| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is tolQ [H]
Identifier: 86749340
GI number: 86749340
Start: 2533695
End: 2535710
Strand: Direct
Name: tolQ [H]
Synonym: RPB_2220
Alternate gene names: 86749340
Gene position: 2533695-2535710 (Clockwise)
Preceding gene: 86749339
Following gene: 86749341
Centisome position: 47.52
GC content: 66.22
Gene sequence:
>2016_bases ATGACAATCGAGAAAGACGACGTGCGCGGCGCCGGACGGAGGTGGTCGCGAGGCACCAAGGCTTTGACCAAAGTCGGCTT GCTTGCTGCGCTCGCCGGCATGTTGCTGAGCGCGACGCCGGCGAACGCGTGGTGGAACGACGATTGGCAACTGCGCAAGA AGATCACGATCGATACCAGCGCCGCCGGCGCCAACATCACGGATCCAATCGGCACCACGCCGGTTCTGGTCCGTTTGCAC AGCGGCAACTTCCGCTTCAATACCACCAAGGAAGACGGCAGTGATCTGCGCTTCGTTGCCGGCGACGACAAGACTCCGCT GAAGTATCACGTCGAGAAATTCGACGCGCTGCTCGGCGAAGCGTTGGTCTGGGTCTCCGTTCCTGATCTGCAGCCGGGCG CCAAGACCGATTTGTGGCTGTACTACGGCAACAAGAAGGCGGCGGCGACCGCGGATTCGAAGGGCACCTACGACGCCGAC ACCCAGCTCGTCTATCACTTCAGCGAGCGCGGCACCGTGCCGCTCGACTCGACCGTCTGGGCCAACAACGCACAGAGCGT CGGCCAACCCGCCGAAGGAGCTATCATCGGCACGGGCTTGCGCCTCGACGGGCGTGCGCCGCTGACCCTGCCGTCATCGT CGGCGCTGGCGCTGGCCGGTAGCGGCGGCTGGACTTGGTCGGCCTGGGTAAAGCCGGCGTCGTCGCAGCCCAACACCGCT TTGTACAGCCGGCGCGACGGTGGCAACGCGGTGGTGATCGGTCTGGACAACGGCGCGCCGTTCGTCGAGGTCGCCAATGC GGGCGCAGTTCAGCGCACCGCGACGGCCGCGCCGGTCGCGCCCAACAGCTGGCATCATGTCGCTGTCGTCGCCGGCAATG GCCGGGTTACGCTGTATCTCGACGGCAACGCTTATGCCGTCCTCGACGCCGCTCTTCCGGCGCTCAACACCCTTGCTTTC GTCGGTGGGGACGCACTTGCCTCCAGCGCGCCTCCAACAGCGACGCCTGCCCAAACTTCGGTGCCGCTGGCCGACGAAAG CACTCCTCCGAGCGCGGCGACGGGCGATGCACCCGCGGCCGATGCCGCGGTGGCCGCCGCCCCGGCGGCGATGGCCGGGT TCACCGGAGATATCGACGAACTCGAAATCAGCAAGGTGTCTCGACCGGCCGGGTTCGTCCGTGTCGCGGCGATCGGCCAG GGGCTCGACAAGGGCAAGTTGCTGGCGTTCAGCGTCGACGAAGAGTCCGGCAGCTGGTTGTCGGGATATTTCGCCGTGAT CCTGAAATCGGTGACCCTCGACGGTTGGGTGGTGATCGCCATCCTGATGGTGATGGCGGTGATCAGCTGGATGGTGATGG TCGACCGTGCGTCGTATCTGCGGCGTCAGGCCCGGGCCAATGCGCGGTTCATGGCTTGCTACAATGCCGTCGATTTCGAC CTCCGGTTGCTGGGCTACGGCTCGCCGGAAGACGTGGCGACGCTCGGAGGGCGGCTCGACAACAAGGACGCAGCGCTGAT GCGGTCGTCGTCGTTGTACCGAATCTACCATATCGCCGCCGACGAGATCCGGCGTCGGTCGGGGCAGGGCGGCGTGCCGA CACTCTCCTCGAACTCGGTCGCGGCGATGCGGGCGGCGCTCGACGGCGGCGTGGTTCGTGAATCGCAGCGCCTCAACCGG TTGATGGTGATGCTGACCATCGCGATTTCCGGCGGTCCGTTCCTCGGTCTGCTCGGCACCGTGGTGGGCGTGATGATCAC CTTCGCGGCAATCGCCGCTTCCGGCGACGTCAACGTCAACGCCATCGCACCCGGCATCGCCGCCGCGCTGGTCGCCACCG TCGCCGGCCTCGGCGTCGCCATCCCCGCGCTGTTCGGCTACAACTACCTGATCTCCCAGATCAAGAACCTGACCGCCGAC GTCCAGGTGTTCGTCGACGACGTGGTGACGCGCATCGCCGAACTCTACACCTCAGACCTGCCGGCGCCGCTGCGCCGCGA TCAGGCGGCGGAGTAA
Upstream 100 bases:
>100_bases CGATTAACGGGGTCGTCGTGCTGTCGGTGCCGATGAAGGACCAAGCCTACACCCGCGCGGGTGATCCGCGCTTCAATTTC CGTGTTTGGGGCGAATTCTG
Downstream 100 bases:
>100_bases GGAGATGCAGGTCCAAGACGACTCCAAGCCGTACGACGACATCAACATCACGCCGATGTTGGACCTCGCCTACGTTCTGC TGGTGATCTTCATCATCATG
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MTIEKDDVRGAGRRWSRGTKALTKVGLLAALAGMLLSATPANAWWNDDWQLRKKITIDTSAAGANITDPIGTTPVLVRLH SGNFRFNTTKEDGSDLRFVAGDDKTPLKYHVEKFDALLGEALVWVSVPDLQPGAKTDLWLYYGNKKAAATADSKGTYDAD TQLVYHFSERGTVPLDSTVWANNAQSVGQPAEGAIIGTGLRLDGRAPLTLPSSSALALAGSGGWTWSAWVKPASSQPNTA LYSRRDGGNAVVIGLDNGAPFVEVANAGAVQRTATAAPVAPNSWHHVAVVAGNGRVTLYLDGNAYAVLDAALPALNTLAF VGGDALASSAPPTATPAQTSVPLADESTPPSAATGDAPAADAAVAAAPAAMAGFTGDIDELEISKVSRPAGFVRVAAIGQ GLDKGKLLAFSVDEESGSWLSGYFAVILKSVTLDGWVVIAILMVMAVISWMVMVDRASYLRRQARANARFMACYNAVDFD LRLLGYGSPEDVATLGGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGGVPTLSSNSVAAMRAALDGGVVRESQRLNR LMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVAGLGVAIPALFGYNYLISQIKNLTAD VQVFVDDVVTRIAELYTSDLPAPLRRDQAAE
Sequences:
>Translated_671_residues MTIEKDDVRGAGRRWSRGTKALTKVGLLAALAGMLLSATPANAWWNDDWQLRKKITIDTSAAGANITDPIGTTPVLVRLH SGNFRFNTTKEDGSDLRFVAGDDKTPLKYHVEKFDALLGEALVWVSVPDLQPGAKTDLWLYYGNKKAAATADSKGTYDAD TQLVYHFSERGTVPLDSTVWANNAQSVGQPAEGAIIGTGLRLDGRAPLTLPSSSALALAGSGGWTWSAWVKPASSQPNTA LYSRRDGGNAVVIGLDNGAPFVEVANAGAVQRTATAAPVAPNSWHHVAVVAGNGRVTLYLDGNAYAVLDAALPALNTLAF VGGDALASSAPPTATPAQTSVPLADESTPPSAATGDAPAADAAVAAAPAAMAGFTGDIDELEISKVSRPAGFVRVAAIGQ GLDKGKLLAFSVDEESGSWLSGYFAVILKSVTLDGWVVIAILMVMAVISWMVMVDRASYLRRQARANARFMACYNAVDFD LRLLGYGSPEDVATLGGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGGVPTLSSNSVAAMRAALDGGVVRESQRLNR LMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVAGLGVAIPALFGYNYLISQIKNLTAD VQVFVDDVVTRIAELYTSDLPAPLRRDQAAE >Mature_670_residues TIEKDDVRGAGRRWSRGTKALTKVGLLAALAGMLLSATPANAWWNDDWQLRKKITIDTSAAGANITDPIGTTPVLVRLHS GNFRFNTTKEDGSDLRFVAGDDKTPLKYHVEKFDALLGEALVWVSVPDLQPGAKTDLWLYYGNKKAAATADSKGTYDADT QLVYHFSERGTVPLDSTVWANNAQSVGQPAEGAIIGTGLRLDGRAPLTLPSSSALALAGSGGWTWSAWVKPASSQPNTAL YSRRDGGNAVVIGLDNGAPFVEVANAGAVQRTATAAPVAPNSWHHVAVVAGNGRVTLYLDGNAYAVLDAALPALNTLAFV GGDALASSAPPTATPAQTSVPLADESTPPSAATGDAPAADAAVAAAPAAMAGFTGDIDELEISKVSRPAGFVRVAAIGQG LDKGKLLAFSVDEESGSWLSGYFAVILKSVTLDGWVVIAILMVMAVISWMVMVDRASYLRRQARANARFMACYNAVDFDL RLLGYGSPEDVATLGGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGGVPTLSSNSVAAMRAALDGGVVRESQRLNRL MVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVAGLGVAIPALFGYNYLISQIKNLTADV QVFVDDVVTRIAELYTSDLPAPLRRDQAAE
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG5306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=106, Percent_Identity=36.7924528301887, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1789381, Length=88, Percent_Identity=43.1818181818182, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 70139; Mature: 70008
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEKDDVRGAGRRWSRGTKALTKVGLLAALAGMLLSATPANAWWNDDWQLRKKITIDTS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC AAGANITDPIGTTPVLVRLHSGNFRFNTTKEDGSDLRFVAGDDKTPLKYHVEKFDALLGE CCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC ALVWVSVPDLQPGAKTDLWLYYGNKKAAATADSKGTYDADTQLVYHFSERGTVPLDSTVW EEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEE ANNAQSVGQPAEGAIIGTGLRLDGRAPLTLPSSSALALAGSGGWTWSAWVKPASSQPNTA CCCCHHCCCCCCCCEEECCEEECCCCCEECCCCCCEEEECCCCCEEEEEECCCCCCCCCE LYSRRDGGNAVVIGLDNGAPFVEVANAGAVQRTATAAPVAPNSWHHVAVVAGNGRVTLYL EEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEE DGNAYAVLDAALPALNTLAFVGGDALASSAPPTATPAQTSVPLADESTPPSAATGDAPAA CCCEEEEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAAVAAAPAAMAGFTGDIDELEISKVSRPAGFVRVAAIGQGLDKGKLLAFSVDEESGSWL CHHHHHCCHHHHCCCCCCCHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEECCCCCCHH SGYFAVILKSVTLDGWVVIAILMVMAVISWMVMVDRASYLRRQARANARFMACYNAVDFD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE LRLLGYGSPEDVATLGGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGGVPTLSSNSV EEEEECCCCHHHHHHCCCCCCCCHHHHCCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCH AAMRAALDGGVVRESQRLNRLMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVN HHHHHHHCCCHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE AIAPGIAAALVATVAGLGVAIPALFGYNYLISQIKNLTADVQVFVDDVVTRIAELYTSDL EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC PAPLRRDQAAE CCCCCCCCCCC >Mature Secondary Structure TIEKDDVRGAGRRWSRGTKALTKVGLLAALAGMLLSATPANAWWNDDWQLRKKITIDTS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC AAGANITDPIGTTPVLVRLHSGNFRFNTTKEDGSDLRFVAGDDKTPLKYHVEKFDALLGE CCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC ALVWVSVPDLQPGAKTDLWLYYGNKKAAATADSKGTYDADTQLVYHFSERGTVPLDSTVW EEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEE ANNAQSVGQPAEGAIIGTGLRLDGRAPLTLPSSSALALAGSGGWTWSAWVKPASSQPNTA CCCCHHCCCCCCCCEEECCEEECCCCCEECCCCCCEEEECCCCCEEEEEECCCCCCCCCE LYSRRDGGNAVVIGLDNGAPFVEVANAGAVQRTATAAPVAPNSWHHVAVVAGNGRVTLYL EEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEE DGNAYAVLDAALPALNTLAFVGGDALASSAPPTATPAQTSVPLADESTPPSAATGDAPAA CCCEEEEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAAVAAAPAAMAGFTGDIDELEISKVSRPAGFVRVAAIGQGLDKGKLLAFSVDEESGSWL CHHHHHCCHHHHCCCCCCCHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEECCCCCCHH SGYFAVILKSVTLDGWVVIAILMVMAVISWMVMVDRASYLRRQARANARFMACYNAVDFD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE LRLLGYGSPEDVATLGGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGGVPTLSSNSV EEEEECCCCHHHHHHCCCCCCCCHHHHCCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCH AAMRAALDGGVVRESQRLNRLMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVN HHHHHHHCCCHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE AIAPGIAAALVATVAGLGVAIPALFGYNYLISQIKNLTADVQVFVDDVVTRIAELYTSDL EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC PAPLRRDQAAE CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 8921895 [H]