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The map label for this gene is cycB [H]

Identifier: 86750379

GI number: 86750379

Start: 3738917

End: 3739231

Strand: Reverse

Name: cycB [H]

Synonym: RPB_3268

Alternate gene names: 86750379

Gene position: 3739231-3738917 (Counterclockwise)

Preceding gene: 86750381

Following gene: 86750378

Centisome position: 70.13

GC content: 64.13

Gene sequence:

>315_bases
ATGCGCCCTTTGACCTTCGGTCTGTCGTTGCTGCTGCTCGCCGGCGCATCCGCCCCCACATTCGCCGCAGATGCCACCAA
CGGCGAGACTCTGGCCAAGCGCTGGTGCATCAGTTGTCACCTCGTCTCCGAGGACCAGCGCAAGGGCACCGACCTGGTCG
CGTCGTTTGCGTCGATCGCATCGCAGCCCGGATTCGATCAGGACAAGCTGGCGATCTTCCTGCTCGAGCCGCACCCGAAG
ATGTCCAGCATGGCGCTGAGCCGGATCGAGGCGCAGAACATCGCGGCCTATATCGCCGAGCAGAAACGCCGGTAG

Upstream 100 bases:

>100_bases
CGACAGGGGACACCTATCGTTCGTGGAACCATTGCAGTAAACAGCATGGTGACTCGCGAGTTCCAATGGATGTGAGCCGG
GCTTGCAGAAGAGGATTGCC

Downstream 100 bases:

>100_bases
TGCATTGGCGCGGCGGCTTCGCGTCGCGCTCCGGCCAGCGTCTCGACGCAAGTGGGACCGGGGCTTTCCCGGCATCCTCG
CCGCACGCGAACGGCCCGGG

Product: cytochrome C precursor

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRPLTFGLSLLLLAGASAPTFAADATNGETLAKRWCISCHLVSEDQRKGTDLVASFASIASQPGFDQDKLAIFLLEPHPK
MSSMALSRIEAQNIAAYIAEQKRR

Sequences:

>Translated_104_residues
MRPLTFGLSLLLLAGASAPTFAADATNGETLAKRWCISCHLVSEDQRKGTDLVASFASIASQPGFDQDKLAIFLLEPHPK
MSSMALSRIEAQNIAAYIAEQKRR
>Mature_104_residues
MRPLTFGLSLLLLAGASAPTFAADATNGETLAKRWCISCHLVSEDQRKGTDLVASFASIASQPGFDQDKLAIFLLEPHPK
MSSMALSRIEAQNIAAYIAEQKRR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11278; Mature: 11278

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLTFGLSLLLLAGASAPTFAADATNGETLAKRWCISCHLVSEDQRKGTDLVASFASIA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
SQPGFDQDKLAIFLLEPHPKMSSMALSRIEAQNIAAYIAEQKRR
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPLTFGLSLLLLAGASAPTFAADATNGETLAKRWCISCHLVSEDQRKGTDLVASFASIA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
SQPGFDQDKLAIFLLEPHPKMSSMALSRIEAQNIAAYIAEQKRR
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663888; 12597275; 1663887 [H]