| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749265
Identifier: 86749265
GI number: 86749265
Start: 2433724
End: 2434257
Strand: Direct
Name: 86749265
Synonym: RPB_2144
Alternate gene names: NA
Gene position: 2433724-2434257 (Clockwise)
Preceding gene: 86749263
Following gene: 86749266
Centisome position: 45.65
GC content: 63.3
Gene sequence:
>534_bases ATGCCGAATCGGCAAAATGCTCGAAAGCTCGCAGCGGCTGACGCGGCGCCCGCCCGGGCGACAGCGGAGAACGATCATCG CCTGTCCTATCAGGTGATCTGGGACTTCGTGTCGATCAGCAACAATCTCGAGGACATGCGCCGCGCCTGGGCGAAGCTGT TCGGCATCAGCGGCTCGCAATGGCTGATCCTGATGGCGATCAGCGACCTCGATCAGGGCAACGGCGTTTCGGTCGGCGAC GTCTCCGACAAGATCCACGCGGTCTCGACCTTCGTGACGACGCAGACCAAGATCCTCGAGCGGCTCGGCCTGATCAACCG CGTCAGCTCGACCACCGACGCCCGCGTCGTGCTGATGTCGCTGTCGGAGACGGCGCAGACCAAAATGACCGAACTGAAGC CGCGCTGGGAGGCGCTGCACGAATACATCTTCCGCGACTTCGACGCCGAGGCGCTGCACGACGTCAAGGCCAAGCTCGAC ATGCTGAAGCGTCGCACCAAGGTCGCGATGCAGCGCGTCGCGGACGACAATTAG
Upstream 100 bases:
>100_bases CCGCCGCGAATGCCTTATGAAATAACATTCTTCCCTTCGCTAAAGGCGTGGGGGCGAAACAGACGCACGGGGAAACGGCG CGCGATCGGAGGTCCATCGA
Downstream 100 bases:
>100_bases CTCTTCCGCTCGTTGCACCGCCGTGTCGCGTTCGCGTCACCGCGCGTGATGAGCGACCGGTCGTGACTTCCCCGAACATC TTGTGTGTGACGACGCTTGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPNRQNARKLAAADAAPARATAENDHRLSYQVIWDFVSISNNLEDMRRAWAKLFGISGSQWLILMAISDLDQGNGVSVGD VSDKIHAVSTFVTTQTKILERLGLINRVSSTTDARVVLMSLSETAQTKMTELKPRWEALHEYIFRDFDAEALHDVKAKLD MLKRRTKVAMQRVADDN
Sequences:
>Translated_177_residues MPNRQNARKLAAADAAPARATAENDHRLSYQVIWDFVSISNNLEDMRRAWAKLFGISGSQWLILMAISDLDQGNGVSVGD VSDKIHAVSTFVTTQTKILERLGLINRVSSTTDARVVLMSLSETAQTKMTELKPRWEALHEYIFRDFDAEALHDVKAKLD MLKRRTKVAMQRVADDN >Mature_176_residues PNRQNARKLAAADAAPARATAENDHRLSYQVIWDFVSISNNLEDMRRAWAKLFGISGSQWLILMAISDLDQGNGVSVGDV SDKIHAVSTFVTTQTKILERLGLINRVSSTTDARVVLMSLSETAQTKMTELKPRWEALHEYIFRDFDAEALHDVKAKLDM LKRRTKVAMQRVADDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19931; Mature: 19800
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRQNARKLAAADAAPARATAENDHRLSYQVIWDFVSISNNLEDMRRAWAKLFGISGSQ CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC WLILMAISDLDQGNGVSVGDVSDKIHAVSTFVTTQTKILERLGLINRVSSTTDARVVLMS EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEH LSETAQTKMTELKPRWEALHEYIFRDFDAEALHDVKAKLDMLKRRTKVAMQRVADDN HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PNRQNARKLAAADAAPARATAENDHRLSYQVIWDFVSISNNLEDMRRAWAKLFGISGSQ CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC WLILMAISDLDQGNGVSVGDVSDKIHAVSTFVTTQTKILERLGLINRVSSTTDARVVLMS EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEH LSETAQTKMTELKPRWEALHEYIFRDFDAEALHDVKAKLDMLKRRTKVAMQRVADDN HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA