| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutL [H]
Identifier: 86750224
GI number: 86750224
Start: 3544543
End: 3546828
Strand: Reverse
Name: cutL [H]
Synonym: RPB_3111
Alternate gene names: 86750224
Gene position: 3546828-3544543 (Counterclockwise)
Preceding gene: 86750225
Following gene: 86750223
Centisome position: 66.52
GC content: 66.75
Gene sequence:
>2286_bases GTGAACGAGCGCGTGCCGCTGGTTGGACAGCCGATCGAGCGTGTCGAGGATCCAAAGCTGCTGCGCGGACTCGGCAGCTT CGTCGACGACGTGCATCGCGACGGCATGCTGCATGCCGCGATTCTGCGCAGCTCGGTCGCGCACGGCGTGATCCGGCGCA TCGACGTCACCGCGGCGCGGGCGATGCCGGGCGTGCATGCGGTCTATACCGCCGAGGATATCGGCGCGGTGCCGCGGATT CCGGTGCGGCTGTTTCCCAACGAGGCGATGGAGCCGTTCCGGCAGCCGGTGATCGCCGACGGCAAGGTCCGCTTCGTCGG CGAGCCGATGGCGATCGTGATCGCCGACACACCGGCGCTGGCGGAGGACGCGCTCGAATTGATCGAGGCGGATATCGACC CCCTGCCGGCGGTCACGAGGTTCGAGGACGAGGTCGCGCACGACGCGCTGCTGTTCGAGGCACACGGCTCCAACCGGGTG TTCGACTACGAGGTCAGCCGCGGCGAGATCGACGATACCTTCGAGACCGCGCCCTACACCCGCCGCGAGCGGCTGTACGT GCACCGCCATACCGGTATCACGATGGAGACGCGTGGCGTGGTGTCCGAATGGGACGCCGCCGCAGGCCGGATGACGTCGT GGGGCGCCACCAAGGTCCCGTTCGCCAACCGCAAGATTCTGGCCGGGATGCTCGATCTGCCCGAAGAGCAGGTGGTGATG ATCGAGGGTAATGCCGGCGGCAGCTTCGGCGTGCGCGGCGAATTCTTCCCGGAGGATTTCCTGGTCCCGTTCGCCGCGCG CAAAATCGGCAGGCCGGTCAAATGGATCGAGGACCGCCGGGAGCATTTGCTCGCGGTGACCCATTCGCGCGACGTCGCCG CCGACCTCGAAATCGCCTGCAATCGCGACGGCCGCATTCTCGCGATCCGCGCCCGGATGCAGATGAACATCGGCGCGTAT TTCCGCACCTCGACAACGATCGCGCCGCGCAATGTCGGGCAGTTCATGCCCGGCGCCTATCGCGTGCCGCGCTATCGCGC CGACGTCGCGGTGATCGCGTCGAACAAATCGCCGGCCGGCACCTATCGCGGTCCGGGGCGATTCGAGTCGGATTTCTTCC GCGAGCGAATGTTCGATCTCACCGCCGATGACCTCGGCATCGATCGCGTCGAATTCCGCCGCCGCAATCTGCTAACGCCG GAGGAACTGCCGCTGGCGTTTCCGGCGATTGCTCCGAACCCGGTCGTCACCGAACTCGACAGCGGTGCCTATGAAAAGGT GCTCGATCTCTGCCTCGCCAAAGCGGGCTGGGCCGACAAGCAGCATCTGCAGGGGAAGCTCGTCGACGGCCGCTATCACG GCCTCGCGGTCGGCTGTTTCGTCGAGGGCGGCGCCGCCGGTCCGCGCGAAAGTGCGCGCATGGTGCTGGAAAGCGACGGC ACGATCTCGCTCTATGTCGGCTCTTCGGCGGTCGGGCAGGGCGTCGAGACCATCCTGATGCAGATCGCCGCCGATGCGAT GGACCTGCCGCTCAAGGCGATCCGCGTCTTTCACGGCTCGACGACTTATGTGAAGGAAGGCTGGGGATCCTATCACTCGC GTTCCACGGTGATGGGCGGCAACGCCGTGCTGCTCGCCGCAGCGGAGATCAAGGCACAGCTGCTGACGGCCGGCGCCGGC CTGCTGCAATGCGCCGAGCAGGAGGTCAGCTATCAGGCCGGGCGCGTCGCCGCGCAGCACGGCGGGTCGGTCGGGCTGAA GGAACTGGCGGCGAAGGGCATCGCCTTCGAGGCGACGTTTCACAACACCAAGCACACCTACACCTATGGCAGCCACGTCG CGCATGTCGCGGTCGATGCCGAGACCGGACATATCGAGATCGTCGACTACGTCGCCATCGAGGATGCCGGCCGCATCATC AATCCGCTGACGCTGCACGGCCAGGCGATCGGCTCGATCGTGCAGGGGCTCGGCGGCACGCTGCTCGAGCACTTCGTGTA CGACGACGAGGGGCAGATGCTGTCGGGCTCGCTGGCCGACTATCTGGTTCCGCTCGCGACCGACTATCCCAACATCCGCT CGTCGTCGATCGAGATGTGTCCGTCGCCGAACCATCCGCTTGGTGCCAAGGGCGCCGGCGAAGGCGGGACGATTCCGGTC GGCGGGATTCTGGCGAATGCGGTCGCGGCGGCGCTGCGCGATTTTGACGTGCAGCCGAAGGCGCTGCCGCTATCTCCGGA CCGGATCTGGCGGCTTGTGCAAGCTGCCGCAGCGCGCCCTGCTTAG
Upstream 100 bases:
>100_bases TGCTGTCCGGCAATGTCTGCCGCTGCACCGGCTATCTGTCGATTGTGAAAGCCGTGATGGAAGCGCGACCGGCCTATCAG CGTGAGCAGGGAGTGGGGGC
Downstream 100 bases:
>100_bases CGAGGCGGCTAGCCGGATACTTCCGCTCTGCGGGGCCCGGTGCCCTGCTTGCGGCAGGATGACGCCCGTCTACTGATCGA GCGGCCTCATTCTTCGTACC
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MNERVPLVGQPIERVEDPKLLRGLGSFVDDVHRDGMLHAAILRSSVAHGVIRRIDVTAARAMPGVHAVYTAEDIGAVPRI PVRLFPNEAMEPFRQPVIADGKVRFVGEPMAIVIADTPALAEDALELIEADIDPLPAVTRFEDEVAHDALLFEAHGSNRV FDYEVSRGEIDDTFETAPYTRRERLYVHRHTGITMETRGVVSEWDAAAGRMTSWGATKVPFANRKILAGMLDLPEEQVVM IEGNAGGSFGVRGEFFPEDFLVPFAARKIGRPVKWIEDRREHLLAVTHSRDVAADLEIACNRDGRILAIRARMQMNIGAY FRTSTTIAPRNVGQFMPGAYRVPRYRADVAVIASNKSPAGTYRGPGRFESDFFRERMFDLTADDLGIDRVEFRRRNLLTP EELPLAFPAIAPNPVVTELDSGAYEKVLDLCLAKAGWADKQHLQGKLVDGRYHGLAVGCFVEGGAAGPRESARMVLESDG TISLYVGSSAVGQGVETILMQIAADAMDLPLKAIRVFHGSTTYVKEGWGSYHSRSTVMGGNAVLLAAAEIKAQLLTAGAG LLQCAEQEVSYQAGRVAAQHGGSVGLKELAAKGIAFEATFHNTKHTYTYGSHVAHVAVDAETGHIEIVDYVAIEDAGRII NPLTLHGQAIGSIVQGLGGTLLEHFVYDDEGQMLSGSLADYLVPLATDYPNIRSSSIEMCPSPNHPLGAKGAGEGGTIPV GGILANAVAAALRDFDVQPKALPLSPDRIWRLVQAAAARPA
Sequences:
>Translated_761_residues MNERVPLVGQPIERVEDPKLLRGLGSFVDDVHRDGMLHAAILRSSVAHGVIRRIDVTAARAMPGVHAVYTAEDIGAVPRI PVRLFPNEAMEPFRQPVIADGKVRFVGEPMAIVIADTPALAEDALELIEADIDPLPAVTRFEDEVAHDALLFEAHGSNRV FDYEVSRGEIDDTFETAPYTRRERLYVHRHTGITMETRGVVSEWDAAAGRMTSWGATKVPFANRKILAGMLDLPEEQVVM IEGNAGGSFGVRGEFFPEDFLVPFAARKIGRPVKWIEDRREHLLAVTHSRDVAADLEIACNRDGRILAIRARMQMNIGAY FRTSTTIAPRNVGQFMPGAYRVPRYRADVAVIASNKSPAGTYRGPGRFESDFFRERMFDLTADDLGIDRVEFRRRNLLTP EELPLAFPAIAPNPVVTELDSGAYEKVLDLCLAKAGWADKQHLQGKLVDGRYHGLAVGCFVEGGAAGPRESARMVLESDG TISLYVGSSAVGQGVETILMQIAADAMDLPLKAIRVFHGSTTYVKEGWGSYHSRSTVMGGNAVLLAAAEIKAQLLTAGAG LLQCAEQEVSYQAGRVAAQHGGSVGLKELAAKGIAFEATFHNTKHTYTYGSHVAHVAVDAETGHIEIVDYVAIEDAGRII NPLTLHGQAIGSIVQGLGGTLLEHFVYDDEGQMLSGSLADYLVPLATDYPNIRSSSIEMCPSPNHPLGAKGAGEGGTIPV GGILANAVAAALRDFDVQPKALPLSPDRIWRLVQAAAARPA >Mature_761_residues MNERVPLVGQPIERVEDPKLLRGLGSFVDDVHRDGMLHAAILRSSVAHGVIRRIDVTAARAMPGVHAVYTAEDIGAVPRI PVRLFPNEAMEPFRQPVIADGKVRFVGEPMAIVIADTPALAEDALELIEADIDPLPAVTRFEDEVAHDALLFEAHGSNRV FDYEVSRGEIDDTFETAPYTRRERLYVHRHTGITMETRGVVSEWDAAAGRMTSWGATKVPFANRKILAGMLDLPEEQVVM IEGNAGGSFGVRGEFFPEDFLVPFAARKIGRPVKWIEDRREHLLAVTHSRDVAADLEIACNRDGRILAIRARMQMNIGAY FRTSTTIAPRNVGQFMPGAYRVPRYRADVAVIASNKSPAGTYRGPGRFESDFFRERMFDLTADDLGIDRVEFRRRNLLTP EELPLAFPAIAPNPVVTELDSGAYEKVLDLCLAKAGWADKQHLQGKLVDGRYHGLAVGCFVEGGAAGPRESARMVLESDG TISLYVGSSAVGQGVETILMQIAADAMDLPLKAIRVFHGSTTYVKEGWGSYHSRSTVMGGNAVLLAAAEIKAQLLTAGAG LLQCAEQEVSYQAGRVAAQHGGSVGLKELAAKGIAFEATFHNTKHTYTYGSHVAHVAVDAETGHIEIVDYVAIEDAGRII NPLTLHGQAIGSIVQGLGGTLLEHFVYDDEGQMLSGSLADYLVPLATDYPNIRSSSIEMCPSPNHPLGAKGAGEGGTIPV GGILANAVAAALRDFDVQPKALPLSPDRIWRLVQAAAARPA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=740, Percent_Identity=23.7837837837838, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI71773480, Length=776, Percent_Identity=23.9690721649485, Blast_Score=137, Evalue=3e-32, Organism=Escherichia coli, GI1789230, Length=770, Percent_Identity=27.5324675324675, Blast_Score=225, Evalue=8e-60, Organism=Escherichia coli, GI1789246, Length=799, Percent_Identity=24.5306633291614, Blast_Score=200, Evalue=4e-52, Organism=Escherichia coli, GI1786478, Length=774, Percent_Identity=26.2273901808786, Blast_Score=160, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17539860, Length=786, Percent_Identity=20.4834605597964, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI32566215, Length=700, Percent_Identity=20.1428571428571, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI17737937, Length=727, Percent_Identity=24.0715268225585, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI24647193, Length=782, Percent_Identity=21.7391304347826, Blast_Score=104, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 82294; Mature: 82294
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERVPLVGQPIERVEDPKLLRGLGSFVDDVHRDGMLHAAILRSSVAHGVIRRIDVTAAR CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AMPGVHAVYTAEDIGAVPRIPVRLFPNEAMEPFRQPVIADGKVRFVGEPMAIVIADTPAL CCCCCEEEEEHHHCCCCCCCCEEECCCHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHH AEDALELIEADIDPLPAVTRFEDEVAHDALLFEAHGSNRVFDYEVSRGEIDDTFETAPYT HHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC RRERLYVHRHTGITMETRGVVSEWDAAAGRMTSWGATKVPFANRKILAGMLDLPEEQVVM CCCEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE IEGNAGGSFGVRGEFFPEDFLVPFAARKIGRPVKWIEDRREHLLAVTHSRDVAADLEIAC EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCEEEEE NRDGRILAIRARMQMNIGAYFRTSTTIAPRNVGQFMPGAYRVPRYRADVAVIASNKSPAG CCCCCEEEEEEEEEECCCEEEEECCEECCCCHHHCCCCCCCCCCEECCEEEEECCCCCCC TYRGPGRFESDFFRERMFDLTADDLGIDRVEFRRRNLLTPEELPLAFPAIAPNPVVTELD CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHCCEECCCCCCCCCEECCC SGAYEKVLDLCLAKAGWADKQHLQGKLVDGRYHGLAVGCFVEGGAAGPRESARMVLESDG CCHHHHHHHHHHHHCCCCCCHHCCCEEECCEECCEEEEEEEECCCCCCCHHCEEEEECCC TISLYVGSSAVGQGVETILMQIAADAMDLPLKAIRVFHGSTTYVKEGWGSYHSRSTVMGG EEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCCCCEEECC NAVLLAAAEIKAQLLTAGAGLLQCAEQEVSYQAGRVAAQHGGSVGLKELAAKGIAFEATF CEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEE HNTKHTYTYGSHVAHVAVDAETGHIEIVDYVAIEDAGRIINPLTLHGQAIGSIVQGLGGT CCCCEEEEECCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHH LLEHFVYDDEGQMLSGSLADYLVPLATDYPNIRSSSIEMCPSPNHPLGAKGAGEGGTIPV HHHHHEECCCCCEECCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCH GGILANAVAAALRDFDVQPKALPLSPDRIWRLVQAAAARPA HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNERVPLVGQPIERVEDPKLLRGLGSFVDDVHRDGMLHAAILRSSVAHGVIRRIDVTAAR CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AMPGVHAVYTAEDIGAVPRIPVRLFPNEAMEPFRQPVIADGKVRFVGEPMAIVIADTPAL CCCCCEEEEEHHHCCCCCCCCEEECCCHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHH AEDALELIEADIDPLPAVTRFEDEVAHDALLFEAHGSNRVFDYEVSRGEIDDTFETAPYT HHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC RRERLYVHRHTGITMETRGVVSEWDAAAGRMTSWGATKVPFANRKILAGMLDLPEEQVVM CCCEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE IEGNAGGSFGVRGEFFPEDFLVPFAARKIGRPVKWIEDRREHLLAVTHSRDVAADLEIAC EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCEEEEE NRDGRILAIRARMQMNIGAYFRTSTTIAPRNVGQFMPGAYRVPRYRADVAVIASNKSPAG CCCCCEEEEEEEEEECCCEEEEECCEECCCCHHHCCCCCCCCCCEECCEEEEECCCCCCC TYRGPGRFESDFFRERMFDLTADDLGIDRVEFRRRNLLTPEELPLAFPAIAPNPVVTELD CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHCCEECCCCCCCCCEECCC SGAYEKVLDLCLAKAGWADKQHLQGKLVDGRYHGLAVGCFVEGGAAGPRESARMVLESDG CCHHHHHHHHHHHHCCCCCCHHCCCEEECCEECCEEEEEEEECCCCCCCHHCEEEEECCC TISLYVGSSAVGQGVETILMQIAADAMDLPLKAIRVFHGSTTYVKEGWGSYHSRSTVMGG EEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCCCCEEECC NAVLLAAAEIKAQLLTAGAGLLQCAEQEVSYQAGRVAAQHGGSVGLKELAAKGIAFEATF CEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEE HNTKHTYTYGSHVAHVAVDAETGHIEIVDYVAIEDAGRIINPLTLHGQAIGSIVQGLGGT CCCCEEEEECCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHH LLEHFVYDDEGQMLSGSLADYLVPLATDYPNIRSSSIEMCPSPNHPLGAKGAGEGGTIPV HHHHHEECCCCCEECCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCH GGILANAVAAALRDFDVQPKALPLSPDRIWRLVQAAAARPA HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]