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCC EQRLILAFNDVVETGSVHVAPDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYII CCCEEEEEHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCCCCEEEE ACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARNGRMVEAIEHIGRGVEYDGDA EEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCC APFCLRLDWRDGPAHQI CCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA