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The map label for this gene is 86748837

Identifier: 86748837

GI number: 86748837

Start: 1953106

End: 1953984

Strand: Direct

Name: 86748837

Synonym: RPB_1714

Alternate gene names: NA

Gene position: 1953106-1953984 (Clockwise)

Preceding gene: 86748836

Following gene: 86748838

Centisome position: 36.63

GC content: 65.3

Gene sequence:

>879_bases
TTGATCTACGACATCCGCCACGTCACGTCCTACAGCTACGGCAGTCCGGTCAGCTACGCGCGCTGTTCCCTGCGGCTGAA
GCCGATGAGCGACGCCAGCCAGAAACTGATCTCGCACAGTATCGAGATCAAGCCGAAGCCGGCGACGCGCACGACACGGG
TCGATTTCTTCGGCATTCCGACCGACAGCATCGTGATCGAGACGCCGCACAAGGTGTTGCGGATCGACAGCCGCTCCCGC
GTCGAAGTCGATCGCAAGCCCCCGGCACGCGACAGCGGCAGCGCGGCGTGGGAAAGCGTGCGCGAGGCGGCGCTGGATTG
CGCCAGCCTCGATGCGGACGCGCCGGTCGGCTACGTGTTTCCGAGCTCGCTGGTTCCGATCCAGCACGCCGTCACCCGCT
ACGCGGCGAAGAGTTTTGCGCCGGCGCGCGGCATTCTGGCCGCAACTGCCGATCTGATGCGCCGCATTCACAGCGACTTC
AAATACGACCCGAAGGCGACGGTGATCTCGACGCCGCTCGCGGAAGTTTTCGAGAAGCGCCACGGCGTCTGCCAGGATTT
CGCACACGTGATGATCGCTGGCCTGCGCGGGCTCGGCGTGCCGGCCGCCTATGTCAGTGGTTATCTGCGGACCTATCCGC
CGGAAGGCCAGCCGCGGCTGCAAGGCGCCGACGCCACCCACGCCTGGGTCACAGTGTGGTGCGGCAACGAGACCGGCTGG
GTCGGGTTCGATCCGACCAATGATCTGCTGATCGGCAACGACCATATCGTGCTCGCGGTCGGCCGCGATTTCTCCGACGT
CTCGCCGGTCGACGGCGTGATCGTCGGCTCGCGCAAGCAGAAATTGTCGGTCGCGGTCGACGTCATTCCGATCGAGTAG

Upstream 100 bases:

>100_bases
CGGTGGAGCAGGATCTGCTGTCGCTGGCCGATGCGATCGGGGCGCACTACTTCCCGCACGGCGCCAGCGCGACGCGCCCG
GAAAAGCTGACGGGGTTGGC

Downstream 100 bases:

>100_bases
TCCGGTAGGTTCCCGAGGACTGCATCCATCGACGGCCAACTAATTAGTATCGTCGTACCTGTTGCGACCTCGGATTTGTC
CCAGGGTCGTTCTTTAACGA

Product: transglutaminase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIYDIRHVTSYSYGSPVSYARCSLRLKPMSDASQKLISHSIEIKPKPATRTTRVDFFGIPTDSIVIETPHKVLRIDSRSR
VEVDRKPPARDSGSAAWESVREAALDCASLDADAPVGYVFPSSLVPIQHAVTRYAAKSFAPARGILAATADLMRRIHSDF
KYDPKATVISTPLAEVFEKRHGVCQDFAHVMIAGLRGLGVPAAYVSGYLRTYPPEGQPRLQGADATHAWVTVWCGNETGW
VGFDPTNDLLIGNDHIVLAVGRDFSDVSPVDGVIVGSRKQKLSVAVDVIPIE

Sequences:

>Translated_292_residues
MIYDIRHVTSYSYGSPVSYARCSLRLKPMSDASQKLISHSIEIKPKPATRTTRVDFFGIPTDSIVIETPHKVLRIDSRSR
VEVDRKPPARDSGSAAWESVREAALDCASLDADAPVGYVFPSSLVPIQHAVTRYAAKSFAPARGILAATADLMRRIHSDF
KYDPKATVISTPLAEVFEKRHGVCQDFAHVMIAGLRGLGVPAAYVSGYLRTYPPEGQPRLQGADATHAWVTVWCGNETGW
VGFDPTNDLLIGNDHIVLAVGRDFSDVSPVDGVIVGSRKQKLSVAVDVIPIE
>Mature_292_residues
MIYDIRHVTSYSYGSPVSYARCSLRLKPMSDASQKLISHSIEIKPKPATRTTRVDFFGIPTDSIVIETPHKVLRIDSRSR
VEVDRKPPARDSGSAAWESVREAALDCASLDADAPVGYVFPSSLVPIQHAVTRYAAKSFAPARGILAATADLMRRIHSDF
KYDPKATVISTPLAEVFEKRHGVCQDFAHVMIAGLRGLGVPAAYVSGYLRTYPPEGQPRLQGADATHAWVTVWCGNETGW
VGFDPTNDLLIGNDHIVLAVGRDFSDVSPVDGVIVGSRKQKLSVAVDVIPIE

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0607 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 31841; Mature: 31841

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDIRHVTSYSYGSPVSYARCSLRLKPMSDASQKLISHSIEIKPKPATRTTRVDFFGIP
CEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCEEECCCCCCCEEEEEEEECC
TDSIVIETPHKVLRIDSRSRVEVDRKPPARDSGSAAWESVREAALDCASLDADAPVGYVF
CCCEEEECCHHEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
PSSLVPIQHAVTRYAAKSFAPARGILAATADLMRRIHSDFKYDPKATVISTPLAEVFEKR
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
HGVCQDFAHVMIAGLRGLGVPAAYVSGYLRTYPPEGQPRLQGADATHAWVTVWCGNETGW
CCHHHHHHHHHHHHHHCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCE
VGFDPTNDLLIGNDHIVLAVGRDFSDVSPVDGVIVGSRKQKLSVAVDVIPIE
EEECCCCCEEECCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEECC
>Mature Secondary Structure
MIYDIRHVTSYSYGSPVSYARCSLRLKPMSDASQKLISHSIEIKPKPATRTTRVDFFGIP
CEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCEEECCCCCCCEEEEEEEECC
TDSIVIETPHKVLRIDSRSRVEVDRKPPARDSGSAAWESVREAALDCASLDADAPVGYVF
CCCEEEECCHHEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
PSSLVPIQHAVTRYAAKSFAPARGILAATADLMRRIHSDFKYDPKATVISTPLAEVFEKR
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
HGVCQDFAHVMIAGLRGLGVPAAYVSGYLRTYPPEGQPRLQGADATHAWVTVWCGNETGW
CCHHHHHHHHHHHHHHCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCE
VGFDPTNDLLIGNDHIVLAVGRDFSDVSPVDGVIVGSRKQKLSVAVDVIPIE
EEECCCCCEEECCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]