| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750187
Identifier: 86750187
GI number: 86750187
Start: 3503523
End: 3503975
Strand: Reverse
Name: 86750187
Synonym: RPB_3071
Alternate gene names: NA
Gene position: 3503975-3503523 (Counterclockwise)
Preceding gene: 86750188
Following gene: 86750186
Centisome position: 65.72
GC content: 67.11
Gene sequence:
>453_bases ATGCCGTCGTTGCGGCGAAGCACGCGCATCATAGCGCTCGTAGCGGCGTTGATCGGAGCGGCGCCGGGGGCGTTGCATGC CCAGAGCGCAATCGCGTGCCCGGAGCGGTTGCAGACACTTTCGGTGACGCTCGCGAAGCCTGAGCAGATCGCCGGCTTCA CGCCGGTGATCGGCGGCGACACCTCGTCGCAAACCTGGCTGCAGGACGTCGCGGTGTTCGGCCGGACCGCCGGTCAGACC GTGCTCGTGCCGGGGACCCCCAAAGGAAAGAAACGTCTCGACTGGCGGTTCGACGGGCAGATCGAGGTCTGGATCGGTTG CGTGTACGAGGCCGGCGTCACGCTGCACCGGTCCGTCGGACGGCCGAAGAGCTGCACCGCGGCGATCCTGCGCAGCAAGG ATCCAGGCGGCGGCAGCTGGGGCATGGATCTGGCATCCTTCAAATGCAACTGA
Upstream 100 bases:
>100_bases ATTTCCAACTCGGAAACGTCCGCCGCGTGGTGCAAGATCTGGGAGCCTGCACGATGCAGAGCGGTGAGCACTGAGCCTGT CGGTCAGAGTTGGAGGAGCG
Downstream 100 bases:
>100_bases CAGCATCGATGAAATGCACAAACGGTTTCGCGGCACTAGCCGCGACCGTCGTTCTTGGCGGCCTGTCGGCCAAAGCGGAC GAGGTCAACTGGCAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGDTSSQTWLQDVAVFGRTAGQT VLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVGRPKSCTAAILRSKDPGGGSWGMDLASFKCN
Sequences:
>Translated_150_residues MPSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGDTSSQTWLQDVAVFGRTAGQT VLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVGRPKSCTAAILRSKDPGGGSWGMDLASFKCN >Mature_149_residues PSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGDTSSQTWLQDVAVFGRTAGQTV LVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVGRPKSCTAAILRSKDPGGGSWGMDLASFKCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15843; Mature: 15712
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGD CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHEEEEEEECCHHHCCCCCEECCC TSSQTWLQDVAVFGRTAGQTVLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVG CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEEEEEECCCEEEECCCC RPKSCTAAILRSKDPGGGSWGMDLASFKCN CCCHHHHHHHHCCCCCCCCCCCCCCEEECC >Mature Secondary Structure PSLRRSTRIIALVAALIGAAPGALHAQSAIACPERLQTLSVTLAKPEQIAGFTPVIGGD CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHEEEEEEECCHHHCCCCCEECCC TSSQTWLQDVAVFGRTAGQTVLVPGTPKGKKRLDWRFDGQIEVWIGCVYEAGVTLHRSVG CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEEEEEECCCEEEECCCC RPKSCTAAILRSKDPGGGSWGMDLASFKCN CCCHHHHHHHHCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA