| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749330
Identifier: 86749330
GI number: 86749330
Start: 2512793
End: 2513299
Strand: Direct
Name: 86749330
Synonym: RPB_2210
Alternate gene names: NA
Gene position: 2512793-2513299 (Clockwise)
Preceding gene: 86749329
Following gene: 86749331
Centisome position: 47.13
GC content: 63.71
Gene sequence:
>507_bases TTGAGCGGCGATGTTCGGGCGTCGGATTCGGCCGACCGGGGAGACATAGAAGTGGCGGTGTTCGCGATCAATCGGCTGGG TGTGCGAAGTTGCGTCCTCGCCCTGTGCCTGTTTTCAGTCTGCGCGGGTGGCATGAAGACGGCTGCAGCACAGTCGATGG ATTATCGCAGCCCGGCTGCGGCGCCGCCGTCGTGGACACAGTTCGCCAAGCTGGTCCAGTACCGTTTCGAATCCTGGATC AGCGACGACGAGGAGATCGCCAATCGGTTTCGCGCCCATGTCGTCGAGCGGGCAGGGAAGCCCGGCGGGCTCCCGCCGAC GCTGGTGGTGCGGGCCTGGCTCAATCCCGACGGCACTGTCGAGAAGATCGCGTTTCCGGCTCTGAACGATGCGCGGGCCG AAGCCGATTTGCGGACCATCCTGATGCGCGGCAATGTCGGCGAACCCCCGCCGCCCGAGATGCTGCAGCCGTTGAACCTG CAATTCTCGCTCAATCTGAAGAAGTAA
Upstream 100 bases:
>100_bases GCGTCAGGCCGTCCGAGGACGACCGGCCTCAAATTGCCGGGGGCGGCTCGCGCGCCCATCGCGCGGCATCGATTTCCGCG CGGGTCACATGCCTGCAAAA
Downstream 100 bases:
>100_bases GCGAGGCGACCGGCGCAGGCCCATGCGCCCCGCGGCAGAGATGGGGCGGCTCCGAAGGTGCTCCACCCAAGCGCGAGCAG GCGCGCTTCGCGGGGTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSGDVRASDSADRGDIEVAVFAINRLGVRSCVLALCLFSVCAGGMKTAAAQSMDYRSPAAAPPSWTQFAKLVQYRFESWI SDDEEIANRFRAHVVERAGKPGGLPPTLVVRAWLNPDGTVEKIAFPALNDARAEADLRTILMRGNVGEPPPPEMLQPLNL QFSLNLKK
Sequences:
>Translated_168_residues MSGDVRASDSADRGDIEVAVFAINRLGVRSCVLALCLFSVCAGGMKTAAAQSMDYRSPAAAPPSWTQFAKLVQYRFESWI SDDEEIANRFRAHVVERAGKPGGLPPTLVVRAWLNPDGTVEKIAFPALNDARAEADLRTILMRGNVGEPPPPEMLQPLNL QFSLNLKK >Mature_167_residues SGDVRASDSADRGDIEVAVFAINRLGVRSCVLALCLFSVCAGGMKTAAAQSMDYRSPAAAPPSWTQFAKLVQYRFESWIS DDEEIANRFRAHVVERAGKPGGLPPTLVVRAWLNPDGTVEKIAFPALNDARAEADLRTILMRGNVGEPPPPEMLQPLNLQ FSLNLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18283; Mature: 18152
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDVRASDSADRGDIEVAVFAINRLGVRSCVLALCLFSVCAGGMKTAAAQSMDYRSPAA CCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC APPSWTQFAKLVQYRFESWISDDEEIANRFRAHVVERAGKPGGLPPTLVVRAWLNPDGTV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCCCC EKIAFPALNDARAEADLRTILMRGNVGEPPPPEMLQPLNLQFSLNLKK HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECC >Mature Secondary Structure SGDVRASDSADRGDIEVAVFAINRLGVRSCVLALCLFSVCAGGMKTAAAQSMDYRSPAA CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC APPSWTQFAKLVQYRFESWISDDEEIANRFRAHVVERAGKPGGLPPTLVVRAWLNPDGTV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCCCC EKIAFPALNDARAEADLRTILMRGNVGEPPPPEMLQPLNLQFSLNLKK HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA