Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749348

Identifier: 86749348

GI number: 86749348

Start: 2541501

End: 2541989

Strand: Direct

Name: 86749348

Synonym: RPB_2228

Alternate gene names: NA

Gene position: 2541501-2541989 (Clockwise)

Preceding gene: 86749347

Following gene: 86749349

Centisome position: 47.67

GC content: 67.89

Gene sequence:

>489_bases
ATGATCGCTGGAGGACGGGCGATGCGGTTCGGCGGCGAATGGCGTTCCAGAGTGGCGCGATGGCTCGGCCGCCCGCTCGC
AGCGGCCGTCCGTTCGTCGGGATCTCCGGACGGGGTGATCGCCGTTCGCGAAGGATCGTCCGTCATTCCACCGGACTGGA
TCGAGTTCGCCTCCCTGCTACAAGAGCGGATCCAGCTCCGCCTGAACTCGGGCGATGCAGTCGCAACCCGGCTACAAACG
GCGATGTGGAGCCAAGCCAGCGAGACCGGCGCTCCGCCCACGATCGCGCTACGCGTCTGGGTCGGTCCCGGTGGCCGCGT
CGAGTGCGTCGAGGCTGAAGGGATGCAAGGCGACTTGGAAGGCGACTTGGATTGCAGGGGGCTGACGGTCGCGCTCGGAA
ACGATGGTGACGTCGCGCGGGTGCCGGCTGGCATGCCGCAGCCGCTGCGAATGCGCCTCCTCGTGAAGTCGGCGGAGACG
TCTCCGTGA

Upstream 100 bases:

>100_bases
ACGAACGCCAATGGCGGTGGCGCTGCCGCTTCGCCGGCGGTTGAGCCCGGCCCGTCGCCAGCGGCGACGATGCAGTAAGT
ATCAGCGACCGGCAGACGCG

Downstream 100 bases:

>100_bases
ATCGGGCTGAAAATCGACGCAAGCGATTGCGCATATACGGCGTCGCCGCAGCGGCGCTCGGCGTCCTGATCGTCGTTTCG
GCCCGCGCTGAGCCAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MIAGGRAMRFGGEWRSRVARWLGRPLAAAVRSSGSPDGVIAVREGSSVIPPDWIEFASLLQERIQLRLNSGDAVATRLQT
AMWSQASETGAPPTIALRVWVGPGGRVECVEAEGMQGDLEGDLDCRGLTVALGNDGDVARVPAGMPQPLRMRLLVKSAET
SP

Sequences:

>Translated_162_residues
MIAGGRAMRFGGEWRSRVARWLGRPLAAAVRSSGSPDGVIAVREGSSVIPPDWIEFASLLQERIQLRLNSGDAVATRLQT
AMWSQASETGAPPTIALRVWVGPGGRVECVEAEGMQGDLEGDLDCRGLTVALGNDGDVARVPAGMPQPLRMRLLVKSAET
SP
>Mature_162_residues
MIAGGRAMRFGGEWRSRVARWLGRPLAAAVRSSGSPDGVIAVREGSSVIPPDWIEFASLLQERIQLRLNSGDAVATRLQT
AMWSQASETGAPPTIALRVWVGPGGRVECVEAEGMQGDLEGDLDCRGLTVALGNDGDVARVPAGMPQPLRMRLLVKSAET
SP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17205; Mature: 17205

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGGRAMRFGGEWRSRVARWLGRPLAAAVRSSGSPDGVIAVREGSSVIPPDWIEFASLL
CCCCCCEEEECCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH
QERIQLRLNSGDAVATRLQTAMWSQASETGAPPTIALRVWVGPGGRVECVEAEGMQGDLE
HHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC
GDLDCRGLTVALGNDGDVARVPAGMPQPLRMRLLVKSAETSP
CCCCCCEEEEEECCCCCEEECCCCCCCHHHHHEEEECCCCCC
>Mature Secondary Structure
MIAGGRAMRFGGEWRSRVARWLGRPLAAAVRSSGSPDGVIAVREGSSVIPPDWIEFASLL
CCCCCCEEEECCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH
QERIQLRLNSGDAVATRLQTAMWSQASETGAPPTIALRVWVGPGGRVECVEAEGMQGDLE
HHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC
GDLDCRGLTVALGNDGDVARVPAGMPQPLRMRLLVKSAETSP
CCCCCCEEEEEECCCCCEEECCCCCCCHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA