| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748912
Identifier: 86748912
GI number: 86748912
Start: 2050298
End: 2050843
Strand: Direct
Name: 86748912
Synonym: RPB_1789
Alternate gene names: NA
Gene position: 2050298-2050843 (Clockwise)
Preceding gene: 86748911
Following gene: 86748913
Centisome position: 38.46
GC content: 61.36
Gene sequence:
>546_bases ATGATGTCGTTGTTGCTTTCGCGCGCTGTGCTCTTGGCGCGGCGGTTCAGTCGCAATCGCCGCGGGTCGGCTGCGATCGA ATTCGCGATGATCGCGCCGATCTTCATCGCATTGCTGTTCGCGATCATCGAGACCGCCTTCGTGTTTCTCGCCAGTCAGG TGCTCGAGACCGCGGTGCAGGATTCGGCGCGGTTGATCCTCACCGGACAGGCGCAGGCGGCGTCCTATACGCAATCCCAG TTCAAGACCGATCTGTGCAACCGGCTCAAGGCGCTGTTCAGCTGCGACGGCGTCTATGTCGACGTGCAGAGCTACGGCAG CGATTTCTCGACGGTGAGCATCACCACGCCGATCGACTCCAGCAAGAATTTCGTCAACACCATGAAATACAGCCCCGGCG CCGCCGGCGACATCGTGGTGGTGCGGGCGTTCTATCAATGGCCGCTGTTCGTCACCGGGCTCGGCTGGAACATCGCTAAT CTCGCCGACAGCAAGCGGCTGTTGAGCGCGACCGCGGCGTTCCGCAACGAGCCTTACAGCAACTAG
Upstream 100 bases:
>100_bases CGCCGCGGTCGATTTTGTTCAGATCGGGCGAAACACTTCCACAATCAGTTTCGACTAGCCTTCGTCGCAGTCCGGTTCGG TTGATGTCGAGAGTCCGTCG
Downstream 100 bases:
>100_bases GATCGACCGATGAAAGCGCTGGTGCAGATCTGGGTCGATGCGCGCCGTTGCAGCATGCGGCTGGCGAAGGACCGCAGCGG GCTCGCGGCGACGGAATTCG
Product: TadE-like
Products: NA
Alternate protein names: TadE-Like; Transmembrane Protein; Flp Pilus Assembly Protein TadG; TadE-Like Protein; TadG-Like Pilus Assembly Protein; Signal Peptide
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MMSLLLSRAVLLARRFSRNRRGSAAIEFAMIAPIFIALLFAIIETAFVFLASQVLETAVQDSARLILTGQAQAASYTQSQ FKTDLCNRLKALFSCDGVYVDVQSYGSDFSTVSITTPIDSSKNFVNTMKYSPGAAGDIVVVRAFYQWPLFVTGLGWNIAN LADSKRLLSATAAFRNEPYSN
Sequences:
>Translated_181_residues MMSLLLSRAVLLARRFSRNRRGSAAIEFAMIAPIFIALLFAIIETAFVFLASQVLETAVQDSARLILTGQAQAASYTQSQ FKTDLCNRLKALFSCDGVYVDVQSYGSDFSTVSITTPIDSSKNFVNTMKYSPGAAGDIVVVRAFYQWPLFVTGLGWNIAN LADSKRLLSATAAFRNEPYSN >Mature_181_residues MMSLLLSRAVLLARRFSRNRRGSAAIEFAMIAPIFIALLFAIIETAFVFLASQVLETAVQDSARLILTGQAQAASYTQSQ FKTDLCNRLKALFSCDGVYVDVQSYGSDFSTVSITTPIDSSKNFVNTMKYSPGAAGDIVVVRAFYQWPLFVTGLGWNIAN LADSKRLLSATAAFRNEPYSN
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19846; Mature: 19846
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLLLSRAVLLARRFSRNRRGSAAIEFAMIAPIFIALLFAIIETAFVFLASQVLETAVQ CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSARLILTGQAQAASYTQSQFKTDLCNRLKALFSCDGVYVDVQSYGSDFSTVSITTPIDS CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEEECCCCC SKNFVNTMKYSPGAAGDIVVVRAFYQWPLFVTGLGWNIANLADSKRLLSATAAFRNEPYS CCHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC N C >Mature Secondary Structure MMSLLLSRAVLLARRFSRNRRGSAAIEFAMIAPIFIALLFAIIETAFVFLASQVLETAVQ CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSARLILTGQAQAASYTQSQFKTDLCNRLKALFSCDGVYVDVQSYGSDFSTVSITTPIDS CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEEECCCCC SKNFVNTMKYSPGAAGDIVVVRAFYQWPLFVTGLGWNIANLADSKRLLSATAAFRNEPYS CCHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA