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The map label for this gene is glcF [H]

Identifier: 86748952

GI number: 86748952

Start: 2091628

End: 2092941

Strand: Direct

Name: glcF [H]

Synonym: RPB_1829

Alternate gene names: 86748952

Gene position: 2091628-2092941 (Clockwise)

Preceding gene: 86748951

Following gene: 86748953

Centisome position: 39.23

GC content: 65.14

Gene sequence:

>1314_bases
ATGAAAACCGAATTCAGCCTCGCCCAGCTCGCCGATCCGGACATCGCCGAGGCCGACAAGATCCTGCGGGCCTGCGTGCA
CTGCGGATTCTGCACGGCGACGTGCCCGACCTATGTGCTGCTCGGCGACGAACTCGACTCACCGCGCGGTCGAATCTACC
TGATCAAGGAGATGCTGGAGAGCAACAAGCCGCCGACCGCGGACGTGGTCAAGCACATCGACCGCTGCCTGTCGTGCCTC
GCCTGCATGACCACGTGTCCCTCCGGCGTGAACTACATGCATCTGGTCGATCAGGCGAGGGCGCGGATCGAGAAGGACTA
CACGCGGCCGTTCTGGGATCGGCTCATCCGCGAAGCGCTGTCGTGGATGATGCCGCATCCCGGCATGTTCCGGCTCGGCA
TGTGGGCGGCGCGGATCGTGCGCCCGATTGCGGGGCTGCTGCCCGGCTCGCACGATCTCGCCCATCCGACGTTCCTGAGC
CGGGTCAAGGCGATGTTGGCGCTGGCGCCGAAGCATCTGCCGGAGCGCGGACCGGACTCCGGAACCACGTTCCCGGCGAT
CGGGACAAAGCGCGGGCGCGTCGCGCTGCTGCACGGCTGCGCCCAGCAGGTGCTGGCGCCGCGAATCAACCGGGCCGCGA
TCAATCTGCTGACCCGCCACGGCATCGAGGTCGTCCTCGCGGCCGACGAGGCCTGTTGCGGTGCCCTGATCCATCACCTC
GGCCGCGATACCCGCACGCTCGAATATGCCCGCACCAACATCAAGGCGTGGCTCGCCGAGATCGAGCGCGGCGGCCTCGA
CGCGATTCTGGTGACGACGTCGGGCTGCGGCACGGTGATCAAGGACTACGGCTACATGCTGCGCGAAGACCCGGCGTTCG
CCGCATCGGCCGCGAGGGTCTCGGCGCTCGCCAAGGATATCAGCGAATATGTCGGCGATCTGGAGCTGTCGGTGCCGCGG
CCGCAGCGCGATGTCGTGGTCGCTTATCACTCCGCCTGTTCGCTGCAGCACGGTCAAAAAGTCACGCGGCTGCCCAAAGA
ATTGCTTTCCAAGACCGGATTCGTGGTGAAAGATATCCCGGAGAGTCATTTGTGTTGTGGTTCGGCGGGCACGTACAACA
TTCTCCAGCCTGACATCGCGACCCGATTGCGCGACCGCAAGGTCGCCAACATCGCTGCCGTCAAGCCGGACATGATCGCC
GCTGGGAACATCGGCTGCATGGTGCAGATCGCCAGCGGAACGGAAGTCCCTGTGGTGCACACGATTGAACTTCTCGATTG
GGCGACAGGCGGTCCCCGGCCTGCGAGTACCTGA

Upstream 100 bases:

>100_bases
CGCAACCGCGCGGCCTCGCCGCGCTCGGGCAGCGGGTCAAGAACAGCTTCGATCCGAGGAACGTTCTCAATCGCGGCCGG
TTGTCGCGAGGACAGCCAGC

Downstream 100 bases:

>100_bases
CTGCGCTGCAGGCCTGCTGGCGGAGAGCGTGATTGCCCACAGGCGATCCGCACAACAGGAGGACGACGATGGCGAAGGAC
AAGAAGTCCAAAAAGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLESNKPPTADVVKHIDRCLSCL
ACMTTCPSGVNYMHLVDQARARIEKDYTRPFWDRLIREALSWMMPHPGMFRLGMWAARIVRPIAGLLPGSHDLAHPTFLS
RVKAMLALAPKHLPERGPDSGTTFPAIGTKRGRVALLHGCAQQVLAPRINRAAINLLTRHGIEVVLAADEACCGALIHHL
GRDTRTLEYARTNIKAWLAEIERGGLDAILVTTSGCGTVIKDYGYMLREDPAFAASAARVSALAKDISEYVGDLELSVPR
PQRDVVVAYHSACSLQHGQKVTRLPKELLSKTGFVVKDIPESHLCCGSAGTYNILQPDIATRLRDRKVANIAAVKPDMIA
AGNIGCMVQIASGTEVPVVHTIELLDWATGGPRPAST

Sequences:

>Translated_437_residues
MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLESNKPPTADVVKHIDRCLSCL
ACMTTCPSGVNYMHLVDQARARIEKDYTRPFWDRLIREALSWMMPHPGMFRLGMWAARIVRPIAGLLPGSHDLAHPTFLS
RVKAMLALAPKHLPERGPDSGTTFPAIGTKRGRVALLHGCAQQVLAPRINRAAINLLTRHGIEVVLAADEACCGALIHHL
GRDTRTLEYARTNIKAWLAEIERGGLDAILVTTSGCGTVIKDYGYMLREDPAFAASAARVSALAKDISEYVGDLELSVPR
PQRDVVVAYHSACSLQHGQKVTRLPKELLSKTGFVVKDIPESHLCCGSAGTYNILQPDIATRLRDRKVANIAAVKPDMIA
AGNIGCMVQIASGTEVPVVHTIELLDWATGGPRPAST
>Mature_437_residues
MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLESNKPPTADVVKHIDRCLSCL
ACMTTCPSGVNYMHLVDQARARIEKDYTRPFWDRLIREALSWMMPHPGMFRLGMWAARIVRPIAGLLPGSHDLAHPTFLS
RVKAMLALAPKHLPERGPDSGTTFPAIGTKRGRVALLHGCAQQVLAPRINRAAINLLTRHGIEVVLAADEACCGALIHHL
GRDTRTLEYARTNIKAWLAEIERGGLDAILVTTSGCGTVIKDYGYMLREDPAFAASAARVSALAKDISEYVGDLELSVPR
PQRDVVVAYHSACSLQHGQKVTRLPKELLSKTGFVVKDIPESHLCCGSAGTYNILQPDIATRLRDRKVANIAAVKPDMIA
AGNIGCMVQIASGTEVPVVHTIELLDWATGGPRPAST

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=428, Percent_Identity=43.6915887850467, Blast_Score=339, Evalue=3e-94,
Organism=Escherichia coli, GI1786497, Length=243, Percent_Identity=25.9259259259259, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 47581; Mature: 47581

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE
CCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCEEEHHHHHH
SNKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARARIEKDYTRPFWDRLIREAL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SWMMPHPGMFRLGMWAARIVRPIAGLLPGSHDLAHPTFLSRVKAMLALAPKHLPERGPDS
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GTTFPAIGTKRGRVALLHGCAQQVLAPRINRAAINLLTRHGIEVVLAADEACCGALIHHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
GRDTRTLEYARTNIKAWLAEIERGGLDAILVTTSGCGTVIKDYGYMLREDPAFAASAARV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCHHHCCCCHHHHHHHHH
SALAKDISEYVGDLELSVPRPQRDVVVAYHSACSLQHGQKVTRLPKELLSKTGFVVKDIP
HHHHHHHHHHHCCEEECCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCCCEEECCC
ESHLCCGSAGTYNILQPDIATRLRDRKVANIAAVKPDMIAAGNIGCMVQIASGTEVPVVH
CHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCEE
TIELLDWATGGPRPAST
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE
CCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCEEEHHHHHH
SNKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARARIEKDYTRPFWDRLIREAL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SWMMPHPGMFRLGMWAARIVRPIAGLLPGSHDLAHPTFLSRVKAMLALAPKHLPERGPDS
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GTTFPAIGTKRGRVALLHGCAQQVLAPRINRAAINLLTRHGIEVVLAADEACCGALIHHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
GRDTRTLEYARTNIKAWLAEIERGGLDAILVTTSGCGTVIKDYGYMLREDPAFAASAARV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCHHHCCCCHHHHHHHHH
SALAKDISEYVGDLELSVPRPQRDVVVAYHSACSLQHGQKVTRLPKELLSKTGFVVKDIP
HHHHHHHHHHHCCEEECCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCCCEEECCC
ESHLCCGSAGTYNILQPDIATRLRDRKVANIAAVKPDMIAAGNIGCMVQIASGTEVPVVH
CHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCEE
TIELLDWATGGPRPAST
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]