Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750187

Identifier: 86750187

GI number: 86750187

Start: 3503523

End: 3503975

Strand: Reverse

Name: 86750187

Synonym: RPB_3071

Alternate gene names: NA

Gene position: 3503975-3503523 (Counterclockwise)

Preceding gene: 86750188

Following gene: 86750186

Centisome position: 65.72

GC content: 67.11

Gene sequence:

>453_bases
ATGCCGTCGTTGCGGCGAAGCACGCGCATCATAGCGCTCGTAGCGGCGTTGATCGGAGCGGCGCCGGGGGCGTTGCATGC
CCAGAGCGCAATCGCGTGCCCGGAGCGGTTGCAGACACTTTCGGTGACGCTCGCGAAGCCTGAGCAGATCGCCGGCTTCA
CGCCGGTGATCGGCGGCGACACCTCGTCGCAAACCTGGCTGCAGGACGTCGCGGTGTTCGGCCGGACCGCCGGTCAGACC
GTGCTCGTGCCGGGGACCCCCAAAGGAAAGAAACGTCTCGACTGGCGGTTCGACGGGCAGATCGAGGTCTGGATCGGTTG
CGTGTACGAGGCCGGCGTCACGCTGCACCGGTCCGTCGGACGGCCGAAGAGCTGCACCGCGGCGATCCTGCGCAGCAAGG
ATCCAGGCGGCGGCAGCTGGGGCATGGATCTGGCATCCTTCAAATGCAACTGA

Upstream 100 bases:

>100_bases
ATTTCCAACTCGGAAACGTCCGCCGCGTGGTGCAAGATCTGGGAGCCTGCACGATGCAGAGCGGTGAGCACTGAGCCTGT
CGGTCAGAGTTGGAGGAGCG

Downstream 100 bases:

>100_bases
CAGCATCGATGAAATGCACAAACGGTTTCGCGGCACTAGCCGCGACCGTCGTTCTTGGCGGCCTGTCGGCCAAAGCGGAC
GAGGTCAACTGGCAGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGDTSSQTWLQDVAVFGRTAGQT
VLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVGRPKSCTAAILRSKDPGGGSWGMDLASFKCN

Sequences:

>Translated_150_residues
MPSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGDTSSQTWLQDVAVFGRTAGQT
VLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVGRPKSCTAAILRSKDPGGGSWGMDLASFKCN
>Mature_149_residues
PSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGDTSSQTWLQDVAVFGRTAGQTV
LVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVGRPKSCTAAILRSKDPGGGSWGMDLASFKCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15843; Mature: 15712

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGD
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHEEEEEEECCHHHCCCCCEECCC
TSSQTWLQDVAVFGRTAGQTVLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVG
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEEEEEECCCEEEECCCC
RPKSCTAAILRSKDPGGGSWGMDLASFKCN
CCCHHHHHHHHCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
PSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGD
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHEEEEEEECCHHHCCCCCEECCC
TSSQTWLQDVAVFGRTAGQTVLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVG
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEEEEEECCCEEEECCCC
RPKSCTAAILRSKDPGGGSWGMDLASFKCN
CCCHHHHHHHHCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA