| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749650
Identifier: 86749650
GI number: 86749650
Start: 2889282
End: 2890106
Strand: Reverse
Name: 86749650
Synonym: RPB_2530
Alternate gene names: NA
Gene position: 2890106-2889282 (Counterclockwise)
Preceding gene: 86749651
Following gene: 86749649
Centisome position: 54.21
GC content: 60.24
Gene sequence:
>825_bases ATGAATGCCGCGCTTGGATCATCGCTCTCCCGCTCGCTCGTCGCCGAGCTCGGCGATGATTGCGCTGCCGCGGCCAAACT GGCCGCCGCCATCACGCTACGCAGATCTGGATCGATCGACGAGGCAAGCCTGCCGGCGCTTTCGCGACCCGTTCTCGACC GGATCTCCGCAGATTTCGTGCGCCGTGGATGGCTAACGCCTTTGGTGTCCGGGTGGCTCATTGGACCCGCCGCCTTGCCA AGTGAGGTGGGGGCATTTTTGGAAGGTGCGGCGGCTATGCGAACCCATGACTCCTCTAAAGAGACGGCGATTGCGGTCGT CACGATGCCGCCACCTCCGAGCGCGATCGGGGTCGCGCTTTCCCAAACAGGCGTCGCTCATAGCTCCCTAGTCCCCACGA ATGACGCATTTTTACGTGTCGCTGCCACCGCCATCGACAGTTTCATTCTCATGACGCCATTTCTAAACACCGAGGGACTA AGATATGCCGTCAAACTGTTTTCAGACACGCGTGCCCAGCAGAAACGCCTCATCGTGCGGCGCGCCGGCGACGCGACCCG CGTCGTTCAAGAACACGCAGCAGAACTTTCAACGATCGGCGTGGAAGCCTTCGACTATACTGTCGATCTGGGCGATGGCT TCGAAACTTTCCACGCCAAGGTCGCGCTCGCCGATTCCGCCCTTGCCTATGTCGGCAGCGCCAACATGACCGTATTTGCA CGCCATTCTATGGACCTTGGCATCCTCGTTGAAGGACGGTCCGCGCGGGTAATTGCGAACGTGATCCGCGCAGTGCTGCG CGTTGCGAAGCCTTTGCAGATTTGA
Upstream 100 bases:
>100_bases TGATAGGCCGCGGTCAGCCGCGCTGGGACGCCGAAGGCCGCGCGTTGATCGGATACTACGACGTTGCCCGTAGACGAGCG GCAGCGGCCCCGGTCGATCC
Downstream 100 bases:
>100_bases ACGCCCACCGGCTGGCGTAGTGATCGGAGATCTCTCCCTATAATGCCAGCTTTCGCGTTGTGTGGCCGTTTTGACGTAGG GGGCCCACTTTGCTTCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNAALGSSLSRSLVAELGDDCAAAAKLAAAITLRRSGSIDEASLPALSRPVLDRISADFVRRGWLTPLVSGWLIGPAALP SEVGAFLEGAAAMRTHDSSKETAIAVVTMPPPPSAIGVALSQTGVAHSSLVPTNDAFLRVAATAIDSFILMTPFLNTEGL RYAVKLFSDTRAQQKRLIVRRAGDATRVVQEHAAELSTIGVEAFDYTVDLGDGFETFHAKVALADSALAYVGSANMTVFA RHSMDLGILVEGRSARVIANVIRAVLRVAKPLQI
Sequences:
>Translated_274_residues MNAALGSSLSRSLVAELGDDCAAAAKLAAAITLRRSGSIDEASLPALSRPVLDRISADFVRRGWLTPLVSGWLIGPAALP SEVGAFLEGAAAMRTHDSSKETAIAVVTMPPPPSAIGVALSQTGVAHSSLVPTNDAFLRVAATAIDSFILMTPFLNTEGL RYAVKLFSDTRAQQKRLIVRRAGDATRVVQEHAAELSTIGVEAFDYTVDLGDGFETFHAKVALADSALAYVGSANMTVFA RHSMDLGILVEGRSARVIANVIRAVLRVAKPLQI >Mature_274_residues MNAALGSSLSRSLVAELGDDCAAAAKLAAAITLRRSGSIDEASLPALSRPVLDRISADFVRRGWLTPLVSGWLIGPAALP SEVGAFLEGAAAMRTHDSSKETAIAVVTMPPPPSAIGVALSQTGVAHSSLVPTNDAFLRVAATAIDSFILMTPFLNTEGL RYAVKLFSDTRAQQKRLIVRRAGDATRVVQEHAAELSTIGVEAFDYTVDLGDGFETFHAKVALADSALAYVGSANMTVFA RHSMDLGILVEGRSARVIANVIRAVLRVAKPLQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28805; Mature: 28805
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAALGSSLSRSLVAELGDDCAAAAKLAAAITLRRSGSIDEASLPALSRPVLDRISADFV CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHH RRGWLTPLVSGWLIGPAALPSEVGAFLEGAAAMRTHDSSKETAIAVVTMPPPPSAIGVAL HHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH SQTGVAHSSLVPTNDAFLRVAATAIDSFILMTPFLNTEGLRYAVKLFSDTRAQQKRLIVR HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RAGDATRVVQEHAAELSTIGVEAFDYTVDLGDGFETFHAKVALADSALAYVGSANMTVFA CCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHEEEEHHHHHHHHCCCCEEEEE RHSMDLGILVEGRSARVIANVIRAVLRVAKPLQI ECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNAALGSSLSRSLVAELGDDCAAAAKLAAAITLRRSGSIDEASLPALSRPVLDRISADFV CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHH RRGWLTPLVSGWLIGPAALPSEVGAFLEGAAAMRTHDSSKETAIAVVTMPPPPSAIGVAL HHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH SQTGVAHSSLVPTNDAFLRVAATAIDSFILMTPFLNTEGLRYAVKLFSDTRAQQKRLIVR HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RAGDATRVVQEHAAELSTIGVEAFDYTVDLGDGFETFHAKVALADSALAYVGSANMTVFA CCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHEEEEHHHHHHHHCCCCEEEEE RHSMDLGILVEGRSARVIANVIRAVLRVAKPLQI ECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA