| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 86749202
GI number: 86749202
Start: 2364511
End: 2365695
Strand: Direct
Name: livK [C]
Synonym: RPB_2081
Alternate gene names: 86749202
Gene position: 2364511-2365695 (Clockwise)
Preceding gene: 86749200
Following gene: 86749203
Centisome position: 44.35
GC content: 65.91
Gene sequence:
>1185_bases ATGAGTTTCGCTTCCCATATTTCGCGTCGCCTGTTGCTCGCGGCCGGCGCCGCGTCGCTGGCACTGATCGCTGTCGGGCC GGCATCGGCCCAGGAGACCCTGAAGGTCGGCCTGGTGGCGGCGATGTCCGGCCAGTCGGCGAAGTCCGGCGAGGCCATCG TCCGCGGTCTGTCGCTGGCGCTGGACGAGATCAACGCCAAGGGCGGCGTGCTCGGCAAGAAGCTGGAACTGGTGGTGCGC GACGACGAGAGCAATCCCGCCAAGGGCGTGATCGCCGCGCGCGAGCTGGTGCAGCGCGAGAAGGTCGCCGCTTACTTCGG CGGCATCGATACGCCGGTGTCGATGGCGATCGTGCCGTTCGCCAATCAGTCCAAGGTGCCGTTCATCGGCGTCTGGGCCG CCGGTACCAAGATCACCCGCAACGGCGCGCCGGAGAACTACGTGTTCCGCGTCTCCGCGGTCGACGAACTGGTCGACATC GCGCTGGTCGACTACGCGGTCAAGAAATACGGCGCCAAGAAGCCGGGCATGATCCTCATCAACAATCCCTGGGGCGAATC CAACGAGGCCGGGCTGAAGAGCGCGCTCGACGCCAAGAAGATGACCGCCGCCGGCATCGAGAAATTCGAGACCGGCGACG TCGACGTCGTGCCGCAGCTCACCCGGCTGAAGGACGCCGGCGCCGACACGCTGTTCATGGTCGCCAATGTCGCGCCCTCC GCGCAGGTGGTGAAGTCGCTCGACCGGATGGGCTGGAGCGTGCCGGTGGTGTCGCATTGGGGCCCGGCCGGCGGGCGTTT CACGGAGTTGGCCGGCCCCAGCGCCGAGAAGGTCCACTTCATCCAGACCTTCAGCTTCTCCGGCAACACCAGCCCGAAAG CCGTGGCGCTGTTCGACGCGCTGAAGAAGAAATATCCCGAGGTCAAGACGGCCGCCGACGTCACCCCCGCGGTCGGCATC GCCAATGCCTACGACGCCATGCATCTCACCGCGCTGGCGATCGCCAAGGCCGGCTCGACCGAAGGCCCGAAGGTCCGCGA AGGCTTCTACCAGATCGGCAGCTATGACGGGCTGATCAAGACCTACAACAAGCCCTTCACCGCCGACAATCACGACGCGC TGTCGCCCTCGGACTATCTGTTCACCTACTTCAAGGGCGCCGAGATCCTGCCGCTGACGAACTGA
Upstream 100 bases:
>100_bases GTGGGCTTTCTCGCGAATTCCGGCGGCTTGGCGCCGATCTCCGGGATGGCACAGCGCTTGCTAGCCAGGATGCGATCTTT CATCCTGCGAGGAGCCCGTG
Downstream 100 bases:
>100_bases CGGCCCTCTTCCCTCTCCCCGCTCTTGGCGGGGAGAGGGTGGCTCGAAGCGGCGAAGCCGGTTCGAGTCGGGTGAGGGGC CAGGCACGGCGCCGACCGAT
Product: twin-arginine translocation pathway signal
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSFASHISRRLLLAAGAASLALIAVGPASAQETLKVGLVAAMSGQSAKSGEAIVRGLSLALDEINAKGGVLGKKLELVVR DDESNPAKGVIAARELVQREKVAAYFGGIDTPVSMAIVPFANQSKVPFIGVWAAGTKITRNGAPENYVFRVSAVDELVDI ALVDYAVKKYGAKKPGMILINNPWGESNEAGLKSALDAKKMTAAGIEKFETGDVDVVPQLTRLKDAGADTLFMVANVAPS AQVVKSLDRMGWSVPVVSHWGPAGGRFTELAGPSAEKVHFIQTFSFSGNTSPKAVALFDALKKKYPEVKTAADVTPAVGI ANAYDAMHLTALAIAKAGSTEGPKVREGFYQIGSYDGLIKTYNKPFTADNHDALSPSDYLFTYFKGAEILPLTN
Sequences:
>Translated_394_residues MSFASHISRRLLLAAGAASLALIAVGPASAQETLKVGLVAAMSGQSAKSGEAIVRGLSLALDEINAKGGVLGKKLELVVR DDESNPAKGVIAARELVQREKVAAYFGGIDTPVSMAIVPFANQSKVPFIGVWAAGTKITRNGAPENYVFRVSAVDELVDI ALVDYAVKKYGAKKPGMILINNPWGESNEAGLKSALDAKKMTAAGIEKFETGDVDVVPQLTRLKDAGADTLFMVANVAPS AQVVKSLDRMGWSVPVVSHWGPAGGRFTELAGPSAEKVHFIQTFSFSGNTSPKAVALFDALKKKYPEVKTAADVTPAVGI ANAYDAMHLTALAIAKAGSTEGPKVREGFYQIGSYDGLIKTYNKPFTADNHDALSPSDYLFTYFKGAEILPLTN >Mature_393_residues SFASHISRRLLLAAGAASLALIAVGPASAQETLKVGLVAAMSGQSAKSGEAIVRGLSLALDEINAKGGVLGKKLELVVRD DESNPAKGVIAARELVQREKVAAYFGGIDTPVSMAIVPFANQSKVPFIGVWAAGTKITRNGAPENYVFRVSAVDELVDIA LVDYAVKKYGAKKPGMILINNPWGESNEAGLKSALDAKKMTAAGIEKFETGDVDVVPQLTRLKDAGADTLFMVANVAPSA QVVKSLDRMGWSVPVVSHWGPAGGRFTELAGPSAEKVHFIQTFSFSGNTSPKAVALFDALKKKYPEVKTAADVTPAVGIA NAYDAMHLTALAIAKAGSTEGPKVREGFYQIGSYDGLIKTYNKPFTADNHDALSPSDYLFTYFKGAEILPLTN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=326, Percent_Identity=22.6993865030675, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI48994941, Length=292, Percent_Identity=22.6027397260274, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41532; Mature: 41401
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFASHISRRLLLAAGAASLALIAVGPASAQETLKVGLVAAMSGQSAKSGEAIVRGLSLA CCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH LDEINAKGGVLGKKLELVVRDDESNPAKGVIAARELVQREKVAAYFGGIDTPVSMAIVPF HHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC ANQSKVPFIGVWAAGTKITRNGAPENYVFRVSAVDELVDIALVDYAVKKYGAKKPGMILI CCCCCCCEEEEEECCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NNPWGESNEAGLKSALDAKKMTAAGIEKFETGDVDVVPQLTRLKDAGADTLFMVANVAPS ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCH AQVVKSLDRMGWSVPVVSHWGPAGGRFTELAGPSAEKVHFIQTFSFSGNTSPKAVALFDA HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHHHHH LKKKYPEVKTAADVTPAVGIANAYDAMHLTALAIAKAGSTEGPKVREGFYQIGSYDGLIK HHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH TYNKPFTADNHDALSPSDYLFTYFKGAEILPLTN HCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCC >Mature Secondary Structure SFASHISRRLLLAAGAASLALIAVGPASAQETLKVGLVAAMSGQSAKSGEAIVRGLSLA CHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH LDEINAKGGVLGKKLELVVRDDESNPAKGVIAARELVQREKVAAYFGGIDTPVSMAIVPF HHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC ANQSKVPFIGVWAAGTKITRNGAPENYVFRVSAVDELVDIALVDYAVKKYGAKKPGMILI CCCCCCCEEEEEECCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NNPWGESNEAGLKSALDAKKMTAAGIEKFETGDVDVVPQLTRLKDAGADTLFMVANVAPS ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCH AQVVKSLDRMGWSVPVVSHWGPAGGRFTELAGPSAEKVHFIQTFSFSGNTSPKAVALFDA HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHHHHH LKKKYPEVKTAADVTPAVGIANAYDAMHLTALAIAKAGSTEGPKVREGFYQIGSYDGLIK HHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH TYNKPFTADNHDALSPSDYLFTYFKGAEILPLTN HCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]