| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750186
Identifier: 86750186
GI number: 86750186
Start: 3502589
End: 3503146
Strand: Reverse
Name: 86750186
Synonym: RPB_3070
Alternate gene names: NA
Gene position: 3503146-3502589 (Counterclockwise)
Preceding gene: 86750187
Following gene: 86750185
Centisome position: 65.7
GC content: 63.98
Gene sequence:
>558_bases ATGGCCCGCATGATCATCTGTTGCACCTCAGTGCTTGCAATCGGCATCCTCGGCGGCGCTGTGCCCGCGCAAGCGCAGGA CGGCGGCGCGACGATCGCCTGTCCGCCGACGATCGAGCTGACATATACCGCGATCAAACGGCTGCCGTTCGAGGGCAAGG AATACGATCTGAACGGTATGCAGCCGAGCTTCGGGCCCACTATCGTCCGGCTGATCGATCCAGATGTCACACCGCTGGCG GACAACAAGAACGAGATGATGAGCGGCATGGCCGACAACGGCGAAGAGGCGAAGGCCGGCGAACCGTTGGTTTACACATT GTGGGGCGAGGGCCAGCCGGCCCCGGAGTCGCCGTCGGCGATCACCTGCCGCTACGAAGGCGGCTATGCGCTGCAGAAAG CACTGCCGGCCACCACCCGCGCCTGCACGCTGCGCTATCAGAGGGGCAAGTCGCCGGTGACCGACACACCACGCGCGAGC TCTACACCAGCGCGGTGTTTTCGTGCCGATGAAGCCCGTGTTACAGGCGTAGAGCTGCCAAGGAGGGCACCGAAATGA
Upstream 100 bases:
>100_bases CCTTGGGGCGGCAAGGAAATCCGCGTTACCACCTACATGTGCGACTGCAAGTATTCACCGGCGGTCGCGGCCGCCAGACC TGACCAGCCAGGAGCCGACC
Downstream 100 bases:
>100_bases GAGCTATGACCGCAACGACGATGCTCGCGGCGTGCGCGGGCCTGTTCGCCCTTTCGGTGGCCGGTCCCGCCGTCGCGGCG CCACGTCCAGCCGATTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MARMIICCTSVLAIGILGGAVPAQAQDGGATIACPPTIELTYTAIKRLPFEGKEYDLNGMQPSFGPTIVRLIDPDVTPLA DNKNEMMSGMADNGEEAKAGEPLVYTLWGEGQPAPESPSAITCRYEGGYALQKALPATTRACTLRYQRGKSPVTDTPRAS STPARCFRADEARVTGVELPRRAPK
Sequences:
>Translated_185_residues MARMIICCTSVLAIGILGGAVPAQAQDGGATIACPPTIELTYTAIKRLPFEGKEYDLNGMQPSFGPTIVRLIDPDVTPLA DNKNEMMSGMADNGEEAKAGEPLVYTLWGEGQPAPESPSAITCRYEGGYALQKALPATTRACTLRYQRGKSPVTDTPRAS STPARCFRADEARVTGVELPRRAPK >Mature_184_residues ARMIICCTSVLAIGILGGAVPAQAQDGGATIACPPTIELTYTAIKRLPFEGKEYDLNGMQPSFGPTIVRLIDPDVTPLAD NKNEMMSGMADNGEEAKAGEPLVYTLWGEGQPAPESPSAITCRYEGGYALQKALPATTRACTLRYQRGKSPVTDTPRASS TPARCFRADEARVTGVELPRRAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19717; Mature: 19586
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMIICCTSVLAIGILGGAVPAQAQDGGATIACPPTIELTYTAIKRLPFEGKEYDLNGM CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCEECCCCC QPSFGPTIVRLIDPDVTPLADNKNEMMSGMADNGEEAKAGEPLVYTLWGEGQPAPESPSA CCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE ITCRYEGGYALQKALPATTRACTLRYQRGKSPVTDTPRASSTPARCFRADEARVTGVELP EEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCEEECCCCC RRAPK CCCCC >Mature Secondary Structure ARMIICCTSVLAIGILGGAVPAQAQDGGATIACPPTIELTYTAIKRLPFEGKEYDLNGM CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCEECCCCC QPSFGPTIVRLIDPDVTPLADNKNEMMSGMADNGEEAKAGEPLVYTLWGEGQPAPESPSA CCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE ITCRYEGGYALQKALPATTRACTLRYQRGKSPVTDTPRASSTPARCFRADEARVTGVELP EEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCEEECCCCC RRAPK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA