| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749270
Identifier: 86749270
GI number: 86749270
Start: 2440197
End: 2440418
Strand: Direct
Name: 86749270
Synonym: RPB_2149
Alternate gene names: NA
Gene position: 2440197-2440418 (Clockwise)
Preceding gene: 86749266
Following gene: 86749271
Centisome position: 45.77
GC content: 66.67
Gene sequence:
>222_bases ATGGCACACAGCGACGACAGCGGATCCTCGCGCGCCGACCTCGCCAAGCAGGTCGATGCCGAAGAAGAAATGCGCGTACT CACCGCTCTGATCGGCTGCATCATGGTCGCCGAGGATGCCGGTGGTCGAGATGATGGCCGAACCTCGCTGCGGCATCTGA CGCCGCCGATGGCGTCGCGCGGCCTCGGTTCTCCGGTCAAGCGCGCTCGCGCGGCATCGTGA
Upstream 100 bases:
>100_bases GCGATGCCGCGTCGCCGGTTCGGATTTTTTTTCGACTTGAGCCAGATCAACGCTGCCATTGGCTCGTTCGATATTGCACA CTCGAATTAGGAGAGTCCTC
Downstream 100 bases:
>100_bases GTAGTCGTACGAACTGGACTTTACCGCTCAACGGCTCGAAGAGTTGTCAGGCTTGCTCCCCCCGAACGGGACGGCGCGGA ACTTGGGAACTCATCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MAHSDDSGSSRADLAKQVDAEEEMRVLTALIGCIMVAEDAGGRDDGRTSLRHLTPPMASRGLGSPVKRARAAS
Sequences:
>Translated_73_residues MAHSDDSGSSRADLAKQVDAEEEMRVLTALIGCIMVAEDAGGRDDGRTSLRHLTPPMASRGLGSPVKRARAAS >Mature_72_residues AHSDDSGSSRADLAKQVDAEEEMRVLTALIGCIMVAEDAGGRDDGRTSLRHLTPPMASRGLGSPVKRARAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7651; Mature: 7519
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSDDSGSSRADLAKQVDAEEEMRVLTALIGCIMVAEDAGGRDDGRTSLRHLTPPMASR CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHC GLGSPVKRARAAS CCCCHHHHHCCCC >Mature Secondary Structure AHSDDSGSSRADLAKQVDAEEEMRVLTALIGCIMVAEDAGGRDDGRTSLRHLTPPMASR CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHC GLGSPVKRARAAS CCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA