| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749838
Identifier: 86749838
GI number: 86749838
Start: 3106486
End: 3106614
Strand: Reverse
Name: 86749838
Synonym: RPB_2721
Alternate gene names: NA
Gene position: 3106614-3106486 (Counterclockwise)
Preceding gene: 86749840
Following gene: 86749836
Centisome position: 58.27
GC content: 58.14
Gene sequence:
>129_bases ATGGCCAATGAAAAGGGCCCCAATGTCAAGAAGAAGCAGAAGTGCAAGAACTGCGAAGGCAAGGGCACGCTGAAGAAGGG CGACAAGGTGGTGACCTGCCAGCGTTGCAAGGGCACCGGGCTGCGCTGA
Upstream 100 bases:
>100_bases CGCACAAGCCCGGTGTCCTGTCGATATCCCGCGCTGCATCCGGCGAACGATGCTATGCAGCCATCGACGCCGCATCGGCG AACCGCCTCGGGAGACCACC
Downstream 100 bases:
>100_bases TCCGCGCGCATGATCCCGAAAAGTGGAGACCGGTTTTCGGACAAGATCATGCCCTATGTGAGCCCATCGTCGGGAATGTT CAGCACGGTGCCGCAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MANEKGPNVKKKQKCKNCEGKGTLKKGDKVVTCQRCKGTGLR
Sequences:
>Translated_42_residues MANEKGPNVKKKQKCKNCEGKGTLKKGDKVVTCQRCKGTGLR >Mature_41_residues ANEKGPNVKKKQKCKNCEGKGTLKKGDKVVTCQRCKGTGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4594; Mature: 4462
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 11.9 %Cys+Met (Translated Protein) 9.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEKGPNVKKKQKCKNCEGKGTLKKGDKVVTCQRCKGTGLR CCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure ANEKGPNVKKKQKCKNCEGKGTLKKGDKVVTCQRCKGTGLR CCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA