Click here to switch to the map view.

The map label for this gene is 86749335

Identifier: 86749335

GI number: 86749335

Start: 2528433

End: 2529122

Strand: Direct

Name: 86749335

Synonym: RPB_2215

Alternate gene names: NA

Gene position: 2528433-2529122 (Clockwise)

Preceding gene: 86749334

Following gene: 86749336

Centisome position: 47.42

GC content: 66.09

Gene sequence:

>690_bases
TTGCCGGTCGGCCGACTGATCGCTGCGATGGCGTTGATGCTGAGTGTGGCCGTGGCGACCGGCGAAGAAGCTGCAAGTCC
CGCCGGCCCGATGACGTTCCGGATTCCAGCCCAACCGCTGATCGGAGCGCTGCAAGCTTTCAGTCAACAGAGCGGCGTGC
AGGTGATGTTCGAGACCGCGGCCGCGGCCGGCTTCAACGCGCCTTCGGTCGAAGGCGAGTTTACGCCGGATATGGCACTG
CGGTTGTTGCTGGCGGACACCGATCTCAAGATCCGCTACAGCCGGTCGCGCGCCATCACGCTGGCGCCGGTCACCGCCCC
AGATCCCGATCTGCCGCCACCGCTTTCGCTCGGCGCCACCGATTTGGCACTCGAGACCTTGCATGTCGGCGGCCGCGACG
CCGCCGACGCCAACCGGCTGGGCGAATACGTCGCGTCGGTTCAGTCCGACATCCAGAAGGCGATGAGACGGGTCAACCGG
GCCCAAGGCGGCGAATACCGATTTGCGGTTCGATTGTGGGTCGATCCAGCGTCGCGCGCTATCGCTCGCGCCGAACTCGA
CGGCTCGACCGGCGACCCCGCCCGAGATGCCAGGATCGCCGATCTGCTGCACACCATGACGCTGAGCCGTCAACCGCCGC
CGAACGTGCCGCGGCCGATCCGGTTCTTGGTTTCGATCAAAACGCTGTAG

Upstream 100 bases:

>100_bases
GGGGCCGGGGCTGGCGCCGAGGCGACATGGCTGCGGAGCGACGTAGAGTGAGGCCAGTTTGACGAGTGTCAGTGTAGGGT
TAATGGGGCGATCGAGCTGG

Downstream 100 bases:

>100_bases
TCACGAAGGTCGACGATCGCCATGTGGGACAGTCCAAACCGTGCCGCGCCGCCGTCCAGTGCGGCCCCCGATTGGCGCGC
GACTGCGACCGGGCTCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Secretin/nB Short-Like Protein; Secretin/nB-Like Protein; Secretin/nB Short-Like; NB Family Protein

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPVGRLIAAMALMLSVAVATGEEAASPAGPMTFRIPAQPLIGALQAFSQQSGVQVMFETAAAAGFNAPSVEGEFTPDMAL
RLLLADTDLKIRYSRSRAITLAPVTAPDPDLPPPLSLGATDLALETLHVGGRDAADANRLGEYVASVQSDIQKAMRRVNR
AQGGEYRFAVRLWVDPASRAIARAELDGSTGDPARDARIADLLHTMTLSRQPPPNVPRPIRFLVSIKTL

Sequences:

>Translated_229_residues
MPVGRLIAAMALMLSVAVATGEEAASPAGPMTFRIPAQPLIGALQAFSQQSGVQVMFETAAAAGFNAPSVEGEFTPDMAL
RLLLADTDLKIRYSRSRAITLAPVTAPDPDLPPPLSLGATDLALETLHVGGRDAADANRLGEYVASVQSDIQKAMRRVNR
AQGGEYRFAVRLWVDPASRAIARAELDGSTGDPARDARIADLLHTMTLSRQPPPNVPRPIRFLVSIKTL
>Mature_228_residues
PVGRLIAAMALMLSVAVATGEEAASPAGPMTFRIPAQPLIGALQAFSQQSGVQVMFETAAAAGFNAPSVEGEFTPDMALR
LLLADTDLKIRYSRSRAITLAPVTAPDPDLPPPLSLGATDLALETLHVGGRDAADANRLGEYVASVQSDIQKAMRRVNRA
QGGEYRFAVRLWVDPASRAIARAELDGSTGDPARDARIADLLHTMTLSRQPPPNVPRPIRFLVSIKTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24348; Mature: 24217

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGRLIAAMALMLSVAVATGEEAASPAGPMTFRIPAQPLIGALQAFSQQSGVQVMFETA
CCHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEHH
AAAGFNAPSVEGEFTPDMALRLLLADTDLKIRYSRSRAITLAPVTAPDPDLPPPLSLGAT
HHCCCCCCCCCCCCCHHHHHEEHEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCH
DLALETLHVGGRDAADANRLGEYVASVQSDIQKAMRRVNRAQGGEYRFAVRLWVDPASRA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHH
IARAELDGSTGDPARDARIADLLHTMTLSRQPPPNVPRPIRFLVSIKTL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEECC
>Mature Secondary Structure 
PVGRLIAAMALMLSVAVATGEEAASPAGPMTFRIPAQPLIGALQAFSQQSGVQVMFETA
CHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEHH
AAAGFNAPSVEGEFTPDMALRLLLADTDLKIRYSRSRAITLAPVTAPDPDLPPPLSLGAT
HHCCCCCCCCCCCCCHHHHHEEHEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCH
DLALETLHVGGRDAADANRLGEYVASVQSDIQKAMRRVNRAQGGEYRFAVRLWVDPASRA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHH
IARAELDGSTGDPARDARIADLLHTMTLSRQPPPNVPRPIRFLVSIKTL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA