| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749894
Identifier: 86749894
GI number: 86749894
Start: 3164269
End: 3165405
Strand: Reverse
Name: 86749894
Synonym: RPB_2777
Alternate gene names: NA
Gene position: 3165405-3164269 (Counterclockwise)
Preceding gene: 86749895
Following gene: 86749893
Centisome position: 59.37
GC content: 65.61
Gene sequence:
>1137_bases GTGACCGAGGCCACCACCGGACTGCAACTGCGCTCGCTGATCAAAGCGAGCGGCGATCTCGAAGTCTCGCTGGTGCCGGT CGACATCCCGGAGCCCGGCGACGATGAGGTCGTGGTCCGGATCGCGGCGACGCCGATCAATCCCTCCGACCTCGGCCTGC TGTTCGGCGCCGCCGACATGTCCACTGCCGAGGCGTCCGGAACGCCGGATGCGCCTGTAATCACCGCCAAGGTGCCGGAC GCGGCGATGAAGGCAATGGCCGGACGGCTCGACGAGTCGATGCCGGTCGGCAATGAAGGCGCCGGGACGGTGATCAAGGC CGGCAGATCGGATTCGGCGCAGGCACTGCTCGGCAAGACCGTGGCGATGATCGGCGGCGCGATGTACGCGCAGTATCGCG TCATCAAGGCGGCCGACTGCCTGCAACTGGCCGAAGGGACCACTGCCGCCGAAGGCGCGTCCTGTTTCGTCAATCCGCTG ACCGCGCTCGGCATGGTCGAGACGATGAAGCGGGAAGGTCACAAGGCTCTGGTGCATACCGCCGCGGCGTCGAATCTCGG CCAGATGCTCAACCGCATCTGCCTCCAGGACGGAATCGATCTGGTCAATATCGTGCGCAGCGAGGCGCAGGCCAAGCTGC TACGCGACATCGGCGCCAAATACGTGGTCGACTCGTCGTCGTCGACTTTCATGGCCGAACTCACCGACGCACTGGCGGAG ACCGGCGCGACCGTCGCGTTCGACGCGATCGGCGGAGGCCGACTGGCCGGGCAGATCCTCACCTGCATGGAAGCGGCGAT CGCCAAGACGTCGAGCGGGCCCTACAGCCGCTACGGCTCCAATGTGCTGAAGCAGGTTTATATCTACGGCGGGCTGGATA CGCGGCCGACCGAGATCGTCCGCAATTTCGGGATGATCTGGGCGGTCGGAGGCTGGCTGCTGTTCCCGTTCCTGCAGAAG ATCGGCGCGGCAGATGCGGCGCGCCTGCGTGCCCGCGTCGCCGCCGAGATCAAGACCACCTTCGCCAGCCATTACACCCG CGTGGTGTCGCTGAAGGAGGCGCTGACGCTCGACGCCATCGCGGTCTACAACAAGCGCGCGACCGGCGAGAAATTCCTGA TCGATCCGACCAAATAA
Upstream 100 bases:
>100_bases CGCTCCTCGCAATGACGGATAGGTTATCAACGCGGTCTTGAACCCCGCGCGCGACTGCTCCAAGGTGCCGCCGCGCTGAC AAAAAGCAGGGAGAAGACGC
Downstream 100 bases:
>100_bases TCGCCGCGATCGGCTGCAAATCATGCTGGATGGGGCTGAGATTGAGAGTTAGTCTCAGCCGGCGCGGGCAAAGCAGGACA TGATCATGGACCAGATGACT
Product: NADH oxidoreductase
Products: NA
Alternate protein names: Alcohol Dehydrogenase; Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase GroES-Like Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; Alcohol Dehydrogenase GroES Domain-Containing Protein; NADH Oxidoreductas; Zn-Dependent Alcohol Dehydrogenase; Trans-2-Enoyl-CoA Reductase; Alcohol Dehydrogenase-Like Protein; Zn-Dependent Oxidoreductase; NADH Oxidoreductase-Like; Quinone Oxidoreductase
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTEATTGLQLRSLIKASGDLEVSLVPVDIPEPGDDEVVVRIAATPINPSDLGLLFGAADMSTAEASGTPDAPVITAKVPD AAMKAMAGRLDESMPVGNEGAGTVIKAGRSDSAQALLGKTVAMIGGAMYAQYRVIKAADCLQLAEGTTAAEGASCFVNPL TALGMVETMKREGHKALVHTAAASNLGQMLNRICLQDGIDLVNIVRSEAQAKLLRDIGAKYVVDSSSSTFMAELTDALAE TGATVAFDAIGGGRLAGQILTCMEAAIAKTSSGPYSRYGSNVLKQVYIYGGLDTRPTEIVRNFGMIWAVGGWLLFPFLQK IGAADAARLRARVAAEIKTTFASHYTRVVSLKEALTLDAIAVYNKRATGEKFLIDPTK
Sequences:
>Translated_378_residues MTEATTGLQLRSLIKASGDLEVSLVPVDIPEPGDDEVVVRIAATPINPSDLGLLFGAADMSTAEASGTPDAPVITAKVPD AAMKAMAGRLDESMPVGNEGAGTVIKAGRSDSAQALLGKTVAMIGGAMYAQYRVIKAADCLQLAEGTTAAEGASCFVNPL TALGMVETMKREGHKALVHTAAASNLGQMLNRICLQDGIDLVNIVRSEAQAKLLRDIGAKYVVDSSSSTFMAELTDALAE TGATVAFDAIGGGRLAGQILTCMEAAIAKTSSGPYSRYGSNVLKQVYIYGGLDTRPTEIVRNFGMIWAVGGWLLFPFLQK IGAADAARLRARVAAEIKTTFASHYTRVVSLKEALTLDAIAVYNKRATGEKFLIDPTK >Mature_377_residues TEATTGLQLRSLIKASGDLEVSLVPVDIPEPGDDEVVVRIAATPINPSDLGLLFGAADMSTAEASGTPDAPVITAKVPDA AMKAMAGRLDESMPVGNEGAGTVIKAGRSDSAQALLGKTVAMIGGAMYAQYRVIKAADCLQLAEGTTAAEGASCFVNPLT ALGMVETMKREGHKALVHTAAASNLGQMLNRICLQDGIDLVNIVRSEAQAKLLRDIGAKYVVDSSSSTFMAELTDALAET GATVAFDAIGGGRLAGQILTCMEAAIAKTSSGPYSRYGSNVLKQVYIYGGLDTRPTEIVRNFGMIWAVGGWLLFPFLQKI GAADAARLRARVAAEIKTTFASHYTRVVSLKEALTLDAIAVYNKRATGEKFLIDPTK
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39575; Mature: 39444
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEATTGLQLRSLIKASGDLEVSLVPVDIPEPGDDEVVVRIAATPINPSDLGLLFGAADM CCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCC STAEASGTPDAPVITAKVPDAAMKAMAGRLDESMPVGNEGAGTVIKAGRSDSAQALLGKT CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHH VAMIGGAMYAQYRVIKAADCLQLAEGTTAAEGASCFVNPLTALGMVETMKREGHKALVHT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH AAASNLGQMLNRICLQDGIDLVNIVRSEAQAKLLRDIGAKYVVDSSSSTFMAELTDALAE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH TGATVAFDAIGGGRLAGQILTCMEAAIAKTSSGPYSRYGSNVLKQVYIYGGLDTRPTEIV CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCHHHHH RNFGMIWAVGGWLLFPFLQKIGAADAARLRARVAAEIKTTFASHYTRVVSLKEALTLDAI HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVYNKRATGEKFLIDPTK HHHCCCCCCCEEEECCCC >Mature Secondary Structure TEATTGLQLRSLIKASGDLEVSLVPVDIPEPGDDEVVVRIAATPINPSDLGLLFGAADM CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCC STAEASGTPDAPVITAKVPDAAMKAMAGRLDESMPVGNEGAGTVIKAGRSDSAQALLGKT CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHH VAMIGGAMYAQYRVIKAADCLQLAEGTTAAEGASCFVNPLTALGMVETMKREGHKALVHT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH AAASNLGQMLNRICLQDGIDLVNIVRSEAQAKLLRDIGAKYVVDSSSSTFMAELTDALAE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH TGATVAFDAIGGGRLAGQILTCMEAAIAKTSSGPYSRYGSNVLKQVYIYGGLDTRPTEIV CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCHHHHH RNFGMIWAVGGWLLFPFLQKIGAADAARLRARVAAEIKTTFASHYTRVVSLKEALTLDAI HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVYNKRATGEKFLIDPTK HHHCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA