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The map label for this gene is 86749947

Identifier: 86749947

GI number: 86749947

Start: 3224509

End: 3224916

Strand: Reverse

Name: 86749947

Synonym: RPB_2830

Alternate gene names: NA

Gene position: 3224916-3224509 (Counterclockwise)

Preceding gene: 86749948

Following gene: 86749945

Centisome position: 60.49

GC content: 66.91

Gene sequence:

>408_bases
ATGGATATTTTCGTAGCCGGTTCGCGTCCGACCCAGCGGGCGCCGAAAGACTATTTTACCGGGACGGTCTGGCAGGACCC
GATCGTCTCCGCGCCGGCCCCGGCGCGGCTGGCGGCGACCCGCGTCGCGTTCGAACCGGGGGCGCGAACGGCCTGGCACA
CCCATCCGCTCGGCCAGACGCTGTACGTCGTGACGGGGCTCGGCCGGATCCAGACCGAGGGCGGGCCGGTCCGCGAGATC
AAGGCCGGCGACGTGGTCTGGATACCGCCCGGTGAGAAGCACTGGCATGGCGCGTCGCCGACCAACGGCATGACCCATAT
CGCCATGCAGGAAGCGCTCGATGGCAGCTTCGCAACCTGGATGGAACCCGTCTCCGATGCCGATTATGCCGTGAATCCAT
CTGTTTGA

Upstream 100 bases:

>100_bases
CCTGCCGGGGCTGTATCCGATGAACGCCGAAACCAAGGCCCGCTACGCCGCGTTCAAGGAGAAGGCCGGCAAGGCGTAAC
CAAACCGCAGAGGGGCAGAC

Downstream 100 bases:

>100_bases
CGGGACCCGTTGAAACGCTGCGCAAGCGACGCGGAGGCGACGCGCAGCGCCTTCGGCCTCAGTTGAGGATCACAAGCCAA
GCATCTGTCATTCCACGCGA

Product: cupin region

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Family Protein; Cupin Region; Double-Stranded Beta-Helix-Like Protein; Cupin Domain Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Carboxymuconolactone Decarboxylase Family Protein; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein; Secreted Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDIFVAGSRPTQRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQTLYVVTGLGRIQTEGGPVREI
KAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATWMEPVSDADYAVNPSV

Sequences:

>Translated_135_residues
MDIFVAGSRPTQRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQTLYVVTGLGRIQTEGGPVREI
KAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATWMEPVSDADYAVNPSV
>Mature_135_residues
MDIFVAGSRPTQRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQTLYVVTGLGRIQTEGGPVREI
KAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATWMEPVSDADYAVNPSV

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14548; Mature: 14548

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFVAGSRPTQRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQT
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCE
LYVVTGLGRIQTEGGPVREIKAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATW
EEEEECCCEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHCCCCHHHH
MEPVSDADYAVNPSV
HCCCCCCCEEECCCC
>Mature Secondary Structure
MDIFVAGSRPTQRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQT
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCE
LYVVTGLGRIQTEGGPVREIKAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATW
EEEEECCCEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHCCCCHHHH
MEPVSDADYAVNPSV
HCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA