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The map label for this gene is scpB [H]

Identifier: 86749863

GI number: 86749863

Start: 3129598

End: 3130674

Strand: Reverse

Name: scpB [H]

Synonym: RPB_2746

Alternate gene names: 86749863

Gene position: 3130674-3129598 (Counterclockwise)

Preceding gene: 86749864

Following gene: 86749862

Centisome position: 58.72

GC content: 68.62

Gene sequence:

>1077_bases
ATGGCAAGTCTGGCGGAGAAGCGCATCGTGGAGTTCGAACCCAAAGTCGAACACGCCGAGGTCAGCGCCGAACAGCAGCC
GCAAACCCGGCCCGAGGAACTGCGCCTTCTCGAAGCCCTGCTGTTCGCCTCGACCGAACCGCTCGAACAGTCGGCGCTGG
CCAAGCGAATGCCGGACGGCGTCGACGTCAAGGCGGCGCTGGCGCAACTCCAGGCCGACTACGCGCATCGCGGCGTCAAC
CTCGTGCGCATCGCCAGCAAATGGACCTTCCGCACCGCCGGCGATCTCGCCTGGCTGATGACGCGCGAGACCACCGAGAC
GCGCAAGCTGTCGCGCGCCGCGATCGAGATGCTGGCGATCATCGCCTATCACCAGCCGATCACCCGCGCCGAGATCGAAG
ACATCCGCGGCGTGGTGACCTCGAAGGGCACGCTCGACGTGCTGCTGGAGACCGGCTGGATCCGCCCGCGCGGCCGTCGC
AAGACGCCGGGCCGGCCGCTCACCTTCGGCACCACGGAGAGCTTCCTGTCGCAGTTCAGCCTCGAAGCGCTGAGCGATCT
GCCCGGCCTCGAAGAGCTGAAGGGCTCCGGCCTGCTCGATACTCGGCTGCCGACCGGCTTCAACGTGCCGACGCCGTCGG
ACGATCCGACGCTGCGCGAGGACGAGGACCCGCTGGAGTCCGGCGATCTCGAACTGGCGCTGGCGCCGGTCGCCGATCCG
GAGACCGACGAAGTCGGTGCTGCGGCTCAGGCGGCCGAGGCGGAGACCGCTTGGACCGCGACTGTCGAGGCCGAAGTCGG
CGAATCCGCGACCGGCCTTGCCGAGACGCCCGAGGATCAGCCTGCCGAGGCCGAGGTCGGCTTCGCCGAAGCCTATGAGG
ACGGATCGGACGCCACGGATACCGGCGCCACGGACGAGGCGACGCTGGAAACGCTCGAACACGATGAGTTCGACGACGAA
ACGGGCGCGTCGGACGCGGCGGAGACCGAAACCGCGGAGCTTGATACCGCCGAGGCCGACGAAGCCGAGGCGCACGACGA
CAACGGCGACGGCAAAGGCGGTCACGAGCCGAACTGA

Upstream 100 bases:

>100_bases
TCGCGCCTTTGTATTTTCGTAAGCGTCCGCCGTCTCCAGCGATGGAAGCGGCGGCCGTGCCGGACGTTCCGGCAGGGTAG
TGGAAGAAGGAGAGCGAGCC

Downstream 100 bases:

>100_bases
CTCGCGTTAAGCGCGACGACAGGAACCTCCAGCCGCGACGATCACGACGCCGTTGTGGCGGCTTAAATCCTTGTTTTTGG
CGACCTTTGCCCCTAGTTTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MASLAEKRIVEFEPKVEHAEVSAEQQPQTRPEELRLLEALLFASTEPLEQSALAKRMPDGVDVKAALAQLQADYAHRGVN
LVRIASKWTFRTAGDLAWLMTRETTETRKLSRAAIEMLAIIAYHQPITRAEIEDIRGVVTSKGTLDVLLETGWIRPRGRR
KTPGRPLTFGTTESFLSQFSLEALSDLPGLEELKGSGLLDTRLPTGFNVPTPSDDPTLREDEDPLESGDLELALAPVADP
ETDEVGAAAQAAEAETAWTATVEAEVGESATGLAETPEDQPAEAEVGFAEAYEDGSDATDTGATDEATLETLEHDEFDDE
TGASDAAETETAELDTAEADEAEAHDDNGDGKGGHEPN

Sequences:

>Translated_358_residues
MASLAEKRIVEFEPKVEHAEVSAEQQPQTRPEELRLLEALLFASTEPLEQSALAKRMPDGVDVKAALAQLQADYAHRGVN
LVRIASKWTFRTAGDLAWLMTRETTETRKLSRAAIEMLAIIAYHQPITRAEIEDIRGVVTSKGTLDVLLETGWIRPRGRR
KTPGRPLTFGTTESFLSQFSLEALSDLPGLEELKGSGLLDTRLPTGFNVPTPSDDPTLREDEDPLESGDLELALAPVADP
ETDEVGAAAQAAEAETAWTATVEAEVGESATGLAETPEDQPAEAEVGFAEAYEDGSDATDTGATDEATLETLEHDEFDDE
TGASDAAETETAELDTAEADEAEAHDDNGDGKGGHEPN
>Mature_357_residues
ASLAEKRIVEFEPKVEHAEVSAEQQPQTRPEELRLLEALLFASTEPLEQSALAKRMPDGVDVKAALAQLQADYAHRGVNL
VRIASKWTFRTAGDLAWLMTRETTETRKLSRAAIEMLAIIAYHQPITRAEIEDIRGVVTSKGTLDVLLETGWIRPRGRRK
TPGRPLTFGTTESFLSQFSLEALSDLPGLEELKGSGLLDTRLPTGFNVPTPSDDPTLREDEDPLESGDLELALAPVADPE
TDEVGAAAQAAEAETAWTATVEAEVGESATGLAETPEDQPAEAEVGFAEAYEDGSDATDTGATDEATLETLEHDEFDDET
GASDAAETETAELDTAEADEAEAHDDNGDGKGGHEPN

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 38509; Mature: 38378

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLAEKRIVEFEPKVEHAEVSAEQQPQTRPEELRLLEALLFASTEPLEQSALAKRMPDG
CCCHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
VDVKAALAQLQADYAHRGVNLVRIASKWTFRTAGDLAWLMTRETTETRKLSRAAIEMLAI
CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
IAYHQPITRAEIEDIRGVVTSKGTLDVLLETGWIRPRGRRKTPGRPLTFGTTESFLSQFS
HHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHH
LEALSDLPGLEELKGSGLLDTRLPTGFNVPTPSDDPTLREDEDPLESGDLELALAPVADP
HHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
ETDEVGAAAQAAEAETAWTATVEAEVGESATGLAETPEDQPAEAEVGFAEAYEDGSDATD
CCCHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
TGATDEATLETLEHDEFDDETGASDAAETETAELDTAEADEAEAHDDNGDGKGGHEPN
CCCCCHHHHHHHHCCCCCCCCCCCCCHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASLAEKRIVEFEPKVEHAEVSAEQQPQTRPEELRLLEALLFASTEPLEQSALAKRMPDG
CCHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
VDVKAALAQLQADYAHRGVNLVRIASKWTFRTAGDLAWLMTRETTETRKLSRAAIEMLAI
CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
IAYHQPITRAEIEDIRGVVTSKGTLDVLLETGWIRPRGRRKTPGRPLTFGTTESFLSQFS
HHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHH
LEALSDLPGLEELKGSGLLDTRLPTGFNVPTPSDDPTLREDEDPLESGDLELALAPVADP
HHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
ETDEVGAAAQAAEAETAWTATVEAEVGESATGLAETPEDQPAEAEVGFAEAYEDGSDATD
CCCHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
TGATDEATLETLEHDEFDDETGASDAAETETAELDTAEADEAEAHDDNGDGKGGHEPN
CCCCCHHHHHHHHCCCCCCCCCCCCCHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]