Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 86749266

GI number: 86749266

Start: 2434591

End: 2435415

Strand: Direct

Name: omp31 [H]

Synonym: RPB_2145

Alternate gene names: 86749266

Gene position: 2434591-2435415 (Clockwise)

Preceding gene: 86749265

Following gene: 86749270

Centisome position: 45.66

GC content: 63.27

Gene sequence:

>825_bases
TTGGGCCGAAATGAGCTAGTGTTTTCTCGAGATGGAATCACTCGACCCTTGGTTCTGATGGAGGAGGAATTGGCATTGAA
GACGTTTCTGTTCGGTACGGCGGCGGCACTCGTGATGATGAGTTCAGCCTCGGCGGCTGATCTGGCGGCCCGGCCCTACA
CCAAGGCGGCACCGATCGTGGCCCCGGTGTTGACCTGGAACGGCTTCTATATCGGCGGTCAGGGCGGCTATGGCTGGGGC
TCGAGCGACGAGACCGTCTTCGCCGCCGCCAACACCCCGGCGTTCTTCGGCTCCCAGAAGTACGACACCAGCGGCGGCTT
CGCCGGCGGCGTGGTCGGCTACAACTGGCAGAGCGGCGCCGTCGTGTTCGGTCTCGAAGGCGATTACCACTGGGCGGACA
TCAACGGCACGTCGTCCGTGATCAATGTCGGCCCGCCGAATCTCGGCGACACCTATTCCACCAAGCTGCGCGGCTTCGGC
GACATCAAGGGCCGTCTCGGCTATGCGGCCGGTCCGGCGCTGTGGTTCGTCAGCGGCGGTGCCGCGGTCGGCGACCTCCA
GCACCGCTATGACGGTGGCGCTGCCAACACATTCGTGCAGAACAAGACCAAATGGGGCTACACGGTCGGTGCCGGCGTCG
AATACATGTTCGCGCCGAGCTGGTCGGCCAAGCTCGAATACAACTACATCGATCTCGGCCGCAGCACGATCCAGTACACC
GCCGCGCCGACCAACCGCTCGGAGTGGAAGGACACCTTCCACACCGTCAAGGTCGGCATCAACTATCACTTCAACTGGGG
TGGCCCGGTCGTCGCCAAGTACTGA

Upstream 100 bases:

>100_bases
CATCCGCCCCCTATGAAAACCAGGATCGGCGCTGTTGGCCTCACCAGAACCGAACCTGCGGTCGCTTTGCGATTGACTGT
TGCGTTCCGGGTACGGCCGG

Downstream 100 bases:

>100_bases
GGTGACCAAGTACTGAGGTGGCCAAGTACTGAGGTCGCCAAATACTGAGCCAAGCCGTCATCGACTGAGCAGGTCGGTCA
TCGACTGAGATTCAGCCGTT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGRNELVFSRDGITRPLVLMEEELALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIVAPVLTWNGFYIGGQGGYGWG
SSDETVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVGPPNLGDTYSTKLRGFG
DIKGRLGYAAGPALWFVSGGAAVGDLQHRYDGGAANTFVQNKTKWGYTVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYT
AAPTNRSEWKDTFHTVKVGINYHFNWGGPVVAKY

Sequences:

>Translated_274_residues
MGRNELVFSRDGITRPLVLMEEELALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIVAPVLTWNGFYIGGQGGYGWG
SSDETVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVGPPNLGDTYSTKLRGFG
DIKGRLGYAAGPALWFVSGGAAVGDLQHRYDGGAANTFVQNKTKWGYTVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYT
AAPTNRSEWKDTFHTVKVGINYHFNWGGPVVAKY
>Mature_273_residues
GRNELVFSRDGITRPLVLMEEELALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIVAPVLTWNGFYIGGQGGYGWGS
SDETVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVGPPNLGDTYSTKLRGFGD
IKGRLGYAAGPALWFVSGGAAVGDLQHRYDGGAANTFVQNKTKWGYTVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYTA
APTNRSEWKDTFHTVKVGINYHFNWGGPVVAKY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 29321; Mature: 29190

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRNELVFSRDGITRPLVLMEEELALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIV
CCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEE
APVLTWNGFYIGGQGGYGWGSSDETVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGA
EEEEEECCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCE
VVFGLEGDYHWADINGTSSVINVGPPNLGDTYSTKLRGFGDIKGRLGYAAGPALWFVSGG
EEEEECCCEEEEECCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECC
AAVGDLQHRYDGGAANTFVQNKTKWGYTVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYT
CEECCCHHHCCCCCCCCEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEE
AAPTNRSEWKDTFHTVKVGINYHFNWGGPVVAKY
ECCCCCHHHHHCEEEEEEEEEEEEECCCCEEEEC
>Mature Secondary Structure 
GRNELVFSRDGITRPLVLMEEELALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIV
CCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEE
APVLTWNGFYIGGQGGYGWGSSDETVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGA
EEEEEECCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCE
VVFGLEGDYHWADINGTSSVINVGPPNLGDTYSTKLRGFGDIKGRLGYAAGPALWFVSGG
EEEEECCCEEEEECCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECC
AAVGDLQHRYDGGAANTFVQNKTKWGYTVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYT
CEECCCHHHCCCCCCCCEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEE
AAPTNRSEWKDTFHTVKVGINYHFNWGGPVVAKY
ECCCCCHHHHHCEEEEEEEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]