| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cynS [H]
Identifier: 86749179
GI number: 86749179
Start: 2339190
End: 2339678
Strand: Direct
Name: cynS [H]
Synonym: RPB_2057
Alternate gene names: 86749179
Gene position: 2339190-2339678 (Clockwise)
Preceding gene: 86749178
Following gene: 86749180
Centisome position: 43.87
GC content: 60.33
Gene sequence:
>489_bases ATGAAGCGTGCGCAACTCACCGAAAAGCTCGTCGATCTCAAGCGCGAGAAAGGCTGGACCTGGAAGTACATCTGCGAAAA GATCGGCGGCCATTCCGAAGTGCTGGTGGTCGGCGCCATCCTCGGCCAGATGAAGCTGACCAAGCCGCAGGCCGCCGCCG CCGGCGAATTGTTCGGCCTGTCCAAGGTCGAGATCGCGATGCTCAACGAGGTGCCGATGCGCGGCGAGGGCATCACCATG CCGCCGACCGATCCCTTGATCTATCGCTTCTACGAACTGGTGATGATCAACGGCCCGGCCTGGAAGGCGCTGATCGAAGA GGAATTCGGCGACGGCATCATGTCGGCGATCGATTTCGACATGGTGATGGACCGCCTGCCCAACCCCAAGGGCGACCGCG TCAAGATCACGATGTCGGGCAAGTTCCTGCCCTACAAATACTACGGCGCGACCGGCAACAACCAGGAATACGGCTTCAAG GAGGAGTGA
Upstream 100 bases:
>100_bases GGTGCCGGCCGCGAACGGCGCCGGCGCGTCGGCTCCGGCGCAGCTCCGCGCGCGCTGACGCCATCCTCTTTCATCATCAC CACCTCACGGAGAACTCATC
Downstream 100 bases:
>100_bases GGCGGACTCGCTGCGTCGCGACCGACCACAGTTCAATGCATCATGCCCGGCCTCGTGCCGGGCATTGACGTTTTGGCCTT GCAGTGCAGTAAGGCGTGGT
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKRAQLTEKLVDLKREKGWTWKYICEKIGGHSEVLVVGAILGQMKLTKPQAAAAGELFGLSKVEIAMLNEVPMRGEGITM PPTDPLIYRFYELVMINGPAWKALIEEEFGDGIMSAIDFDMVMDRLPNPKGDRVKITMSGKFLPYKYYGATGNNQEYGFK EE
Sequences:
>Translated_162_residues MKRAQLTEKLVDLKREKGWTWKYICEKIGGHSEVLVVGAILGQMKLTKPQAAAAGELFGLSKVEIAMLNEVPMRGEGITM PPTDPLIYRFYELVMINGPAWKALIEEEFGDGIMSAIDFDMVMDRLPNPKGDRVKITMSGKFLPYKYYGATGNNQEYGFK EE >Mature_162_residues MKRAQLTEKLVDLKREKGWTWKYICEKIGGHSEVLVVGAILGQMKLTKPQAAAAGELFGLSKVEIAMLNEVPMRGEGITM PPTDPLIYRFYELVMINGPAWKALIEEEFGDGIMSAIDFDMVMDRLPNPKGDRVKITMSGKFLPYKYYGATGNNQEYGFK EE
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide [H]
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family [H]
Homologues:
Organism=Escherichia coli, GI1786535, Length=147, Percent_Identity=36.734693877551, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 [H]
Pfam domain/function: PF02560 Cyanate_lyase [H]
EC number: =4.2.1.104 [H]
Molecular weight: Translated: 18243; Mature: 18243
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAQLTEKLVDLKREKGWTWKYICEKIGGHSEVLVVGAILGQMKLTKPQAAAAGELFGL CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCHHHHHHHCCC SKVEIAMLNEVPMRGEGITMPPTDPLIYRFYELVMINGPAWKALIEEEFGDGIMSAIDFD CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHCCHHHHHHHHH MVMDRLPNPKGDRVKITMSGKFLPYKYYGATGNNQEYGFKEE HHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKRAQLTEKLVDLKREKGWTWKYICEKIGGHSEVLVVGAILGQMKLTKPQAAAAGELFGL CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCHHHHHHHCCC SKVEIAMLNEVPMRGEGITMPPTDPLIYRFYELVMINGPAWKALIEEEFGDGIMSAIDFD CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHCCHHHHHHHHH MVMDRLPNPKGDRVKITMSGKFLPYKYYGATGNNQEYGFKEE HHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA