| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is braF [H]
Identifier: 86749393
GI number: 86749393
Start: 2623768
End: 2624532
Strand: Direct
Name: braF [H]
Synonym: RPB_2273
Alternate gene names: 86749393
Gene position: 2623768-2624532 (Clockwise)
Preceding gene: 86749392
Following gene: 86749394
Centisome position: 49.21
GC content: 66.54
Gene sequence:
>765_bases ATGACCGCCTTGCTCGACGTGCAGCAATTGTCCAAATCGTTCGGCGGCCTGCGGGTCACCGACGACGTGTCGTTCACGCT GTCGAGCGGCGATCGCGTCGCGCTGATCGGCCCGAACGGCGCCGGCAAGACGACGCTGGTCAACCTGATCTCCGGCGATC TGCCGCCCTCCAGCGGGCGGATCCTGCTCGCCGGCGAGGACGTCACCGCCGCGTCGATCCCCGAGCGGGTGCAGGGCGGA CTGGTGCGGACGTTCCAGGTCACGCGGTTGTTCACCAGTCTGACGGTGGCCGAGAACGTCGCGCTCGCGGTGATGCAGCG TCGCGGGCTGACCAAGCGGATGTTCTCGTCGGTGATGGAGTCGGCGGAGGTGCGCGACGAATGGCAAGGCGTGCTGAGCC TGCTCGGCATCGCCCACCTCGCGGCCATGCCGGTGACCAAGCTGGCCTACGGTCAGCAGCGGCTGCTGGATCTGGCGATC GGGCTCGCGATGAAGCCACGGGTCCTGGTGCTCGATGAGCCTGCCGCCGGCGTGCCGCACGACGAGTCGCCGCGGATTCT CGAAGCCATCGCCAGGATGTCGCCGGAGATCGCGATCCTGATGATCGAGCACGACATGGATCTGGTGTTCAAATTCGCCA AACGCGTGCTGGTGCTGGCGAATGGCGCCCTGATTTTCGAGGGCACGCCGGCGGAAGTGAAGCAGAACGACGCCGTCCGT CAGGCCTATCTGGGAAGCTATGCCGATGCCCGCAGCACGTCTTGA
Upstream 100 bases:
>100_bases TCGGCCTGCTGCTGATCGTGGTGGTGCTGTTCTTCCCCAAGGGCCTCGTCAACGAGGTCGTGCGGCGGGTCGGCGAGTTT CGTCAGGCGAGGGGCGCGCG
Downstream 100 bases:
>100_bases AGTCGAGCGCCTGAGCGCCGGCTATGGTTCAGTCGGCATCCTGAGCGAGATGAGTCTGGTCGTGCCGGCCGGCGGCCGAT TGACCGTGCTCGGGCGCAAC
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTALLDVQQLSKSFGGLRVTDDVSFTLSSGDRVALIGPNGAGKTTLVNLISGDLPPSSGRILLAGEDVTAASIPERVQGG LVRTFQVTRLFTSLTVAENVALAVMQRRGLTKRMFSSVMESAEVRDEWQGVLSLLGIAHLAAMPVTKLAYGQQRLLDLAI GLAMKPRVLVLDEPAAGVPHDESPRILEAIARMSPEIAILMIEHDMDLVFKFAKRVLVLANGALIFEGTPAEVKQNDAVR QAYLGSYADARSTS
Sequences:
>Translated_254_residues MTALLDVQQLSKSFGGLRVTDDVSFTLSSGDRVALIGPNGAGKTTLVNLISGDLPPSSGRILLAGEDVTAASIPERVQGG LVRTFQVTRLFTSLTVAENVALAVMQRRGLTKRMFSSVMESAEVRDEWQGVLSLLGIAHLAAMPVTKLAYGQQRLLDLAI GLAMKPRVLVLDEPAAGVPHDESPRILEAIARMSPEIAILMIEHDMDLVFKFAKRVLVLANGALIFEGTPAEVKQNDAVR QAYLGSYADARSTS >Mature_253_residues TALLDVQQLSKSFGGLRVTDDVSFTLSSGDRVALIGPNGAGKTTLVNLISGDLPPSSGRILLAGEDVTAASIPERVQGGL VRTFQVTRLFTSLTVAENVALAVMQRRGLTKRMFSSVMESAEVRDEWQGVLSLLGIAHLAAMPVTKLAYGQQRLLDLAIG LAMKPRVLVLDEPAAGVPHDESPRILEAIARMSPEIAILMIEHDMDLVFKFAKRVLVLANGALIFEGTPAEVKQNDAVRQ AYLGSYADARSTS
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=231, Percent_Identity=30.3030303030303, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI116734710, Length=243, Percent_Identity=27.9835390946502, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI45446740, Length=229, Percent_Identity=28.82096069869, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI47078218, Length=229, Percent_Identity=28.82096069869, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI150417984, Length=237, Percent_Identity=29.535864978903, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI27881501, Length=236, Percent_Identity=26.271186440678, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI30795238, Length=236, Percent_Identity=26.271186440678, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI153792144, Length=231, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI21536376, Length=231, Percent_Identity=26.8398268398268, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27477115, Length=235, Percent_Identity=27.6595744680851, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31657092, Length=228, Percent_Identity=27.6315789473684, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=27.1889400921659, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=27.1889400921659, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI11967969, Length=228, Percent_Identity=25.4385964912281, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI27436953, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI6005701, Length=215, Percent_Identity=26.046511627907, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9955968, Length=217, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9955966, Length=217, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI45243524, Length=217, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI171184400, Length=229, Percent_Identity=27.9475982532751, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI156105685, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI11967971, Length=224, Percent_Identity=25, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=38.0952380952381, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1789593, Length=248, Percent_Identity=32.6612903225806, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87081791, Length=252, Percent_Identity=28.1746031746032, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI87081709, Length=239, Percent_Identity=29.2887029288703, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1788761, Length=238, Percent_Identity=30.2521008403361, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789991, Length=242, Percent_Identity=28.5123966942149, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082268, Length=244, Percent_Identity=29.0983606557377, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1788210, Length=245, Percent_Identity=26.1224489795918, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787370, Length=237, Percent_Identity=27.0042194092827, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI87081782, Length=238, Percent_Identity=29.8319327731092, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=26.5822784810127, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI48995001, Length=239, Percent_Identity=25.1046025104602, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=26.6949152542373, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=29.9539170506912, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=26.4705882352941, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786253, Length=226, Percent_Identity=30.9734513274336, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786563, Length=229, Percent_Identity=28.82096069869, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788165, Length=235, Percent_Identity=30.2127659574468, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790739, Length=241, Percent_Identity=28.6307053941909, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788472, Length=223, Percent_Identity=26.457399103139, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790544, Length=245, Percent_Identity=28.1632653061224, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788450, Length=251, Percent_Identity=26.6932270916335, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=25.7261410788382, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790190, Length=223, Percent_Identity=28.6995515695067, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=28.82096069869, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=30.5936073059361, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786803, Length=246, Percent_Identity=25.609756097561, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1789586, Length=257, Percent_Identity=28.7937743190661, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=26.3598326359833, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787712, Length=246, Percent_Identity=25.2032520325203, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786872, Length=241, Percent_Identity=27.3858921161826, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=28.2051282051282, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1790467, Length=249, Percent_Identity=26.9076305220884, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787089, Length=223, Percent_Identity=27.3542600896861, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789032, Length=232, Percent_Identity=25, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788644, Length=248, Percent_Identity=29.0322580645161, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786319, Length=181, Percent_Identity=31.4917127071823, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI87081834, Length=233, Percent_Identity=25.7510729613734, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786698, Length=221, Percent_Identity=26.2443438914027, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48994943, Length=256, Percent_Identity=24.21875, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790162, Length=258, Percent_Identity=24.8062015503876, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI2367384, Length=236, Percent_Identity=31.3559322033898, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787547, Length=244, Percent_Identity=24.5901639344262, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082267, Length=243, Percent_Identity=27.1604938271605, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI48994997, Length=232, Percent_Identity=25, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789891, Length=234, Percent_Identity=28.6324786324786, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786703, Length=233, Percent_Identity=28.755364806867, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788506, Length=268, Percent_Identity=26.865671641791, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787112, Length=226, Percent_Identity=29.2035398230088, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786981, Length=232, Percent_Identity=31.4655172413793, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787759, Length=254, Percent_Identity=26.7716535433071, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786654, Length=219, Percent_Identity=26.9406392694064, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789963, Length=248, Percent_Identity=26.2096774193548, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787500, Length=227, Percent_Identity=22.9074889867841, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71983516, Length=232, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71983510, Length=232, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71983523, Length=232, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=25.1063829787234, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=27.1493212669683, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17565586, Length=221, Percent_Identity=28.0542986425339, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=27.8538812785388, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17551702, Length=222, Percent_Identity=27.4774774774775, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17551700, Length=222, Percent_Identity=27.4774774774775, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209708, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115533608, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193202349, Length=225, Percent_Identity=23.5555555555556, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=25, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24666092, Length=241, Percent_Identity=31.5352697095436, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI28574150, Length=221, Percent_Identity=26.6968325791855, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI116007328, Length=221, Percent_Identity=26.6968325791855, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24643674, Length=233, Percent_Identity=24.4635193133047, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24648314, Length=231, Percent_Identity=25.1082251082251, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI221512771, Length=226, Percent_Identity=24.3362831858407, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI19920532, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580930, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571209, Length=211, Percent_Identity=24.1706161137441, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574533, Length=218, Percent_Identity=28.4403669724771, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24659289, Length=208, Percent_Identity=24.5192307692308, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27211; Mature: 27080
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3 ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALLDVQQLSKSFGGLRVTDDVSFTLSSGDRVALIGPNGAGKTTLVNLISGDLPPSSGR CCCCHHHHHHHHHHCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE ILLAGEDVTAASIPERVQGGLVRTFQVTRLFTSLTVAENVALAVMQRRGLTKRMFSSVME EEEECCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SAEVRDEWQGVLSLLGIAHLAAMPVTKLAYGQQRLLDLAIGLAMKPRVLVLDEPAAGVPH HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DESPRILEAIARMSPEIAILMIEHDMDLVFKFAKRVLVLANGALIFEGTPAEVKQNDAVR CCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHEECCEEEECCCCHHHHHHHHHH QAYLGSYADARSTS HHHHCCCCCCCCCC >Mature Secondary Structure TALLDVQQLSKSFGGLRVTDDVSFTLSSGDRVALIGPNGAGKTTLVNLISGDLPPSSGR CCCHHHHHHHHHHCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE ILLAGEDVTAASIPERVQGGLVRTFQVTRLFTSLTVAENVALAVMQRRGLTKRMFSSVME EEEECCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SAEVRDEWQGVLSLLGIAHLAAMPVTKLAYGQQRLLDLAIGLAMKPRVLVLDEPAAGVPH HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DESPRILEAIARMSPEIAILMIEHDMDLVFKFAKRVLVLANGALIFEGTPAEVKQNDAVR CCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHEECCEEEECCCCHHHHHHHHHH QAYLGSYADARSTS HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]