| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749271
Identifier: 86749271
GI number: 86749271
Start: 2440566
End: 2441342
Strand: Direct
Name: 86749271
Synonym: RPB_2150
Alternate gene names: NA
Gene position: 2440566-2441342 (Clockwise)
Preceding gene: 86749270
Following gene: 86749273
Centisome position: 45.78
GC content: 67.7
Gene sequence:
>777_bases ATGGTGACAAGTCTCCAATCACCGAACGATCTGCTGGCCGCGCTGCCGTCGGCGCAGTTCAATCTGCTGCGGCCGTATCT GCGCACGATGGTGCTGGATTTCGGTCAGGTGCTGATCGAGGCCGGCGCTCCGGTCAGGCAAGTGATCTTTCCTCACAGTG GCATCGTGTCGACGCTGGCCCGGCTGCAGCGCGGCGAGACCATCGAAGTCGGCGTGGTCGGGCGCGACGGCGTGGTCGGC GCAACCAGTGCGCTGTTCGGCGTGCCGTCGTCGTGCGCGGCGGTCGTGCGATTTTCCGGCGCGGCCTCGGCGATCGACGC CAGCCATTTTCGCGCCGTCGCCGAACTCAGCCCCGCATTGCGCGAGGCGTTGTTGCGCGATCAGTCGAGCCGCACGATCA AGGCCGAGCAGACCGCGGCCTGCAATGCCGCGCACACCGCGGAGGCGCGGTTGTGTCGGCGGCTGTTGCAGTCCCGCGAG ATGGCCGGCAGCGACTGCATGCTGCTCAGTCAGGATCTGATGGCGCAGATGCTCGGCGTGAAGCGCAACACCATCTCGCT GATCGCGCATGGGCTGCAGCAGCAGGGTCTGATCCGTTACAGCCGCGGCCGGATGGCGATCCTCGATGTCGAGGGGTTGA TCCGACGCTCGTGCGAATGCCGAAGCGCGGACCGGGTGCCGGTCGCGGTCCTGCCGCTCCGGAGCAGCGCGACGGTGGTG ATGCAGCGGCCCGCACCCGGGTCCGAATTCGGCCAGGCTCAGCGCAGCCCTTCATAG
Upstream 100 bases:
>100_bases CAGGCTTGCTCCCCCCGAACGGGACGGCGCGGAACTTGGGAACTCATCGGCCGGACCGTGTGATCGAGCGCGGCGTCTCG GCCTTGCCGGGGCGGCTGTG
Downstream 100 bases:
>100_bases ACGATCAGCCCGCGCGCCACTTCCCATTTGCGCAGCACCCGCGGCCGCAGCCGGCGGGACTGCCGGCCGAGCGTGCGCCA GGTGGTCAACCGCAGCGCGC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; GntR Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MVTSLQSPNDLLAALPSAQFNLLRPYLRTMVLDFGQVLIEAGAPVRQVIFPHSGIVSTLARLQRGETIEVGVVGRDGVVG ATSALFGVPSSCAAVVRFSGAASAIDASHFRAVAELSPALREALLRDQSSRTIKAEQTAACNAAHTAEARLCRRLLQSRE MAGSDCMLLSQDLMAQMLGVKRNTISLIAHGLQQQGLIRYSRGRMAILDVEGLIRRSCECRSADRVPVAVLPLRSSATVV MQRPAPGSEFGQAQRSPS
Sequences:
>Translated_258_residues MVTSLQSPNDLLAALPSAQFNLLRPYLRTMVLDFGQVLIEAGAPVRQVIFPHSGIVSTLARLQRGETIEVGVVGRDGVVG ATSALFGVPSSCAAVVRFSGAASAIDASHFRAVAELSPALREALLRDQSSRTIKAEQTAACNAAHTAEARLCRRLLQSRE MAGSDCMLLSQDLMAQMLGVKRNTISLIAHGLQQQGLIRYSRGRMAILDVEGLIRRSCECRSADRVPVAVLPLRSSATVV MQRPAPGSEFGQAQRSPS >Mature_258_residues MVTSLQSPNDLLAALPSAQFNLLRPYLRTMVLDFGQVLIEAGAPVRQVIFPHSGIVSTLARLQRGETIEVGVVGRDGVVG ATSALFGVPSSCAAVVRFSGAASAIDASHFRAVAELSPALREALLRDQSSRTIKAEQTAACNAAHTAEARLCRRLLQSRE MAGSDCMLLSQDLMAQMLGVKRNTISLIAHGLQQQGLIRYSRGRMAILDVEGLIRRSCECRSADRVPVAVLPLRSSATVV MQRPAPGSEFGQAQRSPS
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27576; Mature: 27576
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSLQSPNDLLAALPSAQFNLLRPYLRTMVLDFGQVLIEAGAPVRQVIFPHSGIVSTLA CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH RLQRGETIEVGVVGRDGVVGATSALFGVPSSCAAVVRFSGAASAIDASHFRAVAELSPAL HHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH REALLRDQSSRTIKAEQTAACNAAHTAEARLCRRLLQSREMAGSDCMLLSQDLMAQMLGV HHHHHHCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC KRNTISLIAHGLQQQGLIRYSRGRMAILDVEGLIRRSCECRSADRVPVAVLPLRSSATVV CHHHHHHHHHHHHHCCCEEECCCCEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCEEE MQRPAPGSEFGQAQRSPS EECCCCCHHHHCCCCCCC >Mature Secondary Structure MVTSLQSPNDLLAALPSAQFNLLRPYLRTMVLDFGQVLIEAGAPVRQVIFPHSGIVSTLA CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH RLQRGETIEVGVVGRDGVVGATSALFGVPSSCAAVVRFSGAASAIDASHFRAVAELSPAL HHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH REALLRDQSSRTIKAEQTAACNAAHTAEARLCRRLLQSREMAGSDCMLLSQDLMAQMLGV HHHHHHCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC KRNTISLIAHGLQQQGLIRYSRGRMAILDVEGLIRRSCECRSADRVPVAVLPLRSSATVV CHHHHHHHHHHHHHCCCEEECCCCEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCEEE MQRPAPGSEFGQAQRSPS EECCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA