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The map label for this gene is 86750099

Identifier: 86750099

GI number: 86750099

Start: 3394162

End: 3395670

Strand: Reverse

Name: 86750099

Synonym: RPB_2982

Alternate gene names: NA

Gene position: 3395670-3394162 (Counterclockwise)

Preceding gene: 86750100

Following gene: 86750094

Centisome position: 63.69

GC content: 68.39

Gene sequence:

>1509_bases
ATGCGATCGCTGGCGCGGTGGGGACTATCGGCGATCGGGATGATCGCCGCGGTGCTGATCGGCAGCGCGCCCGCCGAGGC
CGCCAAGCGCGTCGCGCTGGTGGTCGGCAACAACGATTATCGCAACGTTCCGAAGCTGCAGAAAGCGGTGAACGACGCCC
GCACCATGGGCGACGCGCTGCGCACGCTCGGCTTTCAGGTGATGGTGGCGGAGAATCAGAACCGCACGGCATTCAGCCAG
AGCCTGCTGGCGTTCGATCAGGCGATCGAGCCCGGCGACACAGCGTTCTTCTTCTACGCCGGCCACGGTTTCGAAATTTC
CGGCCAGAACTTCCTGCTGCCGACCGATGTGCCGGCGGCGACCGAAGGCCAGGAGGAGCTGGTCCGCGACGCCTCGGTGC
TCGCCGACCGCATCGTCGAGCGGCTGCAGAATCGCGGCGCGCGCACTGCGATCCTGGTGTTCGACGCCTGCCGCAACAAT
CCGTTCGAGCGCCGCGGCGTCCGCGCGCTGAGTGGCCGCGGCGGGCTGGCGCCGATGACGACGCTGCCCGAGGGCGTGTT
CTCGGTGTTCTCGGCCGGGCCGCGGCAGACCGCGCTCGACCGGCTGTCGGACACCGACGCCGATCCGAATTCGGTGTTCA
CCCGGGTGTTCGCCAAGCAACTGCTCGATCCCGGCGAGAACCTGGTGCAGGTCGCGCAGCGGACGCGCCGCGCCGTCAGC
GAGATGGCCGACACCGTCGGCCATCGGCAGGTGCCGGTGTATTTCGACCAGATGGTCGACGACGTGTTTCTGAACGGCGC
GGCGAAGCCCGCCGCAGCCGCGGCCGCGCCGGTAGCGTCCGCCGCGCCGCCGCAGAAGGTCGCCGCGCTGCCGCCGGTGG
CGCCGCTGAAGCCGCCGACCTCGGAGAGTCTCAACGCGCCGATCGCCAGCTTCTCCCGCCACAATGGCGGCTGGACCGTG
GTGTTCTCGATCGCTGATCCGACGCTCGGCATCTCCTGGCGGCTCGGCGACAGCGGCGAGTTCCGCGAGACCGGCTTCAT
GGACACGCTCGATCCGCGCACCCGCAAGCGGATGCCGAACCCGTCGATCCAGCTCCCCGCCGATGCCCAGGCCTCGACCA
TCGAGGTGCGCTATGTCGATGCGCTCGGCGAGACGCAGGGGCCGTTTCCGATCCGGTTCGAGCCGGAGGCTGCATTGCTG
CGCGACCAGCGCAAGATCCTCGACATGACCGCGACGAGCTGGCTGTCGTTTCGCGACTACAACGGCCTGCTGGTCTACTA
CACGCATCTGATGTCGTATCGCTGCGCGATCCGCGAGGTGAGGATCGGCATCGACAGCGCGGTGCCCGACAAGGTGCTGA
AACTGCCCGCCTGCGACCTGCGCGACCCGGTCGCGATCCCGAGCAGCGCCACGCCCTATCTGAAATTGTCGCCCGGCGTG
AAGTCGGTGTCGGTCGAACTGACCTATCGCGACGGCTCGGTGTCGGAGATCAAGACGTTCCGGCGGTGA

Upstream 100 bases:

>100_bases
CGCCTGCGATGCGCCATTTTCGGTTGAACCCGCTTCGGGTTTTGACCGACTATGGCGCAGGCGGCGCGATCCGGCCGTCT
TGCTGTTCGGGGACTTCTGA

Downstream 100 bases:

>100_bases
GGGGGTGGAAAGCCGGGTAGGGTGGGCAAAGGCGCGCAGCGCCGTGCCCACGCGTGATCCGGCAAAATCGCTCGTCGCGC
GTGGGCTTCGCTGCGCTCAG

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-Like Domain-Containing Protein; Caspase-1 P; ICE-Like Protease

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MRSLARWGLSAIGMIAAVLIGSAPAEAAKRVALVVGNNDYRNVPKLQKAVNDARTMGDALRTLGFQVMVAENQNRTAFSQ
SLLAFDQAIEPGDTAFFFYAGHGFEISGQNFLLPTDVPAATEGQEELVRDASVLADRIVERLQNRGARTAILVFDACRNN
PFERRGVRALSGRGGLAPMTTLPEGVFSVFSAGPRQTALDRLSDTDADPNSVFTRVFAKQLLDPGENLVQVAQRTRRAVS
EMADTVGHRQVPVYFDQMVDDVFLNGAAKPAAAAAAPVASAAPPQKVAALPPVAPLKPPTSESLNAPIASFSRHNGGWTV
VFSIADPTLGISWRLGDSGEFRETGFMDTLDPRTRKRMPNPSIQLPADAQASTIEVRYVDALGETQGPFPIRFEPEAALL
RDQRKILDMTATSWLSFRDYNGLLVYYTHLMSYRCAIREVRIGIDSAVPDKVLKLPACDLRDPVAIPSSATPYLKLSPGV
KSVSVELTYRDGSVSEIKTFRR

Sequences:

>Translated_502_residues
MRSLARWGLSAIGMIAAVLIGSAPAEAAKRVALVVGNNDYRNVPKLQKAVNDARTMGDALRTLGFQVMVAENQNRTAFSQ
SLLAFDQAIEPGDTAFFFYAGHGFEISGQNFLLPTDVPAATEGQEELVRDASVLADRIVERLQNRGARTAILVFDACRNN
PFERRGVRALSGRGGLAPMTTLPEGVFSVFSAGPRQTALDRLSDTDADPNSVFTRVFAKQLLDPGENLVQVAQRTRRAVS
EMADTVGHRQVPVYFDQMVDDVFLNGAAKPAAAAAAPVASAAPPQKVAALPPVAPLKPPTSESLNAPIASFSRHNGGWTV
VFSIADPTLGISWRLGDSGEFRETGFMDTLDPRTRKRMPNPSIQLPADAQASTIEVRYVDALGETQGPFPIRFEPEAALL
RDQRKILDMTATSWLSFRDYNGLLVYYTHLMSYRCAIREVRIGIDSAVPDKVLKLPACDLRDPVAIPSSATPYLKLSPGV
KSVSVELTYRDGSVSEIKTFRR
>Mature_502_residues
MRSLARWGLSAIGMIAAVLIGSAPAEAAKRVALVVGNNDYRNVPKLQKAVNDARTMGDALRTLGFQVMVAENQNRTAFSQ
SLLAFDQAIEPGDTAFFFYAGHGFEISGQNFLLPTDVPAATEGQEELVRDASVLADRIVERLQNRGARTAILVFDACRNN
PFERRGVRALSGRGGLAPMTTLPEGVFSVFSAGPRQTALDRLSDTDADPNSVFTRVFAKQLLDPGENLVQVAQRTRRAVS
EMADTVGHRQVPVYFDQMVDDVFLNGAAKPAAAAAAPVASAAPPQKVAALPPVAPLKPPTSESLNAPIASFSRHNGGWTV
VFSIADPTLGISWRLGDSGEFRETGFMDTLDPRTRKRMPNPSIQLPADAQASTIEVRYVDALGETQGPFPIRFEPEAALL
RDQRKILDMTATSWLSFRDYNGLLVYYTHLMSYRCAIREVRIGIDSAVPDKVLKLPACDLRDPVAIPSSATPYLKLSPGV
KSVSVELTYRDGSVSEIKTFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25149817, Length=132, Percent_Identity=28.030303030303, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54535; Mature: 54535

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLARWGLSAIGMIAAVLIGSAPAEAAKRVALVVGNNDYRNVPKLQKAVNDARTMGDAL
CCCHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
RTLGFQVMVAENQNRTAFSQSLLAFDQAIEPGDTAFFFYAGHGFEISGQNFLLPTDVPAA
HHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCEEECCCCCCCC
TEGQEELVRDASVLADRIVERLQNRGARTAILVFDACRNNPFERRGVRALSGRGGLAPMT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCEECCCCCCCCHH
TLPEGVFSVFSAGPRQTALDRLSDTDADPNSVFTRVFAKQLLDPGENLVQVAQRTRRAVS
HCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EMADTVGHRQVPVYFDQMVDDVFLNGAAKPAAAAAAPVASAAPPQKVAALPPVAPLKPPT
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCCCC
SESLNAPIASFSRHNGGWTVVFSIADPTLGISWRLGDSGEFRETGFMDTLDPRTRKRMPN
CCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCC
PSIQLPADAQASTIEVRYVDALGETQGPFPIRFEPEAALLRDQRKILDMTATSWLSFRDY
CCEECCCCCCCCEEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEECCC
NGLLVYYTHLMSYRCAIREVRIGIDSAVPDKVLKLPACDLRDPVAIPSSATPYLKLSPGV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCC
KSVSVELTYRDGSVSEIKTFRR
EEEEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure
MRSLARWGLSAIGMIAAVLIGSAPAEAAKRVALVVGNNDYRNVPKLQKAVNDARTMGDAL
CCCHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
RTLGFQVMVAENQNRTAFSQSLLAFDQAIEPGDTAFFFYAGHGFEISGQNFLLPTDVPAA
HHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCEEECCCCCCCC
TEGQEELVRDASVLADRIVERLQNRGARTAILVFDACRNNPFERRGVRALSGRGGLAPMT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCEECCCCCCCCHH
TLPEGVFSVFSAGPRQTALDRLSDTDADPNSVFTRVFAKQLLDPGENLVQVAQRTRRAVS
HCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EMADTVGHRQVPVYFDQMVDDVFLNGAAKPAAAAAAPVASAAPPQKVAALPPVAPLKPPT
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCCCC
SESLNAPIASFSRHNGGWTVVFSIADPTLGISWRLGDSGEFRETGFMDTLDPRTRKRMPN
CCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCC
PSIQLPADAQASTIEVRYVDALGETQGPFPIRFEPEAALLRDQRKILDMTATSWLSFRDY
CCEECCCCCCCCEEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEECCC
NGLLVYYTHLMSYRCAIREVRIGIDSAVPDKVLKLPACDLRDPVAIPSSATPYLKLSPGV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCC
KSVSVELTYRDGSVSEIKTFRR
EEEEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA