| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749407
Identifier: 86749407
GI number: 86749407
Start: 2643180
End: 2645246
Strand: Direct
Name: 86749407
Synonym: RPB_2287
Alternate gene names: NA
Gene position: 2643180-2645246 (Clockwise)
Preceding gene: 86749406
Following gene: 86749408
Centisome position: 49.58
GC content: 64.68
Gene sequence:
>2067_bases ATGTTTGACCTTGCGATCGTTGGTGGCGGCCCGGGCGGACTGATGAGCGCCTGGTACCTGAAGAAGAAGCTGGGCCCGCT GTGCCGGGTGACGATTTTCGAGGCGTCCGACCGGCTCGGCGGCAAGATCGTGTCCCGCACCTTCGACACCGCGCCGGCGC TGTACGAGGCCGGCGTCGCCGAATTGTACGACTACTCGATGACCGGGCCGGACCCGCTGCGCGAACTGGTGCAGCATTTC GGGCTGCAGACGATTCCGATGGACGCCGAGCAGGTCCAGCTCGACGGCGAATTGCTCGACGACGTGCCGGGGATGCGCCG GAAGTACGGCGACAAGACCGCCGACGCCATTCTCGCCTTCCGCAAGACCTGCAGCGAGATGGTGACGCCGCTGGAGTACT ACGAGGGCGTCGGCGCGCACGACAACGAGCATCCCTGGGCCTGGACCAATTGCGAGCAACTGCTCGACAAGGAGATCGAC GACCCGGTCGCCAAGCGTTTCTTCAAGGTGATGGCGCGGTCCGACATCGCCACCGAGAGCCACAACACCAACGGCCTCAA CGCGCTGAAGAATTTCGTGATGGATATCGACGGCTATATCGGCCTGTATTCGATCCAGAACGGCAACGAGCAACTGATCG AGGGGCTGCGCTCCGAGGTCGACGCCGAGATCCAGCTCAACCACCGCATTCTCAAGGTCGGCAAGACCGCGAGCGGCCGC TACGAGCTGAACATGATGAACGGCAAGGGCCCGGAGACGCGCGACTTCGATCTCGTGCTGATGTGCCTGCCGCACAACTG GCTCGCGACGCTCGGCTGGGGCGACGAGCAGCTGCGCAAGGCCATGGTCAAGCACGTCGCCTATTTCGACCGGCCGGCGC ACTATCTGCGGATCTCGCTGCTGTTCGACAGCCCGTTCTGGGGCGACAAGATCCCCGGCGCCTGGTTCATGTCGGAGGCG TTCGGCGGCTGCTGCGTCTACAACGAGGGCGCGCGCCACGACGTCGGCAAATACGGCGTGCTGAACTTCCTGGTCGCCGG CTCCGACGCGCTGGCGTTCTCGAATCTGACCGACGGCGAACTGACCGACCTGGCGCTGAAGTCGCTGCCGGCGGCATTCG GCGACGCGCGCGAGCATTTCATGGAAGGCAAGACCCATCGCTGGCTGTCGTCGGTGAATTGCATCCCCGGCGGCCTGCCG GTGCGCGACGTGATGACCAATCACCGGCCCGAGCCGAAGAATCATCCGGGCTTCGTCGTGGTCGGCGACTATCTGTTCGA TTCGACGCTGAACGGCCTGCTGGATTCCTCCGACGCCGCCACCGACATCATCGTCACCGAGACGATGAAGCTGCGCCGCG CCCGCGCGCTCGCGGGCCAGCCCGGGTCGGACAAGATCGACGCCTCGTATTTTGCCAATTATCGCAACCAGGGGCCGTAT GCCGAGGTCTGGAGCCGGTTCACCGACCCCGACTATCTGCTGGCGATGATCAGGACGGTCTGGGACGTGCCGCAGGGCGT CAAACTGCTGGTCGCGGGCTCCGCCAGCGGCGAGCTGGTCGGCGCGCTGCGCGAGCGCGGCATCGATGCCTGGGGCGTCG ACAACAATCGCGGCATTCTCGCCAAGACGCCGGAGGCGCTGAAGCCGTTCAACCAGTTCGGCTCGATCGTCGACCTGCCG TTCGAGGACGCTTCGTTCGACCTCGTGTTCGAGACCAGCCTGTGCCACGTCCCGGAGAACCGCGTGGTCAAGGCGATCCG CGAACTCAACCGGGTGACGCGCACCGGCCTGGTGTTCGGCTCGGTGACCAGCGACATGGAACCCATCGTGATCGACGACT ACGATCTGCTGCGCGGCGTCAAGAAGCTCGGCACCTGGTGGGAGTGGTCGGAACTGTTCTTCAGCAACGGCTTCGATCTG TCGATGCATCGCAACGACGTCAGCGACAAGCTCTGGGAAGCGACGCTGAAGGCCGGCAAGGGTCCGGGCCAGTGGTACGG CGACGCGGACAGCCTGCGCTACTCGTTCTTCGACAAGGTCGACGACGACGAAGACGACGAAGACTGA
Upstream 100 bases:
>100_bases CTGATTTTCGCACAGAATCGGTCTGCCGGGCGCCGGCGGAGCGGATCGGGTATGGCTGCGCGCGGCTGGACGGCCTGCGC CGATGTGTTGAAAGAACCAG
Downstream 100 bases:
>100_bases GCGCTTTGCCCGCCCCGAGATGATAGCTTAGGATACGCCGCGGCTCGCGAGTCACGGCGCTCGTCATTGCGGTCGTACTG GCCGTCCACCAACGGTTCGA
Product: methyltransferase type 11
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MFDLAIVGGGPGGLMSAWYLKKKLGPLCRVTIFEASDRLGGKIVSRTFDTAPALYEAGVAELYDYSMTGPDPLRELVQHF GLQTIPMDAEQVQLDGELLDDVPGMRRKYGDKTADAILAFRKTCSEMVTPLEYYEGVGAHDNEHPWAWTNCEQLLDKEID DPVAKRFFKVMARSDIATESHNTNGLNALKNFVMDIDGYIGLYSIQNGNEQLIEGLRSEVDAEIQLNHRILKVGKTASGR YELNMMNGKGPETRDFDLVLMCLPHNWLATLGWGDEQLRKAMVKHVAYFDRPAHYLRISLLFDSPFWGDKIPGAWFMSEA FGGCCVYNEGARHDVGKYGVLNFLVAGSDALAFSNLTDGELTDLALKSLPAAFGDAREHFMEGKTHRWLSSVNCIPGGLP VRDVMTNHRPEPKNHPGFVVVGDYLFDSTLNGLLDSSDAATDIIVTETMKLRRARALAGQPGSDKIDASYFANYRNQGPY AEVWSRFTDPDYLLAMIRTVWDVPQGVKLLVAGSASGELVGALRERGIDAWGVDNNRGILAKTPEALKPFNQFGSIVDLP FEDASFDLVFETSLCHVPENRVVKAIRELNRVTRTGLVFGSVTSDMEPIVIDDYDLLRGVKKLGTWWEWSELFFSNGFDL SMHRNDVSDKLWEATLKAGKGPGQWYGDADSLRYSFFDKVDDDEDDED
Sequences:
>Translated_688_residues MFDLAIVGGGPGGLMSAWYLKKKLGPLCRVTIFEASDRLGGKIVSRTFDTAPALYEAGVAELYDYSMTGPDPLRELVQHF GLQTIPMDAEQVQLDGELLDDVPGMRRKYGDKTADAILAFRKTCSEMVTPLEYYEGVGAHDNEHPWAWTNCEQLLDKEID DPVAKRFFKVMARSDIATESHNTNGLNALKNFVMDIDGYIGLYSIQNGNEQLIEGLRSEVDAEIQLNHRILKVGKTASGR YELNMMNGKGPETRDFDLVLMCLPHNWLATLGWGDEQLRKAMVKHVAYFDRPAHYLRISLLFDSPFWGDKIPGAWFMSEA FGGCCVYNEGARHDVGKYGVLNFLVAGSDALAFSNLTDGELTDLALKSLPAAFGDAREHFMEGKTHRWLSSVNCIPGGLP VRDVMTNHRPEPKNHPGFVVVGDYLFDSTLNGLLDSSDAATDIIVTETMKLRRARALAGQPGSDKIDASYFANYRNQGPY AEVWSRFTDPDYLLAMIRTVWDVPQGVKLLVAGSASGELVGALRERGIDAWGVDNNRGILAKTPEALKPFNQFGSIVDLP FEDASFDLVFETSLCHVPENRVVKAIRELNRVTRTGLVFGSVTSDMEPIVIDDYDLLRGVKKLGTWWEWSELFFSNGFDL SMHRNDVSDKLWEATLKAGKGPGQWYGDADSLRYSFFDKVDDDEDDED >Mature_688_residues MFDLAIVGGGPGGLMSAWYLKKKLGPLCRVTIFEASDRLGGKIVSRTFDTAPALYEAGVAELYDYSMTGPDPLRELVQHF GLQTIPMDAEQVQLDGELLDDVPGMRRKYGDKTADAILAFRKTCSEMVTPLEYYEGVGAHDNEHPWAWTNCEQLLDKEID DPVAKRFFKVMARSDIATESHNTNGLNALKNFVMDIDGYIGLYSIQNGNEQLIEGLRSEVDAEIQLNHRILKVGKTASGR YELNMMNGKGPETRDFDLVLMCLPHNWLATLGWGDEQLRKAMVKHVAYFDRPAHYLRISLLFDSPFWGDKIPGAWFMSEA FGGCCVYNEGARHDVGKYGVLNFLVAGSDALAFSNLTDGELTDLALKSLPAAFGDAREHFMEGKTHRWLSSVNCIPGGLP VRDVMTNHRPEPKNHPGFVVVGDYLFDSTLNGLLDSSDAATDIIVTETMKLRRARALAGQPGSDKIDASYFANYRNQGPY AEVWSRFTDPDYLLAMIRTVWDVPQGVKLLVAGSASGELVGALRERGIDAWGVDNNRGILAKTPEALKPFNQFGSIVDLP FEDASFDLVFETSLCHVPENRVVKAIRELNRVTRTGLVFGSVTSDMEPIVIDDYDLLRGVKKLGTWWEWSELFFSNGFDL SMHRNDVSDKLWEATLKAGKGPGQWYGDADSLRYSFFDKVDDDEDDED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76723; Mature: 76723
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLAIVGGGPGGLMSAWYLKKKLGPLCRVTIFEASDRLGGKIVSRTFDTAPALYEAGVA CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHH ELYDYSMTGPDPLRELVQHFGLQTIPMDAEQVQLDGELLDDVPGMRRKYGDKTADAILAF HHHHCCCCCHHHHHHHHHHCCCEECCCCHHHHEECCHHHHCCCHHHHHCCCHHHHHHHHH RKTCSEMVTPLEYYEGVGAHDNEHPWAWTNCEQLLDKEIDDPVAKRFFKVMARSDIATES HHHHHHHHCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC HNTNGLNALKNFVMDIDGYIGLYSIQNGNEQLIEGLRSEVDAEIQLNHRILKVGKTASGR CCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCEEEEECCCCCCE YELNMMNGKGPETRDFDLVLMCLPHNWLATLGWGDEQLRKAMVKHVAYFDRPAHYLRISL EEEEEECCCCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEE LFDSPFWGDKIPGAWFMSEAFGGCCVYNEGARHDVGKYGVLNFLVAGSDALAFSNLTDGE EECCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHEEECCCCEEECCCCCCH LTDLALKSLPAAFGDAREHFMEGKTHRWLSSVNCIPGGLPVRDVMTNHRPEPKNHPGFVV HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEE VGDYLFDSTLNGLLDSSDAATDIIVTETMKLRRARALAGQPGSDKIDASYFANYRNQGPY ECHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCH AEVWSRFTDPDYLLAMIRTVWDVPQGVKLLVAGSASGELVGALRERGIDAWGVDNNRGIL HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEE AKTPEALKPFNQFGSIVDLPFEDASFDLVFETSLCHVPENRVVKAIRELNRVTRTGLVFG ECCCHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEE SVTSDMEPIVIDDYDLLRGVKKLGTWWEWSELFFSNGFDLSMHRNDVSDKLWEATLKAGK CCCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCC GPGQWYGDADSLRYSFFDKVDDDEDDED CCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFDLAIVGGGPGGLMSAWYLKKKLGPLCRVTIFEASDRLGGKIVSRTFDTAPALYEAGVA CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHH ELYDYSMTGPDPLRELVQHFGLQTIPMDAEQVQLDGELLDDVPGMRRKYGDKTADAILAF HHHHCCCCCHHHHHHHHHHCCCEECCCCHHHHEECCHHHHCCCHHHHHCCCHHHHHHHHH RKTCSEMVTPLEYYEGVGAHDNEHPWAWTNCEQLLDKEIDDPVAKRFFKVMARSDIATES HHHHHHHHCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC HNTNGLNALKNFVMDIDGYIGLYSIQNGNEQLIEGLRSEVDAEIQLNHRILKVGKTASGR CCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCEEEEECCCCCCE YELNMMNGKGPETRDFDLVLMCLPHNWLATLGWGDEQLRKAMVKHVAYFDRPAHYLRISL EEEEEECCCCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEE LFDSPFWGDKIPGAWFMSEAFGGCCVYNEGARHDVGKYGVLNFLVAGSDALAFSNLTDGE EECCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHEEECCCCEEECCCCCCH LTDLALKSLPAAFGDAREHFMEGKTHRWLSSVNCIPGGLPVRDVMTNHRPEPKNHPGFVV HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEE VGDYLFDSTLNGLLDSSDAATDIIVTETMKLRRARALAGQPGSDKIDASYFANYRNQGPY ECHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCH AEVWSRFTDPDYLLAMIRTVWDVPQGVKLLVAGSASGELVGALRERGIDAWGVDNNRGIL HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEE AKTPEALKPFNQFGSIVDLPFEDASFDLVFETSLCHVPENRVVKAIRELNRVTRTGLVFG ECCCHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEE SVTSDMEPIVIDDYDLLRGVKKLGTWWEWSELFFSNGFDLSMHRNDVSDKLWEATLKAGK CCCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCC GPGQWYGDADSLRYSFFDKVDDDEDDED CCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA