| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749975
Identifier: 86749975
GI number: 86749975
Start: 3257608
End: 3259284
Strand: Reverse
Name: 86749975
Synonym: RPB_2858
Alternate gene names: NA
Gene position: 3259284-3257608 (Counterclockwise)
Preceding gene: 86749981
Following gene: 86749972
Centisome position: 61.13
GC content: 65.18
Gene sequence:
>1677_bases ATGCCCTTGGCAGATTGCCTGCGAGCGGGTAATCGACGGTCATTCTGGAGGACGGAACCCATTTCTTTTCGCACGCCGCT GGCGCTTCTCCCGATTTCTCTCGGCATCATCTTCGGCGTCTGGTGGTGGATCGCCACGCCGGTCGATCTGGCGCGCGCGC CGATCGATCCGAACGACAAGCTCGAATGCGTTTCTTATGCGCCGTTCCGTGGCGCGCAGACGCCGCTCGATCCGACGACG CAGATCGGCGCCGACCAGATCGAGCAGGATCTGACGCAGCTCGCCAAGATATCCAAATGCGTGCGCACTTACTCGGTCGA CAACGGCCTCGAAAAACTGCCGGCGATCGCCGGCAAGGTCGGGCTGAAGGTGCTGCAGGGCATCTGGCTCGGCAACGAGC GCGCCAAGAACCTGGCGCAGATCGCCGTCGCCGTCGGTCTCGCCAAGGACTATCCGGATGTCATCAGTTCACTGGTAGTC GGCAACGAAGTGCTGTTGCGCGGCGAGATGACCGCGGGCGATCTCGCCGCGACGATTCGTCTGGTGAAGTCGCAGGTGAA GACGCCCGTGACCTACGCGGATGTCTGGGAATACTGGCTGCGTCATCGCGAGATCTACGAGGCGGTCGATTTCGTCACGA TCCACATCCTGCCGTATTGGGAAGACCTGCCGATTCGCGCGCGCAATGCCGCCGCGCACGTCGATCAGATTCGCAAGCGC GTCGCGGTCGCATTCCCGGCCAAGGAAATCCTGATCGGCGAGACCGGCTGGCCGAGCGCGGGACGGATGCGCGAGGGCGC GCTGCCGTCGCGCACCAACCAGGCGCGGGTCGTGTCGGAAATTCTGGGGCTCGCCAAGGCGGAGAACTTTCGCGTCAACC TGATCGAAGCCTACGATCAGCCGTGGAAGCGCGATCTCGAGGGCACGGTCGGTGGTTACTGGGGCCTGATCGACGCCGAC AATCGCGCGCTGAAGTACCCGGCAGGTGTGCCGATCAGCAATTTCCCGCAGTGGAAATTGTCGATGGCCGCCGGCATGGC GCTCAGCCTGGTGGTGTTTGCGACCGCGATGCTGACGCTGCGGCGCAGGCCCTGGGCGCCGCGGCTGGCCGCCTGGCTCG CCGTGGGGGTGTCGGCGACAGCGGGCGGCGTGCTGCTCGGCATCGCCGTCGACAAGATGCTGGTGGAGAGCTACGGCTGG GGCCGCTGGCTGCAATGGGGATTGCTGCTGGCGAGCGGCGTGCTGACGCCGATTCTGGCGGCGCATGCGCTGATGGTGGG CCGGGCGGTCCCGACCTTCCTCGAACTGTTCGGCCCGCTGGAGCAGCGCAACCGATCGTTCCTGACCTATGCGCTCGGTT TGTCGGTCGTGGTGACCACGCTGATCGGCGCCCAGACCGCGCTCGGCTTCACCTTCGATCCGCGCTATCGCGATTTCCCG TTCGCGTCGTTGACGATGGCGGTGCTGCCGCTGTTCCTGTTGATGCTGCTGAACCGTCCGCAGCAGGGCGCGCGGCCGAT CGCCGAGGCGGTGTTCGCCGGGGTGTTCGCGGTCTGCGCGCTTTACATCGTCTTCAACGAAGGGCCGAAGAACTGGCAGT CGCTGTGGACCTGCGCGGTGTACGCGATGCTGGCGCTTACGCTGTGGCGGGCGCGGGTCGTGCAAATCCCAAAATAA
Upstream 100 bases:
>100_bases CGATTTGTCCAGCAATGGCAATCGATCGGCGACGACATGGCGGCGAATTCACGTTGCTTAACGCGCGTTCATTTTGGAGC GCGTCGGGTTGCGTCAGCTT
Downstream 100 bases:
>100_bases GCAGCCCGATCGCGATCCCCGACAGGCCGATATTGTAGAGCACGATGCCGAAGCCGGCGGCGACCAGACCCGCGGTCAGC AGCACGATCGACGGCCGGAT
Product: putative beta (1-6) glucans synthase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Exo-Beta-1 3-Glucanase-Like Protein; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MPLADCLRAGNRRSFWRTEPISFRTPLALLPISLGIIFGVWWWIATPVDLARAPIDPNDKLECVSYAPFRGAQTPLDPTT QIGADQIEQDLTQLAKISKCVRTYSVDNGLEKLPAIAGKVGLKVLQGIWLGNERAKNLAQIAVAVGLAKDYPDVISSLVV GNEVLLRGEMTAGDLAATIRLVKSQVKTPVTYADVWEYWLRHREIYEAVDFVTIHILPYWEDLPIRARNAAAHVDQIRKR VAVAFPAKEILIGETGWPSAGRMREGALPSRTNQARVVSEILGLAKAENFRVNLIEAYDQPWKRDLEGTVGGYWGLIDAD NRALKYPAGVPISNFPQWKLSMAAGMALSLVVFATAMLTLRRRPWAPRLAAWLAVGVSATAGGVLLGIAVDKMLVESYGW GRWLQWGLLLASGVLTPILAAHALMVGRAVPTFLELFGPLEQRNRSFLTYALGLSVVVTTLIGAQTALGFTFDPRYRDFP FASLTMAVLPLFLLMLLNRPQQGARPIAEAVFAGVFAVCALYIVFNEGPKNWQSLWTCAVYAMLALTLWRARVVQIPK
Sequences:
>Translated_558_residues MPLADCLRAGNRRSFWRTEPISFRTPLALLPISLGIIFGVWWWIATPVDLARAPIDPNDKLECVSYAPFRGAQTPLDPTT QIGADQIEQDLTQLAKISKCVRTYSVDNGLEKLPAIAGKVGLKVLQGIWLGNERAKNLAQIAVAVGLAKDYPDVISSLVV GNEVLLRGEMTAGDLAATIRLVKSQVKTPVTYADVWEYWLRHREIYEAVDFVTIHILPYWEDLPIRARNAAAHVDQIRKR VAVAFPAKEILIGETGWPSAGRMREGALPSRTNQARVVSEILGLAKAENFRVNLIEAYDQPWKRDLEGTVGGYWGLIDAD NRALKYPAGVPISNFPQWKLSMAAGMALSLVVFATAMLTLRRRPWAPRLAAWLAVGVSATAGGVLLGIAVDKMLVESYGW GRWLQWGLLLASGVLTPILAAHALMVGRAVPTFLELFGPLEQRNRSFLTYALGLSVVVTTLIGAQTALGFTFDPRYRDFP FASLTMAVLPLFLLMLLNRPQQGARPIAEAVFAGVFAVCALYIVFNEGPKNWQSLWTCAVYAMLALTLWRARVVQIPK >Mature_557_residues PLADCLRAGNRRSFWRTEPISFRTPLALLPISLGIIFGVWWWIATPVDLARAPIDPNDKLECVSYAPFRGAQTPLDPTTQ IGADQIEQDLTQLAKISKCVRTYSVDNGLEKLPAIAGKVGLKVLQGIWLGNERAKNLAQIAVAVGLAKDYPDVISSLVVG NEVLLRGEMTAGDLAATIRLVKSQVKTPVTYADVWEYWLRHREIYEAVDFVTIHILPYWEDLPIRARNAAAHVDQIRKRV AVAFPAKEILIGETGWPSAGRMREGALPSRTNQARVVSEILGLAKAENFRVNLIEAYDQPWKRDLEGTVGGYWGLIDADN RALKYPAGVPISNFPQWKLSMAAGMALSLVVFATAMLTLRRRPWAPRLAAWLAVGVSATAGGVLLGIAVDKMLVESYGWG RWLQWGLLLASGVLTPILAAHALMVGRAVPTFLELFGPLEQRNRSFLTYALGLSVVVTTLIGAQTALGFTFDPRYRDFPF ASLTMAVLPLFLLMLLNRPQQGARPIAEAVFAGVFAVCALYIVFNEGPKNWQSLWTCAVYAMLALTLWRARVVQIPK
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321721, Length=281, Percent_Identity=26.3345195729537, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6321410, Length=275, Percent_Identity=25.4545454545455, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321718, Length=240, Percent_Identity=25.8333333333333, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323964, Length=263, Percent_Identity=24.7148288973384, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61539; Mature: 61407
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00587 GLYCOSYL_HYDROL_F17
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLADCLRAGNRRSFWRTEPISFRTPLALLPISLGIIFGVWWWIATPVDLARAPIDPNDK CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC LECVSYAPFRGAQTPLDPTTQIGADQIEQDLTQLAKISKCVRTYSVDNGLEKLPAIAGKV EEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GLKVLQGIWLGNERAKNLAQIAVAVGLAKDYPDVISSLVVGNEVLLRGEMTAGDLAATIR HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHH LVKSQVKTPVTYADVWEYWLRHREIYEAVDFVTIHILPYWEDLPIRARNAAAHVDQIRKR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHH VAVAFPAKEILIGETGWPSAGRMREGALPSRTNQARVVSEILGLAKAENFRVNLIEAYDQ HHHHCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCC PWKRDLEGTVGGYWGLIDADNRALKYPAGVPISNFPQWKLSMAAGMALSLVVFATAMLTL CHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRRPWAPRLAAWLAVGVSATAGGVLLGIAVDKMLVESYGWGRWLQWGLLLASGVLTPILA HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AHALMVGRAVPTFLELFGPLEQRNRSFLTYALGLSVVVTTLIGAQTALGFTFDPRYRDFP HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC FASLTMAVLPLFLLMLLNRPQQGARPIAEAVFAGVFAVCALYIVFNEGPKNWQSLWTCAV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YAMLALTLWRARVVQIPK HHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLADCLRAGNRRSFWRTEPISFRTPLALLPISLGIIFGVWWWIATPVDLARAPIDPNDK CHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC LECVSYAPFRGAQTPLDPTTQIGADQIEQDLTQLAKISKCVRTYSVDNGLEKLPAIAGKV EEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GLKVLQGIWLGNERAKNLAQIAVAVGLAKDYPDVISSLVVGNEVLLRGEMTAGDLAATIR HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHH LVKSQVKTPVTYADVWEYWLRHREIYEAVDFVTIHILPYWEDLPIRARNAAAHVDQIRKR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHH VAVAFPAKEILIGETGWPSAGRMREGALPSRTNQARVVSEILGLAKAENFRVNLIEAYDQ HHHHCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCC PWKRDLEGTVGGYWGLIDADNRALKYPAGVPISNFPQWKLSMAAGMALSLVVFATAMLTL CHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRRPWAPRLAAWLAVGVSATAGGVLLGIAVDKMLVESYGWGRWLQWGLLLASGVLTPILA HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AHALMVGRAVPTFLELFGPLEQRNRSFLTYALGLSVVVTTLIGAQTALGFTFDPRYRDFP HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC FASLTMAVLPLFLLMLLNRPQQGARPIAEAVFAGVFAVCALYIVFNEGPKNWQSLWTCAV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YAMLALTLWRARVVQIPK HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA