| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is plp [H]
Identifier: 86749346
GI number: 86749346
Start: 2539853
End: 2540905
Strand: Direct
Name: plp [H]
Synonym: RPB_2226
Alternate gene names: 86749346
Gene position: 2539853-2540905 (Clockwise)
Preceding gene: 86749345
Following gene: 86749347
Centisome position: 47.64
GC content: 65.81
Gene sequence:
>1053_bases ATGAGTAACAGCATCGTCGATCGCATCCGACAGGCGGCACTTGTCGGCGTCGCGACGCTGGTCCCCTTGGTTGCGGTAGC CCAGACTGCGCCGAATCCGCCCGTGCAGAGAGCTCCGCAGGCTGCACCGCGGTCGGCCAAACAGGAACCGTCGGCGACTC AGGCGGCCGCGCCGACGGCGACGACGAGGCCCGCTCGGGCGGCCGAAAGAATCCCGGATACGCGAAAGGCCGACGACATC ATCGCGCGTGTCGGATCGACCAACATCTCCGCCGAGGAAATCCGCGGCTACGTCGCCGCCCTCGGCGAGCGCGATCTGGC GGCGCTGCGTCAGGATCCGAACCTGCTCAGCCAGGCGGTGCGGATGATGCTGGCCAATCGCCTGGTGATGCAGGAAATCG CCGCCAAGAAGTGGGATCAGCAGCCGAGTGTCGCCGAGAAGCTCGATCGGGTCCGCGAGAGCGCCGCGGTCGAATTGTAT CTGCAGACGGTGTCGACACCGCCGGAGAGGTTCCCGAGCGAAGACGATCTGCAGAGAGTCTACGACGCCAACCGCGCCGC GCTGCTGATGCCGCGCCAGTTCGAACTGGCGCAGATCTTCGTGGCGTTGCCGAAGGACGCCGACAAGGCCGCGGAGGACA AGGCGAAGAAGAGCGTCGAGGATATCCAACGCAAGTTGAAGGCGCCCGGCGTAGATTTCGCGGCGGTGGCGGCCGAGGCG GGCAACGCCAATGGCGGCGCGTTGGGCTGGGTGGCCGAGAGCCAGATCAGGCCGGAAATTCGCGCCAAGGTGATGGAACT GTCCAAGAACGCCGTGTCGGATCCGATCAAGCTCGATGACGGCTGGCACTTCGTCAAGGTGCTGGACACCAAGGCTCCCT ACACGCGGACCCTGCCGGAAGTTCGCGACGGGCTGATCGCTCAGATCCGGACAGAACGCGCCGCCGCTTTGCGCCGGGCG TATCTCGCCGAGTTGTTGAAGCAGCAGCCTCCGGTGATCAACGAACTCGCCTTGGCGGGAATGCTGAACGAGCGTAGCCC GGCGGCGCGCTAA
Upstream 100 bases:
>100_bases CAATTGTCGCGCAGGAGTCGGTGCTCGGATTCAGACGCGTGGAAATCCAGAACAGCATTCAAGAGACCGGCGATAAATTT CTCGATCAGAAGGTGAGCCC
Downstream 100 bases:
>100_bases TCGAAGTCCGGAGCCACCGGCCCGGCGCCGCCATGTCCGATTTGCAATTGGAGTATTCTCATGTCCGACACCCTCATCAG CAAGCTCGATCTTGATGGCT
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase plp; Rotamase plp [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSNSIVDRIRQAALVGVATLVPLVAVAQTAPNPPVQRAPQAAPRSAKQEPSATQAAAPTATTRPARAAERIPDTRKADDI IARVGSTNISAEEIRGYVAALGERDLAALRQDPNLLSQAVRMMLANRLVMQEIAAKKWDQQPSVAEKLDRVRESAAVELY LQTVSTPPERFPSEDDLQRVYDANRAALLMPRQFELAQIFVALPKDADKAAEDKAKKSVEDIQRKLKAPGVDFAAVAAEA GNANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDTKAPYTRTLPEVRDGLIAQIRTERAAALRRA YLAELLKQQPPVINELALAGMLNERSPAAR
Sequences:
>Translated_350_residues MSNSIVDRIRQAALVGVATLVPLVAVAQTAPNPPVQRAPQAAPRSAKQEPSATQAAAPTATTRPARAAERIPDTRKADDI IARVGSTNISAEEIRGYVAALGERDLAALRQDPNLLSQAVRMMLANRLVMQEIAAKKWDQQPSVAEKLDRVRESAAVELY LQTVSTPPERFPSEDDLQRVYDANRAALLMPRQFELAQIFVALPKDADKAAEDKAKKSVEDIQRKLKAPGVDFAAVAAEA GNANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDTKAPYTRTLPEVRDGLIAQIRTERAAALRRA YLAELLKQQPPVINELALAGMLNERSPAAR >Mature_349_residues SNSIVDRIRQAALVGVATLVPLVAVAQTAPNPPVQRAPQAAPRSAKQEPSATQAAAPTATTRPARAAERIPDTRKADDII ARVGSTNISAEEIRGYVAALGERDLAALRQDPNLLSQAVRMMLANRLVMQEIAAKKWDQQPSVAEKLDRVRESAAVELYL QTVSTPPERFPSEDDLQRVYDANRAALLMPRQFELAQIFVALPKDADKAAEDKAKKSVEDIQRKLKAPGVDFAAVAAEAG NANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDTKAPYTRTLPEVRDGLIAQIRTERAAALRRAY LAELLKQQPPVINELALAGMLNERSPAAR
Specific function: Ppiases Accelerate The Folding Of Proteins. Seems To Be Involved In The Folding Of Outer Membrane Proteins. Its Preference At The P1 Position Of The Peptide Substrate Is Glu > Leu > Ala > His > Val > Phe > Ile > Gly > Lys > Thr. [C]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 38045; Mature: 37914
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSIVDRIRQAALVGVATLVPLVAVAQTAPNPPVQRAPQAAPRSAKQEPSATQAAAPTA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCC TTRPARAAERIPDTRKADDIIARVGSTNISAEEIRGYVAALGERDLAALRQDPNLLSQAV CCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH RMMLANRLVMQEIAAKKWDQQPSVAEKLDRVRESAAVELYLQTVSTPPERFPSEDDLQRV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH YDANRAALLMPRQFELAQIFVALPKDADKAAEDKAKKSVEDIQRKLKAPGVDFAAVAAEA HCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC GNANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDTKAPYTRTLPE CCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCCCCHHCCHH VRDGLIAQIRTERAAALRRAYLAELLKQQPPVINELALAGMLNERSPAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNSIVDRIRQAALVGVATLVPLVAVAQTAPNPPVQRAPQAAPRSAKQEPSATQAAAPTA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCC TTRPARAAERIPDTRKADDIIARVGSTNISAEEIRGYVAALGERDLAALRQDPNLLSQAV CCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH RMMLANRLVMQEIAAKKWDQQPSVAEKLDRVRESAAVELYLQTVSTPPERFPSEDDLQRV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH YDANRAALLMPRQFELAQIFVALPKDADKAAEDKAKKSVEDIQRKLKAPGVDFAAVAAEA HCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC GNANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDTKAPYTRTLPE CCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCCCCHHCCHH VRDGLIAQIRTERAAALRRAYLAELLKQQPPVINELALAGMLNERSPAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA