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The map label for this gene is yjjB [C]

Identifier: 86750043

GI number: 86750043

Start: 3339826

End: 3340305

Strand: Reverse

Name: yjjB [C]

Synonym: RPB_2926

Alternate gene names: 86750043

Gene position: 3340305-3339826 (Counterclockwise)

Preceding gene: 86750044

Following gene: 86750042

Centisome position: 62.65

GC content: 69.58

Gene sequence:

>480_bases
GTGAGCAATGAACTGATCGCCATGCTTGCTCACCTCGCGCATCAGGCCGCGTTCGGCGCTGTCGCTGCCGCCGGCTTCGG
CGTGCTGTTCAATTTCGGCTGGCGCTCGCTGGCGTGGTGCGCGGTCGCCGGCGCGCTGGCGCTCGGCATCCGCACCTTCA
GCCAGACATCCGGTGCCAGCCTCGAGGCCGCGACCTTCCTCGCCGCGATCGGCACCTCCTGCATCGCGATCCTGGCGCGG
CGCTGGCTCGGCGTCGCCTGCAACGCCATCGCGCTCGCCGGCTGCATCCCGATGGTGCCGGGCGCGTTTTTCGGCCAGGC
GATGATCGGCTACATCTCGGTCGCCGCCGATACGTCGGGGCAGTCGGTCGAACAGCTCGTCGCGTCGGCCCAGGCTTTCA
TTCGCGTCGTCTCCATCGTCGGCGCGATCGGCGCGGGGCTGGCGATCCCGGCCTATCTGTTGCGGAGCCGGCAGTTCTGA

Upstream 100 bases:

>100_bases
ACCCGACGATGGGCAGCGCCCGCGCGGTCTGGGTGGTGATGATCATGGTGTTTGCGGTCACCGGGCTGTGGATCGCCGAA
TTCGTATTGAGGGTGCCGGT

Downstream 100 bases:

>100_bases
GCAACCCTCACGCTTCCGGCGTCGCCGCCGCTTCGAAAGTCGATCGATGAAAATTGCGTTCGCCATCGTCACGTTGTTTT
CCGCCGGTGGTCTGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSNELIAMLAHLAHQAAFGAVAAAGFGVLFNFGWRSLAWCAVAGALALGIRTFSQTSGASLEAATFLAAIGTSCIAILAR
RWLGVACNAIALAGCIPMVPGAFFGQAMIGYISVAADTSGQSVEQLVASAQAFIRVVSIVGAIGAGLAIPAYLLRSRQF

Sequences:

>Translated_159_residues
MSNELIAMLAHLAHQAAFGAVAAAGFGVLFNFGWRSLAWCAVAGALALGIRTFSQTSGASLEAATFLAAIGTSCIAILAR
RWLGVACNAIALAGCIPMVPGAFFGQAMIGYISVAADTSGQSVEQLVASAQAFIRVVSIVGAIGAGLAIPAYLLRSRQF
>Mature_158_residues
SNELIAMLAHLAHQAAFGAVAAAGFGVLFNFGWRSLAWCAVAGALALGIRTFSQTSGASLEAATFLAAIGTSCIAILARR
WLGVACNAIALAGCIPMVPGAFFGQAMIGYISVAADTSGQSVEQLVASAQAFIRVVSIVGAIGAGLAIPAYLLRSRQF

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0442 family [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=155, Percent_Identity=34.8387096774194, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619
- InterPro:   IPR020914 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 16164; Mature: 16033

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELIAMLAHLAHQAAFGAVAAAGFGVLFNFGWRSLAWCAVAGALALGIRTFSQTSGAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LEAATFLAAIGTSCIAILARRWLGVACNAIALAGCIPMVPGAFFGQAMIGYISVAADTSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
QSVEQLVASAQAFIRVVSIVGAIGAGLAIPAYLLRSRQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNELIAMLAHLAHQAAFGAVAAAGFGVLFNFGWRSLAWCAVAGALALGIRTFSQTSGAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LEAATFLAAIGTSCIAILARRWLGVACNAIALAGCIPMVPGAFFGQAMIGYISVAADTSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
QSVEQLVASAQAFIRVVSIVGAIGAGLAIPAYLLRSRQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA