| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is qheDH [H]
Identifier: 86749475
GI number: 86749475
Start: 2705490
End: 2707682
Strand: Direct
Name: qheDH [H]
Synonym: RPB_2355
Alternate gene names: 86749475
Gene position: 2705490-2707682 (Clockwise)
Preceding gene: 86749474
Following gene: 86749476
Centisome position: 50.74
GC content: 65.34
Gene sequence:
>2193_bases ATGAAACAGCCTGCCGTGTCGGTGTGGTTTGCGCACCGATTCCTCCGCGACAACGCGACATCACGATCCGCAACATCCAC AAAGAGAGACCTGAAACTCGGTGCCGCCGCGCTGATCGCCGCGGCACTGTTTCACGGCGGCGCGTTCGCGCAGAACGCGA AGGGCTCCGCCGATCATATCCGCGCCGCGACCGGCGCGATCGACAGCGCCGCCATCATCGCCAACGCCAAGACCACCAAC GACTGGCCGAGCTACGGGCTCGACTACGCGGAGACGCGCTTCAGCAAGCTCGACCGGATCAATGTCGACAACGTCAAGCA GCTCGGCCTGCAGTGGAGCTACAGTCTTGGTTCGGATCGCGGCGTCGAGGCGACACCGGTGGTGGTCGACGGCATCATGT ACGTCACCGCGTCGTGGAGCGTTGTTCACGCGGTCGATACCCGGACCGGCAAGAAGCTGTGGACCTACGACCCCGGCGTC GACCGCTCGAAGGGCTATCGCGGCTGCTGCGACGTCGTGAACCGCGGCGTCGCGCTGTACAAGGGCAAGGTGTTCGTCGG CGCCTATGACGGACGCCTCGTCGCGCTGGATGCCGCGACCGGCAAGGTGGTCTGGGAAAAGGACACCGTGATCGACCACG GCTATTCCTACACCATCACCGGCGCGCCGCGGGTGTTCAACGGCAAGGTGGTGATCGGCAATGGCGGCGCCGAATACGGC GCGCGCGGCTACGTCACCGCTTACGACGCGGAGACCGGCAACCAGGCCTGGCGCTGGTTCACGGTGCCCGGTGATCCGTC GAAGCCGTTCGAGGACGCCTCGATGGAAGCGGCGGCCAAGACCTGGGATCCGGCCGGCAAATGGTGGGTCAATGGCGGCG GCGGCACCGCGTGGGACAGCATCACCTTCGATCCCGACCTCAACATGGTCTATATCGGCACCGGCAACGGCTCGCCCTGG GCCCGGCATCTGCGCAGTCCCGCCGGCGGCGACAATCTGTATCTCGGTTCGATCGTGGCGCTGAACGCCGACACCGGCAA GTACGTCTGGCACTATCAGGAGACGCCCGGCGACAATTGGGACTACACCTCGACCCAGCCGATGATCCTGGCCGATCTCA CCATCGACGGCCAGCCGCGCAAGGTGGTGCTGCACGCGCCGAAGAACGGCTTCTTCTTCGTGATCGACCGCACCAACGGC AAGTTCATCTCGGCCAAGAACTTCGTCGAGGTGAACTGGGCGACCGGCTACGACGCCAACGGCCGGCCGATCGAAAATCC GGAAGCGCGCGACCCGACCAAATCGTTCGACAGCATTCCGGGCCCGTACGGCGCGCACAACTGGCACCCGATGTCGTTCA ATCCGCAGACCGGGCTGGTGTATCTGCCGGCGCAAGGCGTACCCATCAATCTGACGGGTGAGAAAGCGCTGACCCAGAAC AAGATGGAGCCGTTCAAATTCGGCAGCACCACCGGCTGGAACGTCGGCTTCACGCTGAACGCCGTGCCGCCGAAGAACCT GCCGTTCGGCCGGCTGCTGGCGTGGGATCCGGTGCAGCAGAAGGAGGTCTGGCGCGCCGAATATGTCGCGCCATGGAACG GCGGCACGCTCACCACCGCGGGCAATCTGGTGTTCCAGGGCACCGCGGACGGGCGCTTCGTCGCCTACAACGCCAAGACC GGCGAGAAGCTCTGGGAAAGCCCGCTCGGCACCGGCGCGGTGGCGGCGCCGGCCACCTACATGGTCGACGGCGTGCAATA CGTCTCGATCGCGGTCGGCTGGGGCGGCGTGTTCGGCATCAGCCAGCGCGCCACGGAGAAGGAAGCGCCGGGCACGGTCT ACACCTTCGCGGTGGGCGGCAAGGCGCCGATGCCGGAATTCACCAAGTATCAGATGGGCAATCTGCTGACCGGGATCGAA TACGATCCGAAGGACGTGCCGGAAGGCACCGCGATCTATGTCGCGGCCTGCGCCACCTGCCACGGCGTGCCGGGCGTTGA CCGCGGCGGCAACGTCAAGAATCTCGGCTACACGTCGACCGAGAACATCGCCCATCTGAAGGACATCGTGTTCAAGGGCC CGTACCGCGACAAGGGCATGCCGGACTTCACCGGCAAGCTCACCGAGGCGGATGTGGTCAAGATCCAGGCCTTCATCCAG GGCACCGCGGACGCGATCCGGCCGAAGAAATAG
Upstream 100 bases:
>100_bases CATGCGATACAACTCGTAGCACGTGCGTCCTTGGTTGACGCTCGCATCAACGCGCGCAACACTCCCGGCCAGGCCCGTCA GAGGCCATAGGGAGCGAAGC
Downstream 100 bases:
>100_bases CGGCGCGCCCCTGTCGGCCGGGAGCGCCGGCCGACAGGCAGGGCTGTCGAAGCCTCGACCTGTCGGCGGGCCTGTCCAGG CGGGCCCGCCGATCGCCGTT
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MKQPAVSVWFAHRFLRDNATSRSATSTKRDLKLGAAALIAAALFHGGAFAQNAKGSADHIRAATGAIDSAAIIANAKTTN DWPSYGLDYAETRFSKLDRINVDNVKQLGLQWSYSLGSDRGVEATPVVVDGIMYVTASWSVVHAVDTRTGKKLWTYDPGV DRSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLVALDAATGKVVWEKDTVIDHGYSYTITGAPRVFNGKVVIGNGGAEYG ARGYVTAYDAETGNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWVNGGGGTAWDSITFDPDLNMVYIGTGNGSPW ARHLRSPAGGDNLYLGSIVALNADTGKYVWHYQETPGDNWDYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNG KFISAKNFVEVNWATGYDANGRPIENPEARDPTKSFDSIPGPYGAHNWHPMSFNPQTGLVYLPAQGVPINLTGEKALTQN KMEPFKFGSTTGWNVGFTLNAVPPKNLPFGRLLAWDPVQQKEVWRAEYVAPWNGGTLTTAGNLVFQGTADGRFVAYNAKT GEKLWESPLGTGAVAAPATYMVDGVQYVSIAVGWGGVFGISQRATEKEAPGTVYTFAVGGKAPMPEFTKYQMGNLLTGIE YDPKDVPEGTAIYVAACATCHGVPGVDRGGNVKNLGYTSTENIAHLKDIVFKGPYRDKGMPDFTGKLTEADVVKIQAFIQ GTADAIRPKK
Sequences:
>Translated_730_residues MKQPAVSVWFAHRFLRDNATSRSATSTKRDLKLGAAALIAAALFHGGAFAQNAKGSADHIRAATGAIDSAAIIANAKTTN DWPSYGLDYAETRFSKLDRINVDNVKQLGLQWSYSLGSDRGVEATPVVVDGIMYVTASWSVVHAVDTRTGKKLWTYDPGV DRSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLVALDAATGKVVWEKDTVIDHGYSYTITGAPRVFNGKVVIGNGGAEYG ARGYVTAYDAETGNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWVNGGGGTAWDSITFDPDLNMVYIGTGNGSPW ARHLRSPAGGDNLYLGSIVALNADTGKYVWHYQETPGDNWDYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNG KFISAKNFVEVNWATGYDANGRPIENPEARDPTKSFDSIPGPYGAHNWHPMSFNPQTGLVYLPAQGVPINLTGEKALTQN KMEPFKFGSTTGWNVGFTLNAVPPKNLPFGRLLAWDPVQQKEVWRAEYVAPWNGGTLTTAGNLVFQGTADGRFVAYNAKT GEKLWESPLGTGAVAAPATYMVDGVQYVSIAVGWGGVFGISQRATEKEAPGTVYTFAVGGKAPMPEFTKYQMGNLLTGIE YDPKDVPEGTAIYVAACATCHGVPGVDRGGNVKNLGYTSTENIAHLKDIVFKGPYRDKGMPDFTGKLTEADVVKIQAFIQ GTADAIRPKK >Mature_730_residues MKQPAVSVWFAHRFLRDNATSRSATSTKRDLKLGAAALIAAALFHGGAFAQNAKGSADHIRAATGAIDSAAIIANAKTTN DWPSYGLDYAETRFSKLDRINVDNVKQLGLQWSYSLGSDRGVEATPVVVDGIMYVTASWSVVHAVDTRTGKKLWTYDPGV DRSKGYRGCCDVVNRGVALYKGKVFVGAYDGRLVALDAATGKVVWEKDTVIDHGYSYTITGAPRVFNGKVVIGNGGAEYG ARGYVTAYDAETGNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWVNGGGGTAWDSITFDPDLNMVYIGTGNGSPW ARHLRSPAGGDNLYLGSIVALNADTGKYVWHYQETPGDNWDYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNG KFISAKNFVEVNWATGYDANGRPIENPEARDPTKSFDSIPGPYGAHNWHPMSFNPQTGLVYLPAQGVPINLTGEKALTQN KMEPFKFGSTTGWNVGFTLNAVPPKNLPFGRLLAWDPVQQKEVWRAEYVAPWNGGTLTTAGNLVFQGTADGRFVAYNAKT GEKLWESPLGTGAVAAPATYMVDGVQYVSIAVGWGGVFGISQRATEKEAPGTVYTFAVGGKAPMPEFTKYQMGNLLTGIE YDPKDVPEGTAIYVAACATCHGVPGVDRGGNVKNLGYTSTENIAHLKDIVFKGPYRDKGMPDFTGKLTEADVVKIQAFIQ GTADAIRPKK
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=642, Percent_Identity=26.6355140186916, Blast_Score=162, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 78837; Mature: 78837
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00364 BACTERIAL_PQQ_2 ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPAVSVWFAHRFLRDNATSRSATSTKRDLKLGAAALIAAALFHGGAFAQNAKGSADHI CCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH RAATGAIDSAAIIANAKTTNDWPSYGLDYAETRFSKLDRINVDNVKQLGLQWSYSLGSDR HHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCC GVEATPVVVDGIMYVTASWSVVHAVDTRTGKKLWTYDPGVDRSKGYRGCCDVVNRGVALY CCEECCEEEEEEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHCCEEEE KGKVFVGAYDGRLVALDAATGKVVWEKDTVIDHGYSYTITGAPRVFNGKVVIGNGGAEYG ECEEEEEEECCEEEEEECCCCEEEEECCCEEECCEEEEECCCCEEECCEEEECCCCCCCC ARGYVTAYDAETGNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWVNGGGGTAWDS CCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCC ITFDPDLNMVYIGTGNGSPWARHLRSPAGGDNLYLGSIVALNADTGKYVWHYQETPGDNW EEECCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCC DYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNGKFISAKNFVEVNWATGYDAN CCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEEEECCCCCC GRPIENPEARDPTKSFDSIPGPYGAHNWHPMSFNPQTGLVYLPAQGVPINLTGEKALTQN CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHC KMEPFKFGSTTGWNVGFTLNAVPPKNLPFGRLLAWDPVQQKEVWRAEYVAPWNGGTLTTA CCCCEECCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHEEECCCCCCEEEEC GNLVFQGTADGRFVAYNAKTGEKLWESPLGTGAVAAPATYMVDGVQYVSIAVGWGGVFGI CCEEEEECCCCEEEEEECCCCHHHHHCCCCCCCHHCCHHEEECCEEEEEEEEECCCEECC SQRATEKEAPGTVYTFAVGGKAPMPEFTKYQMGNLLTGIEYDPKDVPEGTAIYVAACATC CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCEEECCCCCCCCCCCCCEEEEEEEHHH HGVPGVDRGGNVKNLGYTSTENIAHLKDIVFKGPYRDKGMPDFTGKLTEADVVKIQAFIQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHH GTADAIRPKK CCHHHCCCCC >Mature Secondary Structure MKQPAVSVWFAHRFLRDNATSRSATSTKRDLKLGAAALIAAALFHGGAFAQNAKGSADHI CCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH RAATGAIDSAAIIANAKTTNDWPSYGLDYAETRFSKLDRINVDNVKQLGLQWSYSLGSDR HHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCC GVEATPVVVDGIMYVTASWSVVHAVDTRTGKKLWTYDPGVDRSKGYRGCCDVVNRGVALY CCEECCEEEEEEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHCCEEEE KGKVFVGAYDGRLVALDAATGKVVWEKDTVIDHGYSYTITGAPRVFNGKVVIGNGGAEYG ECEEEEEEECCEEEEEECCCCEEEEECCCEEECCEEEEECCCCEEECCEEEECCCCCCCC ARGYVTAYDAETGNQAWRWFTVPGDPSKPFEDASMEAAAKTWDPAGKWWVNGGGGTAWDS CCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCC ITFDPDLNMVYIGTGNGSPWARHLRSPAGGDNLYLGSIVALNADTGKYVWHYQETPGDNW EEECCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCC DYTSTQPMILADLTIDGQPRKVVLHAPKNGFFFVIDRTNGKFISAKNFVEVNWATGYDAN CCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEEEECCCCCC GRPIENPEARDPTKSFDSIPGPYGAHNWHPMSFNPQTGLVYLPAQGVPINLTGEKALTQN CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHC KMEPFKFGSTTGWNVGFTLNAVPPKNLPFGRLLAWDPVQQKEVWRAEYVAPWNGGTLTTA CCCCEECCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHEEECCCCCCEEEEC GNLVFQGTADGRFVAYNAKTGEKLWESPLGTGAVAAPATYMVDGVQYVSIAVGWGGVFGI CCEEEEECCCCEEEEEECCCCHHHHHCCCCCCCHHCCHHEEECCEEEEEEEEECCCEECC SQRATEKEAPGTVYTFAVGGKAPMPEFTKYQMGNLLTGIEYDPKDVPEGTAIYVAACATC CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCEEECCCCCCCCCCCCCEEEEEEEHHH HGVPGVDRGGNVKNLGYTSTENIAHLKDIVFKGPYRDKGMPDFTGKLTEADVVKIQAFIQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHH GTADAIRPKK CCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]