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The map label for this gene is dcrA [H]

Identifier: 86750100

GI number: 86750100

Start: 3395824

End: 3397509

Strand: Reverse

Name: dcrA [H]

Synonym: RPB_2983

Alternate gene names: 86750100

Gene position: 3397509-3395824 (Counterclockwise)

Preceding gene: 86750104

Following gene: 86750099

Centisome position: 63.72

GC content: 66.13

Gene sequence:

>1686_bases
GTGAAACTTTCCAACGTCAAGATCCTCTACAAAATTCTCGCATGTTTTGTGCTGCTCAGCGTCGTGGTCGCGGGTGGCGT
CTGGTTCGCTGCGGCGAAAATGGGCGAGATCGAGCGGCTGTATGCCGAGATGCTGGACAGGGATGTGCAGAGCATGAAGG
CCAACATCCGGGCCAATGCGCGCGTCTACAATCTCGGTCGGCTGTCCTGGCGCGTGATCGCGGAGACCGATCAGGCCGAG
CTGCAGAAGGTCAGTCAGGAGGCCGCGGCGGCGCAGAGAGAATTCGTCGACTACATCGCCGAGGCCAAGAAGGGGCTTCC
CACCTATGCGGCGGATTTCGACCGCATCGTGCGGCAGTTCGAGGACGTCGTCGTGGCCAAATACGTACTCGTCGAGAAGG
CGGCCATGGCCAATCAGAAAGAAGCGGCCGTGAAGCTGGCGAAAAGCATGGGGGACGACAACCAGGCGTTGCGTGTGGCG
CAGACTGCGATCACAGTCCGTATCGACAAGGACATCCATGCGCGTCAGCAGGGCATTTCCGCCGACGTGGCGAGCGCCAT
CCGCCTCACCGTGCTGATGATCGGCGGCGCCTTCCTCGCGGTGCTGGCGATCGCCTTCGCGATCGTGCAGTTCGGCGTCG
CGCGTCCGATCGGGCGGCTGGTCGGCGATCTGCAGGCGATGGCCCGCGGTGAGACGGTCGTGATCTCTGGCACCGAGCGT
CGCGACGAAATCGGTCAGACTGCCAATGCCGTCGAAGGCATCAAGACGATGCTCGCCGACAAGGCGAAGCAGGAGGCCGA
AGCCAAGGTCGAGCAGGACCTCAAGCTCGCGGCGCAGCGCAAGCAGGACATGAACAAGCTGGCGCACGACTTCGAAGCCG
CGGTCGGCGAGGTGATCCAGACGGTGTCGTCGGCGTCGACCGAACTGGAAGCTTCCGCGACGACGCTGACCTCCAACGCG
CGCCACGCCCAGGAAGTGACGACAACGGTCGCGGCGGCGTCCGAGCAGGCCTCCGCCAACGTGCAGTCGGTGGCGTCCGC
GACCGAGGAGATGGCGTCGTCGGTGACCGAGATCAGCCGCCAGGTGCAGGAGTCCGCACGCATCGCCCGGGAAGCCGTGG
GCCAGGCGCAGATCACCAACGAGCGCGTCGGCGAATTGTCCACCGCCGCGGCGCGGATCGGCGACGTGGTCGACCTGATC
AACACCATCGCCGGCCAGACCAACCTGCTGGCGCTCAACGCCACCATCGAGGCGGCGCGCGCCGGCGATGCCGGGCGCGG
CTTCGCGGTGGTCGCCTCTGAGGTGAAGGCGCTCGCCGAACAGACCGCGAAGGCGACCGGCGAGATCAGCCAGCAGATCA
GCGGCATCCAGGCCGCGACCGATCAGTCGGTGTCGGCGATTCGGGAAATCGGCGCGACGATCGGCAAGATGTCCGAGATC
GCCTCGACCATCGCCTCGGCGGTGGAAGAGCAGGGCGCCGCGACGCAGGAGATTTCGCGCAACGTGCAGCAGGCGGCGCA
GGGCACCCAGCAGGTGTCGTCGAGCGTGATCGACGTCCAGCGCGGCGCCAGCGAAACCGGCTCGGCGTCGAGCCAGGTGC
TGTCGGCGGCGCAGTCGCTCGCCAACGACAGCAACCGCCTCAAGCTCGAAGTCGGCAAGTTCCTCGAGACCGTCCGCGCA
GCGTGA

Upstream 100 bases:

>100_bases
CGACCAATGGCGACGTCACCGGCTGAGCTGCCGACCGCCGTCGATAGCATCGACGTCCGCAATTGGGGCGTCGCCTGAAA
TCTCAACATGGGGCACGGCC

Downstream 100 bases:

>100_bases
GCGCGGACGTGGCGCGGACCTCCCCCAGGTCCGCGCCACCCCCAAGGCCGGATCGCCTGCGATGCGCCATTTTCGGTTGA
ACCCGCTTCGGGTTTTGACC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MKLSNVKILYKILACFVLLSVVVAGGVWFAAAKMGEIERLYAEMLDRDVQSMKANIRANARVYNLGRLSWRVIAETDQAE
LQKVSQEAAAAQREFVDYIAEAKKGLPTYAADFDRIVRQFEDVVVAKYVLVEKAAMANQKEAAVKLAKSMGDDNQALRVA
QTAITVRIDKDIHARQQGISADVASAIRLTVLMIGGAFLAVLAIAFAIVQFGVARPIGRLVGDLQAMARGETVVISGTER
RDEIGQTANAVEGIKTMLADKAKQEAEAKVEQDLKLAAQRKQDMNKLAHDFEAAVGEVIQTVSSASTELEASATTLTSNA
RHAQEVTTTVAAASEQASANVQSVASATEEMASSVTEISRQVQESARIAREAVGQAQITNERVGELSTAAARIGDVVDLI
NTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEISQQISGIQAATDQSVSAIREIGATIGKMSEI
ASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSSVIDVQRGASETGSASSQVLSAAQSLANDSNRLKLEVGKFLETVRA
A

Sequences:

>Translated_561_residues
MKLSNVKILYKILACFVLLSVVVAGGVWFAAAKMGEIERLYAEMLDRDVQSMKANIRANARVYNLGRLSWRVIAETDQAE
LQKVSQEAAAAQREFVDYIAEAKKGLPTYAADFDRIVRQFEDVVVAKYVLVEKAAMANQKEAAVKLAKSMGDDNQALRVA
QTAITVRIDKDIHARQQGISADVASAIRLTVLMIGGAFLAVLAIAFAIVQFGVARPIGRLVGDLQAMARGETVVISGTER
RDEIGQTANAVEGIKTMLADKAKQEAEAKVEQDLKLAAQRKQDMNKLAHDFEAAVGEVIQTVSSASTELEASATTLTSNA
RHAQEVTTTVAAASEQASANVQSVASATEEMASSVTEISRQVQESARIAREAVGQAQITNERVGELSTAAARIGDVVDLI
NTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEISQQISGIQAATDQSVSAIREIGATIGKMSEI
ASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSSVIDVQRGASETGSASSQVLSAAQSLANDSNRLKLEVGKFLETVRA
A
>Mature_561_residues
MKLSNVKILYKILACFVLLSVVVAGGVWFAAAKMGEIERLYAEMLDRDVQSMKANIRANARVYNLGRLSWRVIAETDQAE
LQKVSQEAAAAQREFVDYIAEAKKGLPTYAADFDRIVRQFEDVVVAKYVLVEKAAMANQKEAAVKLAKSMGDDNQALRVA
QTAITVRIDKDIHARQQGISADVASAIRLTVLMIGGAFLAVLAIAFAIVQFGVARPIGRLVGDLQAMARGETVVISGTER
RDEIGQTANAVEGIKTMLADKAKQEAEAKVEQDLKLAAQRKQDMNKLAHDFEAAVGEVIQTVSSASTELEASATTLTSNA
RHAQEVTTTVAAASEQASANVQSVASATEEMASSVTEISRQVQESARIAREAVGQAQITNERVGELSTAAARIGDVVDLI
NTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEISQQISGIQAATDQSVSAIREIGATIGKMSEI
ASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSSVIDVQRGASETGSASSQVLSAAQSLANDSNRLKLEVGKFLETVRA
A

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=334, Percent_Identity=27.2455089820359, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787690, Length=373, Percent_Identity=27.0777479892761, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788195, Length=253, Percent_Identity=31.6205533596838, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788194, Length=197, Percent_Identity=34.010152284264, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789453, Length=325, Percent_Identity=27.0769230769231, Blast_Score=83, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 59262; Mature: 59262

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNVKILYKILACFVLLSVVVAGGVWFAAAKMGEIERLYAEMLDRDVQSMKANIRANA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVYNLGRLSWRVIAETDQAELQKVSQEAAAAQREFVDYIAEAKKGLPTYAADFDRIVRQF
EEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EDVVVAKYVLVEKAAMANQKEAAVKLAKSMGDDNQALRVAQTAITVRIDKDIHARQQGIS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCHHHHHHHCCH
ADVASAIRLTVLMIGGAFLAVLAIAFAIVQFGVARPIGRLVGDLQAMARGETVVISGTER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHH
RDEIGQTANAVEGIKTMLADKAKQEAEAKVEQDLKLAAQRKQDMNKLAHDFEAAVGEVIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVSSASTELEASATTLTSNARHAQEVTTTVAAASEQASANVQSVASATEEMASSVTEISR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVQESARIAREAVGQAQITNERVGELSTAAARIGDVVDLINTIAGQTNLLALNATIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
AGDAGRGFAVVASEVKALAEQTAKATGEISQQISGIQAATDQSVSAIREIGATIGKMSEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSSVIDVQRGASETGSASSQVLSAAQSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ANDSNRLKLEVGKFLETVRAA
CCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MKLSNVKILYKILACFVLLSVVVAGGVWFAAAKMGEIERLYAEMLDRDVQSMKANIRANA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVYNLGRLSWRVIAETDQAELQKVSQEAAAAQREFVDYIAEAKKGLPTYAADFDRIVRQF
EEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EDVVVAKYVLVEKAAMANQKEAAVKLAKSMGDDNQALRVAQTAITVRIDKDIHARQQGIS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCHHHHHHHCCH
ADVASAIRLTVLMIGGAFLAVLAIAFAIVQFGVARPIGRLVGDLQAMARGETVVISGTER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHH
RDEIGQTANAVEGIKTMLADKAKQEAEAKVEQDLKLAAQRKQDMNKLAHDFEAAVGEVIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVSSASTELEASATTLTSNARHAQEVTTTVAAASEQASANVQSVASATEEMASSVTEISR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVQESARIAREAVGQAQITNERVGELSTAAARIGDVVDLINTIAGQTNLLALNATIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
AGDAGRGFAVVASEVKALAEQTAKATGEISQQISGIQAATDQSVSAIREIGATIGKMSEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSSVIDVQRGASETGSASSQVLSAAQSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ANDSNRLKLEVGKFLETVRAA
CCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]