| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is glnA [H]
Identifier: 86749676
GI number: 86749676
Start: 2933968
End: 2935377
Strand: Reverse
Name: glnA [H]
Synonym: RPB_2558
Alternate gene names: 86749676
Gene position: 2935377-2933968 (Counterclockwise)
Preceding gene: 86749677
Following gene: 86749675
Centisome position: 55.06
GC content: 61.7
Gene sequence:
>1410_bases ATGACCACCGCCAAAGAAGTCCTGAAATCCATCAAGGACAACGACGTCAAGTACGTCGATCTTCGTTTCACCGACCCGCG CGGCAAGTGGCAGCACGTCACTTTCGACGTCAGCATGATCGACGAGGAGATCTTCGCCGAGGGCACGATGTTCGACGGTT CCTCGATCGCCGGCTGGAAGGCGATCAATGAATCCGACATGATGCTGATGCTCGACCCGACCACCGCGGTGATCGACCCG TTCTTCGCCGAGACCACCATGGTCATCACCTGCGACATCCTCGAGCCGTCGACCGGTGAGCCCTACAACCGCGACCCGCG CGGCATCGCCAAGAAGGCCGAGGCCCAGGTCAAGGCGATGGGCGTCGGCGACTCGGTGTTCGTCGGTCCGGAAGCCGAGT TCTTCGTGTTCGACGACGTGCGCTATTCGGCGAACCCGTACAACACCGGCTTCAAGCTGGATTCGTCGGAACTGCCGACC AACTCCGACACCGAATACGAGGGCGGCAATCTCGGCCACCGCATCCGCACCAAGGCCGGCTACTTCCCGGTCCCGCCGCA GGATTCGGTGCAGGACATGCGCTCGGAAATGCTCGGCGCGATGGCGCGGATGGGCGTCAAGGTCGAGAAGCATCACCACG AAGTCGCTTCCGCCCAGCACGAGCTCGGCATGAAGTTCGACACCCTGACCCACATGGCCGACCAGATGCAGATCTACAAA TACTGCATCCATCAGGTCGCCCACATCTACGGCAAGACCGCGACCTTCATGCCGAAGCCGGTGTTCGGCGACAACGGCTC GGGCATGCATGTGCACCAGTCGATCTGGAAGGACGGCAAGCCGGTGTTCGCCGGCAACAAATACGCCGACCTGTCCGAGA CCTGCCTGCACTACATCGGCGGCATCATCAGCCACGCCAAGGCGATCAACGCCTTCACCAACCCGTCGACCAATTCCTAC AAGCGCCTGGTCCCCGGCTATGAAGCCCCGGTGCTGCTGGCCTATTCGGCCCGCAACCGTTCGGCTTCCTGCCGCATCCC CTACACCACCAACCCGAAGGCCAAGCGCGTCGAAGTCCGCTTCCCGGATCCGATGGCGAACCCCTATCTCGCCTTCGCCG CGATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCGATCCGGGTCCGGCGATGGACAAGGACCTCTACGATCTG CCGAAGGAAGAGCTGAAGTCGATCCCGACGGTCTGCGGTTCGCTGCGCGAGGCGCTCGAGAATCTCGACAAGGACCGCGC CTTCCTCAAGGCCGGCGGCGTGTTCGACGACGACTTCATCGACGCCTATATCGAGCTGAAGATGACCGAAGTGATGCGCT TCGAAATGACGCCGCACCCGGTCGAGTTCGAGATGTACTACTCGCAGTAA
Upstream 100 bases:
>100_bases TATCACCTCCAGCCTGATCGCATCACCTTGCGGCCGCGTGCGGCCGCAAACGCACGACCACCTTCAGCATTTACGACGAC CTTAAGCACAAGGGGTACTC
Downstream 100 bases:
>100_bases GCCACTCCTCGGCCGGATCGGCCGACGGGCTCGACAACAACCAAGGCGCCCCTCGCGGGGCGCCTTTTTTCGTCGGGCGA ACGGCCGCTCCATGCGGGCA
Product: glutamine synthetase, type I
Products: NA
Alternate protein names: Glutamate--ammonia ligase I; Glutamine synthetase I; GSI [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFAEGTMFDGSSIAGWKAINESDMMLMLDPTTAVIDP FFAETTMVITCDILEPSTGEPYNRDPRGIAKKAEAQVKAMGVGDSVFVGPEAEFFVFDDVRYSANPYNTGFKLDSSELPT NSDTEYEGGNLGHRIRTKAGYFPVPPQDSVQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK YCIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKPVFAGNKYADLSETCLHYIGGIISHAKAINAFTNPSTNSY KRLVPGYEAPVLLAYSARNRSASCRIPYTTNPKAKRVEVRFPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDL PKEELKSIPTVCGSLREALENLDKDRAFLKAGGVFDDDFIDAYIELKMTEVMRFEMTPHPVEFEMYYSQ
Sequences:
>Translated_469_residues MTTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFAEGTMFDGSSIAGWKAINESDMMLMLDPTTAVIDP FFAETTMVITCDILEPSTGEPYNRDPRGIAKKAEAQVKAMGVGDSVFVGPEAEFFVFDDVRYSANPYNTGFKLDSSELPT NSDTEYEGGNLGHRIRTKAGYFPVPPQDSVQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK YCIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKPVFAGNKYADLSETCLHYIGGIISHAKAINAFTNPSTNSY KRLVPGYEAPVLLAYSARNRSASCRIPYTTNPKAKRVEVRFPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDL PKEELKSIPTVCGSLREALENLDKDRAFLKAGGVFDDDFIDAYIELKMTEVMRFEMTPHPVEFEMYYSQ >Mature_468_residues TTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFAEGTMFDGSSIAGWKAINESDMMLMLDPTTAVIDPF FAETTMVITCDILEPSTGEPYNRDPRGIAKKAEAQVKAMGVGDSVFVGPEAEFFVFDDVRYSANPYNTGFKLDSSELPTN SDTEYEGGNLGHRIRTKAGYFPVPPQDSVQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYKY CIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKPVFAGNKYADLSETCLHYIGGIISHAKAINAFTNPSTNSYK RLVPGYEAPVLLAYSARNRSASCRIPYTTNPKAKRVEVRFPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDLP KEELKSIPTVCGSLREALENLDKDRAFLKAGGVFDDDFIDAYIELKMTEVMRFEMTPHPVEFEMYYSQ
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=416, Percent_Identity=23.7980769230769, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1790301, Length=467, Percent_Identity=64.6680942184154, Blast_Score=635, Evalue=0.0, Organism=Escherichia coli, GI87081870, Length=472, Percent_Identity=24.7881355932203, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 52463; Mature: 52332
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFAEGTMFDGSSIAGWK CCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCE AINESDMMLMLDPTTAVIDPFFAETTMVITCDILEPSTGEPYNRDPRGIAKKAEAQVKAM EECCCCEEEEECCCHHHHCHHHHCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEE GVGDSVFVGPEAEFFVFDDVRYSANPYNTGFKLDSSELPTNSDTEYEGGNLGHRIRTKAG CCCCEEEECCCCCEEEEECCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCC YFPVPPQDSVQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH YCIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKPVFAGNKYADLSETCLHYIG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHH GIISHAKAINAFTNPSTNSYKRLVPGYEAPVLLAYSARNRSASCRIPYTTNPKAKRVEVR HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEE FPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDLPKEELKSIPTVCGSLREALE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH NLDKDRAFLKAGGVFDDDFIDAYIELKMTEVMRFEMTPHPVEFEMYYSQ HCCHHHHHHHCCCCCCHHHHHHHHHEEEHHHHEECCCCCCEEEEEEECC >Mature Secondary Structure TTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFAEGTMFDGSSIAGWK CCHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCE AINESDMMLMLDPTTAVIDPFFAETTMVITCDILEPSTGEPYNRDPRGIAKKAEAQVKAM EECCCCEEEEECCCHHHHCHHHHCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEE GVGDSVFVGPEAEFFVFDDVRYSANPYNTGFKLDSSELPTNSDTEYEGGNLGHRIRTKAG CCCCEEEECCCCCEEEEECCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCC YFPVPPQDSVQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH YCIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKPVFAGNKYADLSETCLHYIG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHH GIISHAKAINAFTNPSTNSYKRLVPGYEAPVLLAYSARNRSASCRIPYTTNPKAKRVEVR HHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEE FPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDLPKEELKSIPTVCGSLREALE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH NLDKDRAFLKAGGVFDDDFIDAYIELKMTEVMRFEMTPHPVEFEMYYSQ HCCHHHHHHHCCCCCCHHHHHHHHHEEEHHHHEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275; 2859270; 2793830 [H]