| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749629
Identifier: 86749629
GI number: 86749629
Start: 2870268
End: 2870564
Strand: Reverse
Name: 86749629
Synonym: RPB_2509
Alternate gene names: NA
Gene position: 2870564-2870268 (Counterclockwise)
Preceding gene: 86749630
Following gene: 86749625
Centisome position: 53.84
GC content: 65.32
Gene sequence:
>297_bases ATGAGCGAAGACTGGAATACGAAGTACGGCGTGCGCCGCGTGCGGCGGGATCCTCCGACGCTGGAGGAAGCGATTTTTGC CGCCATGGGTATCACCGACGATCTGGAATCGCAGGCCGAAATCGCCGCATCGCTGATGGGTCTGCCGGTCGAGCAGGTGC AGAGCGAAGTACGCAAGGCCGGCCGTGCCGCCGCACGGACGACGCGGGTGATCACCGGCGAACAAGGCAGCCAGCGTTCG GTCGTCGTCGAGCGGCGCGTATCGCGCCGGGTGATCGGCAACGACAAACGCGTCTGA
Upstream 100 bases:
>100_bases GCGGTTGGTATCGACCAAGGTCTGCCGCGCGCCGCCGATTCAATATTGCATTGCAGCATCGGCTCTACTAGGTATTCCCC AACAAACCTCGGGGCGGTCG
Downstream 100 bases:
>100_bases ACGGCGGACGACGCCCGAAGCCTCTGCTTTCAGCGAGCTCTGCTTTTCAGCAACGACGCACAACGAAGAACGCCGCGGGC ATCAGCACGCGGCGCTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSEDWNTKYGVRRVRRDPPTLEEAIFAAMGITDDLESQAEIAASLMGLPVEQVQSEVRKAGRAAARTTRVITGEQGSQRS VVVERRVSRRVIGNDKRV
Sequences:
>Translated_98_residues MSEDWNTKYGVRRVRRDPPTLEEAIFAAMGITDDLESQAEIAASLMGLPVEQVQSEVRKAGRAAARTTRVITGEQGSQRS VVVERRVSRRVIGNDKRV >Mature_97_residues SEDWNTKYGVRRVRRDPPTLEEAIFAAMGITDDLESQAEIAASLMGLPVEQVQSEVRKAGRAAARTTRVITGEQGSQRSV VVERRVSRRVIGNDKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10912; Mature: 10780
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDWNTKYGVRRVRRDPPTLEEAIFAAMGITDDLESQAEIAASLMGLPVEQVQSEVRKA CCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH GRAAARTTRVITGEQGSQRSVVVERRVSRRVIGNDKRV HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEDWNTKYGVRRVRRDPPTLEEAIFAAMGITDDLESQAEIAASLMGLPVEQVQSEVRKA CCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH GRAAARTTRVITGEQGSQRSVVVERRVSRRVIGNDKRV HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA