| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748954
Identifier: 86748954
GI number: 86748954
Start: 2094425
End: 2095420
Strand: Direct
Name: 86748954
Synonym: RPB_1831
Alternate gene names: NA
Gene position: 2094425-2095420 (Clockwise)
Preceding gene: 86748953
Following gene: 86748956
Centisome position: 39.28
GC content: 61.75
Gene sequence:
>996_bases ATGAAGAAAACAATTCTGTCGGTCGCGGCTGTGCTCGCTGTCGGCGTTACCTCCGCCTCCGCCGCCGACCTGCCCGCCAA GGTCTACACCAAGGCTCCGCCGATCGTGGCGTTCGACCCCTGGGACATCGCGTTCGGCAGCGCGATCATGAGCGACTACG TGTTCCGCGGCATCACCCAGTCGAACCACAAGCCGTCGGTGAACGCCTATTTCGAGCCGCGCTACAACGTCACCAAGGAC CTGCAGCTCTACGTCGGCACCTCGTTCTCCAGCATCTCTTTCCCGAACCGCGCCGCTGCTGAAGTCGATATCTACGGCGG TATCCGGCCGACCTTCGGCGCCTTCGCCTTCGACTTCGGTGTGTTCGGCTATCTGTATCCGGGCGGAACCTGCCAGTTCG GCGGCACCGGCACGGACAACACCGGCCGCTTCTGGGGCTCCGACTGCGCGACCAACGCGATCTTCAACGGCAACGTGATG AAGAAGGACGCGAGCTTCTTCGAGGGCTACGCCAAGGTGATGTGGACCGCGAACGAGATGTTCTCGTTCGGCGCCAACGA ATACTACTCGCCGAACTTCTTGAACACCGGCGCCTGGGGCAACTACGCATCGGTGACCGCCAAGTACACCGCGCCGGCCA CGTATTTCGGCGGTGGCGTCGGCATGTACATCTCGGGTGAATACGGCCATCAGTGGTTCGGCACGTCCGACTCGTTCTAC GGCGTTCCGGCTTCGCCGTTCGGCATCAAGTACGCCGACTACAACACCTGGAACGTCGGCATCGGCTTCAACTACAAGGT GTTCACGCTCGACCTGCGCTACTCGGACACCGACCTGTCCAAGGCGAACTGCAACGCCTTCACCAGCGACTACACCGCCA CTCCGAGCGGCGACTTCTCCCCGATCAATCCGTCGGGCGTCGGTTCGAAGTGGTGCGGTGCCACCTTCATCGCCAAGCTG TCGGCTGACCTGACGCTGATGAGCAACATCAAGTAA
Upstream 100 bases:
>100_bases TTCCTCGTCTCAGCCGCAGATTGTGCGGGAGTTACTTCACAGGTCGATATCGCGTCTCTGGACTTCGGGTCGGGCTGGTT TCAAATCGATGGGGATCATC
Downstream 100 bases:
>100_bases GCGATCCCTTCTGGGATACGACGGGCGGCAGAGCGATCTGCCGCCCGTTTTGTTTTGCGGAAGGGTCGATTGTCTGCCGA CACGCCTCTCGTCCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKKTILSVAAVLAVGVTSASAADLPAKVYTKAPPIVAFDPWDIAFGSAIMSDYVFRGITQSNHKPSVNAYFEPRYNVTKD LQLYVGTSFSSISFPNRAAAEVDIYGGIRPTFGAFAFDFGVFGYLYPGGTCQFGGTGTDNTGRFWGSDCATNAIFNGNVM KKDASFFEGYAKVMWTANEMFSFGANEYYSPNFLNTGAWGNYASVTAKYTAPATYFGGGVGMYISGEYGHQWFGTSDSFY GVPASPFGIKYADYNTWNVGIGFNYKVFTLDLRYSDTDLSKANCNAFTSDYTATPSGDFSPINPSGVGSKWCGATFIAKL SADLTLMSNIK
Sequences:
>Translated_331_residues MKKTILSVAAVLAVGVTSASAADLPAKVYTKAPPIVAFDPWDIAFGSAIMSDYVFRGITQSNHKPSVNAYFEPRYNVTKD LQLYVGTSFSSISFPNRAAAEVDIYGGIRPTFGAFAFDFGVFGYLYPGGTCQFGGTGTDNTGRFWGSDCATNAIFNGNVM KKDASFFEGYAKVMWTANEMFSFGANEYYSPNFLNTGAWGNYASVTAKYTAPATYFGGGVGMYISGEYGHQWFGTSDSFY GVPASPFGIKYADYNTWNVGIGFNYKVFTLDLRYSDTDLSKANCNAFTSDYTATPSGDFSPINPSGVGSKWCGATFIAKL SADLTLMSNIK >Mature_331_residues MKKTILSVAAVLAVGVTSASAADLPAKVYTKAPPIVAFDPWDIAFGSAIMSDYVFRGITQSNHKPSVNAYFEPRYNVTKD LQLYVGTSFSSISFPNRAAAEVDIYGGIRPTFGAFAFDFGVFGYLYPGGTCQFGGTGTDNTGRFWGSDCATNAIFNGNVM KKDASFFEGYAKVMWTANEMFSFGANEYYSPNFLNTGAWGNYASVTAKYTAPATYFGGGVGMYISGEYGHQWFGTSDSFY GVPASPFGIKYADYNTWNVGIGFNYKVFTLDLRYSDTDLSKANCNAFTSDYTATPSGDFSPINPSGVGSKWCGATFIAKL SADLTLMSNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35738; Mature: 35738
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTILSVAAVLAVGVTSASAADLPAKVYTKAPPIVAFDPWDIAFGSAIMSDYVFRGITQ CCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCC SNHKPSVNAYFEPRYNVTKDLQLYVGTSFSSISFPNRAAAEVDIYGGIRPTFGAFAFDFG CCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHC VFGYLYPGGTCQFGGTGTDNTGRFWGSDCATNAIFNGNVMKKDASFFEGYAKVMWTANEM CCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCEEECCHHHHHHHHHEEEEHHHH FSFGANEYYSPNFLNTGAWGNYASVTAKYTAPATYFGGGVGMYISGEYGHQWFGTSDSFY HHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCEEEEEECCCCCEEECCCCCCC GVPASPFGIKYADYNTWNVGIGFNYKVFTLDLRYSDTDLSKANCNAFTSDYTATPSGDFS CCCCCCCEEEEECCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PINPSGVGSKWCGATFIAKLSADLTLMSNIK CCCCCCCCCCHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MKKTILSVAAVLAVGVTSASAADLPAKVYTKAPPIVAFDPWDIAFGSAIMSDYVFRGITQ CCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCC SNHKPSVNAYFEPRYNVTKDLQLYVGTSFSSISFPNRAAAEVDIYGGIRPTFGAFAFDFG CCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHC VFGYLYPGGTCQFGGTGTDNTGRFWGSDCATNAIFNGNVMKKDASFFEGYAKVMWTANEM CCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCEEECCHHHHHHHHHEEEEHHHH FSFGANEYYSPNFLNTGAWGNYASVTAKYTAPATYFGGGVGMYISGEYGHQWFGTSDSFY HHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCEEEEEECCCCCEEECCCCCCC GVPASPFGIKYADYNTWNVGIGFNYKVFTLDLRYSDTDLSKANCNAFTSDYTATPSGDFS CCCCCCCEEEEECCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PINPSGVGSKWCGATFIAKLSADLTLMSNIK CCCCCCCCCCHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA