| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749899
Identifier: 86749899
GI number: 86749899
Start: 3171344
End: 3172855
Strand: Reverse
Name: 86749899
Synonym: RPB_2782
Alternate gene names: NA
Gene position: 3172855-3171344 (Counterclockwise)
Preceding gene: 86749900
Following gene: 86749895
Centisome position: 59.51
GC content: 69.31
Gene sequence:
>1512_bases ATGCGCCGTTTGCAGATTGCAGCCGCGGGCGCTGTGGTGGCGATGGCCGCTCTGACGACCCTGGCGGAGGCTGCATCGAC TAAGCGAACGCGGCCGGCCCCGACCGAGACGGTGGCGCCCCGGCCGGCCGGCGAACCGATTATGGCGATCATCTCGATCA AGTCGCAGCAGGTCACGCTGTACGACGCCGACGGCTGGATCCTGCGCGCGCCGGTCTCCACCGGCACTACGGGGCGGGAG ACGCCGGCGGGCGTGTTTGCGATCCTCGAGAAAAATCGCGACCATCGTTCGAGCATGTACGACGATGCCTGGATGCCGCA TATGCAGCGCATCACCTGGAACGGCATCGCGCTGCATGGCGGCCCGCTGCCGGGCTACGCCGCCTCCCATGGCTGCGTGC GGATGCCCTATGGCTTCGCGGAGACGCTGTTCGACAGGACGCGGATCGGGATGCGGGTCATCGTCTCGCCGCAGGACACG GCCCCGGTGGATATTTCGCATCCGGCGCTGCTGGTGCCGACCCCGGACGCCAGTTCAGCGGCGCCGGTGCGCGCGCAGAC GCTGGCGCGTGAGGCCGATGAAGCCGCCGCCGCCGCAGTCGACGCCAAGAAGGCCGCCAAGGCTGCGGCCCGCGAGGTGG CCCCGCTGAAGGCTACGCTTCGGGCACTCGAACGGGCCAAGGCACGGGCCGAGGCGGAGCTGAAGCGTGCCGACAAAGTG CTCGGTTCCGCCAAAACCGACGACGCCCGGGCCAAGGCCGAGACGCAGCAGCAGAAGGCCGCGCAGCGGGCCGGGGAGGC TGCGGCCCAACTCGCCAATGCGATCGCGGACGCTGAAGCCAAACGGGCGCTGGCCGACAGTACCAAGGAAGCCGCCAGGG CGGCCGAGACGAGGAAGGCAGAGACGGCGCACGTCGCTCTGGACGCCAAGCTCGCGCAGGAGCCGGTCTCGATCTACATC AGCCGCGAAACGCAGAAGCTCTACGTCCGCCGCAACACCCACAAGCCCGCGCCGGACGGCGGCGGCGAGGTGTTCGACGC CAGCATCGAGGTCCCGGTCACGATCCGCGATCCGCATCGGCCGATCGGCACGCATATCTTCACCGCCATGGCGAAGACGG ACATCGGGCTGCGCTGGAGCGCGGTGACGATCGACGAGGGTGACGGCGCCAGGGCGGCGCTGGATCGCATTACGATCCCG AAGGAGGTGCTCGACCGCATCGGCCCGACGGCGCTGCCGCGCAGCTCGATCGTGATTTCGGACGAGCCGCTGAGCGTCGA GACCAACTACCGCACCGAATTCGTCGCGGTCCTGAAAGACCATCCGCAGGGCGGCTTCATCACCCGCAAGCCGACACCCG CTGTCATGGTGGCCGATCGCGACGACGGTTGGGACGACGGCGGCTTCGGCTTTTTCTTTCAGCGCGGGCCGGAGCCGCAG CCGAGAAACTACCGGCAACAGCGCGGCGGCCGCGTCTACCCGCCGCAACCGACGCCGGGCTGGGGCTGGTAG
Upstream 100 bases:
>100_bases TCATGCCTGGACCATTTTGCCGGCAATAATGCTGCGGACATCGATGCGAGCGAGGATCGGCGTGGTGAATGGACTGAAGG CCGGACGACGGGGCGAGACG
Downstream 100 bases:
>100_bases CAAGCGCCAAGCGCCGCGCGATGCGGGGACTGGTGAGTTCGCCGCCGTAGAGCCCGGCCCGGGGGGCGCGCCGTCAGTGT GACTCGCCGGCGTGTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; Protein ErfK Family
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MRRLQIAAAGAVVAMAALTTLAEAASTKRTRPAPTETVAPRPAGEPIMAIISIKSQQVTLYDADGWILRAPVSTGTTGRE TPAGVFAILEKNRDHRSSMYDDAWMPHMQRITWNGIALHGGPLPGYAASHGCVRMPYGFAETLFDRTRIGMRVIVSPQDT APVDISHPALLVPTPDASSAAPVRAQTLAREADEAAAAAVDAKKAAKAAAREVAPLKATLRALERAKARAEAELKRADKV LGSAKTDDARAKAETQQQKAAQRAGEAAAQLANAIADAEAKRALADSTKEAARAAETRKAETAHVALDAKLAQEPVSIYI SRETQKLYVRRNTHKPAPDGGGEVFDASIEVPVTIRDPHRPIGTHIFTAMAKTDIGLRWSAVTIDEGDGARAALDRITIP KEVLDRIGPTALPRSSIVISDEPLSVETNYRTEFVAVLKDHPQGGFITRKPTPAVMVADRDDGWDDGGFGFFFQRGPEPQ PRNYRQQRGGRVYPPQPTPGWGW
Sequences:
>Translated_503_residues MRRLQIAAAGAVVAMAALTTLAEAASTKRTRPAPTETVAPRPAGEPIMAIISIKSQQVTLYDADGWILRAPVSTGTTGRE TPAGVFAILEKNRDHRSSMYDDAWMPHMQRITWNGIALHGGPLPGYAASHGCVRMPYGFAETLFDRTRIGMRVIVSPQDT APVDISHPALLVPTPDASSAAPVRAQTLAREADEAAAAAVDAKKAAKAAAREVAPLKATLRALERAKARAEAELKRADKV LGSAKTDDARAKAETQQQKAAQRAGEAAAQLANAIADAEAKRALADSTKEAARAAETRKAETAHVALDAKLAQEPVSIYI SRETQKLYVRRNTHKPAPDGGGEVFDASIEVPVTIRDPHRPIGTHIFTAMAKTDIGLRWSAVTIDEGDGARAALDRITIP KEVLDRIGPTALPRSSIVISDEPLSVETNYRTEFVAVLKDHPQGGFITRKPTPAVMVADRDDGWDDGGFGFFFQRGPEPQ PRNYRQQRGGRVYPPQPTPGWGW >Mature_503_residues MRRLQIAAAGAVVAMAALTTLAEAASTKRTRPAPTETVAPRPAGEPIMAIISIKSQQVTLYDADGWILRAPVSTGTTGRE TPAGVFAILEKNRDHRSSMYDDAWMPHMQRITWNGIALHGGPLPGYAASHGCVRMPYGFAETLFDRTRIGMRVIVSPQDT APVDISHPALLVPTPDASSAAPVRAQTLAREADEAAAAAVDAKKAAKAAAREVAPLKATLRALERAKARAEAELKRADKV LGSAKTDDARAKAETQQQKAAQRAGEAAAQLANAIADAEAKRALADSTKEAARAAETRKAETAHVALDAKLAQEPVSIYI SRETQKLYVRRNTHKPAPDGGGEVFDASIEVPVTIRDPHRPIGTHIFTAMAKTDIGLRWSAVTIDEGDGARAALDRITIP KEVLDRIGPTALPRSSIVISDEPLSVETNYRTEFVAVLKDHPQGGFITRKPTPAVMVADRDDGWDDGGFGFFFQRGPEPQ PRNYRQQRGGRVYPPQPTPGWGW
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54086; Mature: 54086
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLQIAAAGAVVAMAALTTLAEAASTKRTRPAPTETVAPRPAGEPIMAIISIKSQQVTL CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE YDADGWILRAPVSTGTTGRETPAGVFAILEKNRDHRSSMYDDAWMPHMQRITWNGIALHG EECCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHCCHHHEEEECCEEEEC GPLPGYAASHGCVRMPYGFAETLFDRTRIGMRVIVSPQDTAPVDISHPALLVPTPDASSA CCCCCCCCCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCEECCCCEEEEECCCCCCC APVRAQTLAREADEAAAAAVDAKKAAKAAAREVAPLKATLRALERAKARAEAELKRADKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSAKTDDARAKAETQQQKAAQRAGEAAAQLANAIADAEAKRALADSTKEAARAAETRKA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETAHVALDAKLAQEPVSIYISRETQKLYVRRNTHKPAPDGGGEVFDASIEVPVTIRDPHR CCEEEEEEHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEECEEEEEEEECCCCC PIGTHIFTAMAKTDIGLRWSAVTIDEGDGARAALDRITIPKEVLDRIGPTALPRSSIVIS CHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEC DEPLSVETNYRTEFVAVLKDHPQGGFITRKPTPAVMVADRDDGWDDGGFGFFFQRGPEPQ CCCCEEECCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCC PRNYRQQRGGRVYPPQPTPGWGW CCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRLQIAAAGAVVAMAALTTLAEAASTKRTRPAPTETVAPRPAGEPIMAIISIKSQQVTL CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE YDADGWILRAPVSTGTTGRETPAGVFAILEKNRDHRSSMYDDAWMPHMQRITWNGIALHG EECCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHCCHHHEEEECCEEEEC GPLPGYAASHGCVRMPYGFAETLFDRTRIGMRVIVSPQDTAPVDISHPALLVPTPDASSA CCCCCCCCCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCEECCCCEEEEECCCCCCC APVRAQTLAREADEAAAAAVDAKKAAKAAAREVAPLKATLRALERAKARAEAELKRADKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSAKTDDARAKAETQQQKAAQRAGEAAAQLANAIADAEAKRALADSTKEAARAAETRKA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETAHVALDAKLAQEPVSIYISRETQKLYVRRNTHKPAPDGGGEVFDASIEVPVTIRDPHR CCEEEEEEHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEECEEEEEEEECCCCC PIGTHIFTAMAKTDIGLRWSAVTIDEGDGARAALDRITIPKEVLDRIGPTALPRSSIVIS CHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEC DEPLSVETNYRTEFVAVLKDHPQGGFITRKPTPAVMVADRDDGWDDGGFGFFFQRGPEPQ CCCCEEECCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCC PRNYRQQRGGRVYPPQPTPGWGW CCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA