Click here to switch to the map view.

The map label for this gene is 86748984

Identifier: 86748984

GI number: 86748984

Start: 2126517

End: 2127071

Strand: Direct

Name: 86748984

Synonym: RPB_1861

Alternate gene names: NA

Gene position: 2126517-2127071 (Clockwise)

Preceding gene: 86748983

Following gene: 86748985

Centisome position: 39.88

GC content: 66.49

Gene sequence:

>555_bases
ATGACCGGTATCGACGCCAGGCAGGCCGCGCAGGCGCTGTCGGAGATCGACGGCGTGGTGCGCCGGGTCCGCCAATCGCG
GATCTACGACATCGCCAGCCTGATGCTGATGCAATGGGGCGCGCTGGTGGTTGCCGGCTATCTCGGCTCCTATGTCTGGC
CGCGTGCGGCCGGCTGGTTGTGGGTCGCGGTCAATGTCGTCGGCATTGCCGGCTCGTTTTCGATCGGCGCCTTCGTCCGG
CGGCGAACCGGCGCCGGCGGCTTCGATCTGCGGGTGCTGCTGGCGCTGTTGCTGTTCTTCGCCTTCGGCTATTTCACTTG
CGTGCTCGGCCATTTCGGCCCGCGTGAACTGGGCGCGTTCTGGGCGCTGTATTTCATGCTGGTCTACACCATCGCCGGCT
TGTGGGTCGGCCGCGCCTTCGTGGCGATCGGGCTCGGCATCGCGGCGTTGACGCTGCTCGGCTACTTCTTTGTCGGCGTG
TGGTTCGAGCCGTGGATGGCGGTGGTCAATGGCGGCGGTTTGATCCTGGGCGGCCTCTGGATGCGTCGGGACTGA

Upstream 100 bases:

>100_bases
GGGTCAAGATCCTGCCCGGCATCAACCACATGGGCATCGTCGGCAATCCGGCCGCCGTGTCGACGATTGCGGACGATGTC
GCCGGCGTGGGCGCCGGCAC

Downstream 100 bases:

>100_bases
CGATGGCCGCGTTCGACGACATCATCCACCAGCCGCTGCGGCTGAAGATCATGGCGGCGCTGAATGCGCTGCCGGATGCG
CAGGGCATGGAATTCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTGIDARQAAQALSEIDGVVRRVRQSRIYDIASLMLMQWGALVVAGYLGSYVWPRAAGWLWVAVNVVGIAGSFSIGAFVR
RRTGAGGFDLRVLLALLLFFAFGYFTCVLGHFGPRELGAFWALYFMLVYTIAGLWVGRAFVAIGLGIAALTLLGYFFVGV
WFEPWMAVVNGGGLILGGLWMRRD

Sequences:

>Translated_184_residues
MTGIDARQAAQALSEIDGVVRRVRQSRIYDIASLMLMQWGALVVAGYLGSYVWPRAAGWLWVAVNVVGIAGSFSIGAFVR
RRTGAGGFDLRVLLALLLFFAFGYFTCVLGHFGPRELGAFWALYFMLVYTIAGLWVGRAFVAIGLGIAALTLLGYFFVGV
WFEPWMAVVNGGGLILGGLWMRRD
>Mature_183_residues
TGIDARQAAQALSEIDGVVRRVRQSRIYDIASLMLMQWGALVVAGYLGSYVWPRAAGWLWVAVNVVGIAGSFSIGAFVRR
RTGAGGFDLRVLLALLLFFAFGYFTCVLGHFGPRELGAFWALYFMLVYTIAGLWVGRAFVAIGLGIAALTLLGYFFVGVW
FEPWMAVVNGGGLILGGLWMRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20139; Mature: 20008

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIDARQAAQALSEIDGVVRRVRQSRIYDIASLMLMQWGALVVAGYLGSYVWPRAAGWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WVAVNVVGIAGSFSIGAFVRRRTGAGGFDLRVLLALLLFFAFGYFTCVLGHFGPRELGAF
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WALYFMLVYTIAGLWVGRAFVAIGLGIAALTLLGYFFVGVWFEPWMAVVNGGGLILGGLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MRRD
HCCC
>Mature Secondary Structure 
TGIDARQAAQALSEIDGVVRRVRQSRIYDIASLMLMQWGALVVAGYLGSYVWPRAAGWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WVAVNVVGIAGSFSIGAFVRRRTGAGGFDLRVLLALLLFFAFGYFTCVLGHFGPRELGAF
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WALYFMLVYTIAGLWVGRAFVAIGLGIAALTLLGYFFVGVWFEPWMAVVNGGGLILGGLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MRRD
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA