Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749298

Identifier: 86749298

GI number: 86749298

Start: 2470867

End: 2472105

Strand: Direct

Name: 86749298

Synonym: RPB_2177

Alternate gene names: NA

Gene position: 2470867-2472105 (Clockwise)

Preceding gene: 86749294

Following gene: 86749301

Centisome position: 46.34

GC content: 64.25

Gene sequence:

>1239_bases
ATGACGACGATGACGATGACGACGAAGAAGATGACAGCCCTGGTTCGGATCGGTGTCGTGTTGGCGGGCGCAGCGCTCGC
CGCGTCTCCCGTCGCGGCGCAACAGCCGTCGCGCGAACCTGTGCAGGTCGCCTCCGGCGTCTCCTATCAATATCTCGATC
GCTGGGACGTCGATCGCCTCAACAAGATCCTGACCACCGACACGCCGAAATTCGCCGGCATCAAGGTGACCTACACGCCC
GCCACCAACGCGGTGAAACTGTATCGCGTGACCTATTCGTCGGTAGTGCCCGAGCGCGGCAACAAGCCGATCGTCGCCAC
CGGACTGATCGCGGTGCCCGATACCAAGACGACGTCGTTTCCGATGGTCTCCTATCAGCACGGCACGGTGTACGGAAAGC
AGGAGGTGCCGTCGTTCCCGGAGCAGTCGCCCGAGACCCAGCTGATGATCGCGCAATTCGCCGGGCAGGGCTATCTCGTG
ATCGGCGCCGACTACTTCGGCATGGGCAGCTCGACCGAGCCGGAAGGCTACATGGTCAAGGGCAGCCATCAGCAGGCGAC
CTACGACATGGTCGTCGCCAGCCGCGCCGTGCTCGCCGATCTCAAGCTCGCCGACACCAAGCTGTTCCTCAGCGGCTGGT
CGCAGGGCGGCTTCGTCACCCTGGCGATGCTGGAGAAGCTTGAAGCCGCCGGCATGAAGGTGAATGCGGCGGCCACCGCC
AGCGCGCCGGCCGACGCTTTCGCCGCGTTCGAGGGCTTCCTCGACTTTCCGCGCAAGATCGACGCGAGCTGGATTCCGAC
GATCTTCATCCTGACCGCGTTCTCGTTCGAGAACTACTACGGCGTGCCGGGTCTCGCCCGCTCGCTGCTGACCGAGGACA
CGTATGAGAACGCGCGCAAGGCCTATCTGCGCGAGCCGTTCGACCAGGCCGCGATCCCGACCGATCTGAAGAAGCTGATC
CGGCCGGAATATTTCGACACGCACTACTTCGCCAATTCGGCCTATGGCCGCATCGTCGCGCAGACGCAGTCCTATCGCTG
GGTGGTGAAGACCCCGGTGCGCACCTATTACGGCCTGACCGACGAGGCGATCCGCACCGAGCTCGGGCAACTGCCGATGA
CCTGGCAGAAGGCGATGGGCAACGACAAGATCGAGGCGGTGCCGACCGGCGACACCAGCCATCGCGGCACCTTCGCCACC
GCCGTGCCGCAATGGAAGGCGTGGTTCGACGGCAAGTAA

Upstream 100 bases:

>100_bases
CAGCAAACAAGGTCGGCGGCGCATCGACGGAACTCAATCTTTACCGTCGATTGCTACACAGCCGCGCGCAACGCGAACGT
CTCGGTGACACATGACGAAG

Downstream 100 bases:

>100_bases
CCGCCGGCGCGGCGACACCGGACGCTACACCGCGCCGACCGCAAGCAGCGCGCCGGCGAGCGCGCTGCCCGCCACCACGA
CCAGCGGCGGCGCGCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTTMTMTTKKMTALVRIGVVLAGAALAASPVAAQQPSREPVQVASGVSYQYLDRWDVDRLNKILTTDTPKFAGIKVTYTP
ATNAVKLYRVTYSSVVPERGNKPIVATGLIAVPDTKTTSFPMVSYQHGTVYGKQEVPSFPEQSPETQLMIAQFAGQGYLV
IGADYFGMGSSTEPEGYMVKGSHQQATYDMVVASRAVLADLKLADTKLFLSGWSQGGFVTLAMLEKLEAAGMKVNAAATA
SAPADAFAAFEGFLDFPRKIDASWIPTIFILTAFSFENYYGVPGLARSLLTEDTYENARKAYLREPFDQAAIPTDLKKLI
RPEYFDTHYFANSAYGRIVAQTQSYRWVVKTPVRTYYGLTDEAIRTELGQLPMTWQKAMGNDKIEAVPTGDTSHRGTFAT
AVPQWKAWFDGK

Sequences:

>Translated_412_residues
MTTMTMTTKKMTALVRIGVVLAGAALAASPVAAQQPSREPVQVASGVSYQYLDRWDVDRLNKILTTDTPKFAGIKVTYTP
ATNAVKLYRVTYSSVVPERGNKPIVATGLIAVPDTKTTSFPMVSYQHGTVYGKQEVPSFPEQSPETQLMIAQFAGQGYLV
IGADYFGMGSSTEPEGYMVKGSHQQATYDMVVASRAVLADLKLADTKLFLSGWSQGGFVTLAMLEKLEAAGMKVNAAATA
SAPADAFAAFEGFLDFPRKIDASWIPTIFILTAFSFENYYGVPGLARSLLTEDTYENARKAYLREPFDQAAIPTDLKKLI
RPEYFDTHYFANSAYGRIVAQTQSYRWVVKTPVRTYYGLTDEAIRTELGQLPMTWQKAMGNDKIEAVPTGDTSHRGTFAT
AVPQWKAWFDGK
>Mature_411_residues
TTMTMTTKKMTALVRIGVVLAGAALAASPVAAQQPSREPVQVASGVSYQYLDRWDVDRLNKILTTDTPKFAGIKVTYTPA
TNAVKLYRVTYSSVVPERGNKPIVATGLIAVPDTKTTSFPMVSYQHGTVYGKQEVPSFPEQSPETQLMIAQFAGQGYLVI
GADYFGMGSSTEPEGYMVKGSHQQATYDMVVASRAVLADLKLADTKLFLSGWSQGGFVTLAMLEKLEAAGMKVNAAATAS
APADAFAAFEGFLDFPRKIDASWIPTIFILTAFSFENYYGVPGLARSLLTEDTYENARKAYLREPFDQAAIPTDLKKLIR
PEYFDTHYFANSAYGRIVAQTQSYRWVVKTPVRTYYGLTDEAIRTELGQLPMTWQKAMGNDKIEAVPTGDTSHRGTFATA
VPQWKAWFDGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45226; Mature: 45095

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00120 LIPASE_SER ; PS00708 PRO_ENDOPEP_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMTMTTKKMTALVRIGVVLAGAALAASPVAAQQPSREPVQVASGVSYQYLDRWDVDRL
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEHHCCCCHHHH
NKILTTDTPKFAGIKVTYTPATNAVKLYRVTYSSVVPERGNKPIVATGLIAVPDTKTTSF
HHHHCCCCCCCCEEEEEECCCCCCEEEEEEEHHHHCCCCCCCCEEEEEEEECCCCCCCCC
PMVSYQHGTVYGKQEVPSFPEQSPETQLMIAQFAGQGYLVIGADYFGMGSSTEPEGYMVK
CEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEECCCCCCCCCCEEEE
GSHQQATYDMVVASRAVLADLKLADTKLFLSGWSQGGFVTLAMLEKLEAAGMKVNAAATA
CCCCCHHHHHHHHHHHHHHHCCHHCEEEEEECCCCCCEEHHHHHHHHHHCCEEEEECCCC
SAPADAFAAFEGFLDFPRKIDASWIPTIFILTAFSFENYYGVPGLARSLLTEDTYENARK
CCCHHHHHHHHHHHHCCHHCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AYLREPFDQAAIPTDLKKLIRPEYFDTHYFANSAYGRIVAQTQSYRWVVKTPVRTYYGLT
HHHHCCHHHCCCCHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCEEEEECCHHHHCCCC
DEAIRTELGQLPMTWQKAMGNDKIEAVPTGDTSHRGTFATAVPQWKAWFDGK
HHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TTMTMTTKKMTALVRIGVVLAGAALAASPVAAQQPSREPVQVASGVSYQYLDRWDVDRL
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEHHCCCCHHHH
NKILTTDTPKFAGIKVTYTPATNAVKLYRVTYSSVVPERGNKPIVATGLIAVPDTKTTSF
HHHHCCCCCCCCEEEEEECCCCCCEEEEEEEHHHHCCCCCCCCEEEEEEEECCCCCCCCC
PMVSYQHGTVYGKQEVPSFPEQSPETQLMIAQFAGQGYLVIGADYFGMGSSTEPEGYMVK
CEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEECCCCCCCCCCEEEE
GSHQQATYDMVVASRAVLADLKLADTKLFLSGWSQGGFVTLAMLEKLEAAGMKVNAAATA
CCCCCHHHHHHHHHHHHHHHCCHHCEEEEEECCCCCCEEHHHHHHHHHHCCEEEEECCCC
SAPADAFAAFEGFLDFPRKIDASWIPTIFILTAFSFENYYGVPGLARSLLTEDTYENARK
CCCHHHHHHHHHHHHCCHHCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AYLREPFDQAAIPTDLKKLIRPEYFDTHYFANSAYGRIVAQTQSYRWVVKTPVRTYYGLT
HHHHCCHHHCCCCHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCEEEEECCHHHHCCCC
DEAIRTELGQLPMTWQKAMGNDKIEAVPTGDTSHRGTFATAVPQWKAWFDGK
HHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA