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The map label for this gene is 86748836

Identifier: 86748836

GI number: 86748836

Start: 1950608

End: 1953109

Strand: Direct

Name: 86748836

Synonym: RPB_1713

Alternate gene names: NA

Gene position: 1950608-1953109 (Clockwise)

Preceding gene: 86748835

Following gene: 86748837

Centisome position: 36.59

GC content: 69.86

Gene sequence:

>2502_bases
TTGGCGGAGCAGAGCAGTCAGTCGAAACGCGTCCGTCCGCGTGACCGGAAGGTCGCGCAATGGACTCGCGACTATGCGCG
ACTGCCCGGCATTCCCGACGAATTCATCGGCGACGACGGCGCGCCCCGCGCGGTGTGGAGCCGTTACTTCGACGCCTTCG
CGGGCCTTGCGCCCGACGAGATCGAGCGTCGATTCCGCGCTGCAGACCGCCATCTGCGCGACGCCGGCGTCACCTATCGC
GCGCCGGGCGACGCCACCGAGCGCGCCTGGCCGCTGAGTCACGTTCCGCTGCTGATCGACGATGCCGAATGGCAGCAGAT
CGCGGCCGGGATCGCGCAGCGTGCGACGCTGCTCGAACACGTGTTGCAGGATCTCTACGGCGACGGGCGATTGATCGCGG
AGGGGGCGGTGCCGGCTGCGGCGATTGCCGGCAGCCCGGAATATGTGCGCGCGATCTGCGGTGTGAAGCCGCCGGGCGGC
CGCTATCTGAATCTCTACGCGGCCGATATCGGCCGCGGTCCGGACGGCCGCTGGTGGGTGCTCGGCGATCGCACGCAAGC
GCCGTCGGGCACCGGTTACGCGCTGGAAAACCGGCTGGTGCTGTCGCGCGCCTTCACCGATCTCTACAAGTCGATGAATG
TCGAACGCGTCGCGCCGTTCTTCGAGGCGTTCCGCGACAGCCTGCGCGCCAGTGCGGACCGCGACGAGCCGCGGATCGGC
GTGCTGACGCCGGGGCCGTTCAGCGAGACCTATTTCGAGCACGCCACGCTGGCGCGCTATCTCGGCTTCCTGCTGGTCGA
AGGCGACGACCTCGCGGTCTCCGGCGATCGTGTCCACATCCGCACCGTGGCCGGGTTGAAGCGGCTCGACGTGCTGCTGC
GCCGGGTCGATTCCAATTCGCTCGATCCGCTCGAACTCGACGCCTCGTCGCAACTCGGCGTGCCGGGACTGATCGACGTG
CTGCGCAAGAGCGGCGTCGTCGTCGCCAACATGCCCGGCGCCGGCGTGATCGAGGCGCGGTCGCTGCTCGGATTTCTGCC
GAGTCTGAGCCGCCGCCTGCTCGACCAAGATCTGGCGATGCCGCACATCGCCACCTGGTGGTGCGGTCAGGCGCGGGCCC
GGGACGAGGTGCTGTCGCGGCTCGACGACTTCGTCATCGAAGGGGCCTATGGTCCGACCGTGCCGGGCTTCTCCCACAGC
GGCGCCGTGCTGCCCGCGGAATTGCCGCCGGCGGTGCGCGACCGGCTCCGCGATGCGATCGCCACCCGCGGCATCGACTA
CGTGGCGCAGGAACAGGTGCGGCTGTCGACCACGCCGGTATGGGACGACGGCAAGCTGGCGCCGCGGCCGTTCGTGCTGC
GGGTGTTCGCCGCGGCGACCGAACACGGCTGGACGGTCATGCCCGGCGGCTTCTGCCGGATTGCCGAGCGGCTCGACTCG
CGTGCGGTGTCGATGGGCGAGGGCGCCCGGGCCGCCGACGTGTGGGTGGTGTCCGATCATGCGGTGTCGACGGCGTCGCT
GCTGCCCGCTGTCGACAACGTCCGGATCCGGCGGATCACCGGCCTGCTGCCGAGCCGCGCCGCCGACAATCTGTTCTGGC
TCGGTCGCTATCTCGAGCGCGCGGAAGCGACGCTGCGGTTGGTGCGCGCGCTCAGCGCGCCGCAGCGCGACCCCGGCAAG
GGGCCGCTGCATCACGCCATCGAACGCATTCAGCGGCTGCTGATCAGTTGGGGCGCGACCTCGCTCGGTGCGCGCGCGCA
GACCGCGAAGATCGCCGCCGACGCGCTGCAGAGCGAGGAGCAGTTCGGTTCGGCGCTGTCCCTGATCCGCGCCGCGCAAC
GCAACGCATCGTCGTTGCGCGAGCGGCTGTCGCCCGATGCCTGGCAGGTGATCACGCAGACCGAGGCGCGGCTGGCGAAG
CCGGCCGAGGACGAGGATGCGGTGACGGGGCTGGCGGAAATCACCTTGCAGGAACTGGCGAGCTTCTCCGGCCTGTCGCA
GGAAAACATGAACCGCGCCGCCGGCTGGCGGTTCCTTCGGATGGGTCGCCGGATCGAGCGGGCCGTCAATACGGCACGGT
TCGCGCGGCAGTTCGCCCCCGACGACGCCAGCGCCGAAGACCTCGACGTGTTGCTGACGTTGGTCGATTGCCAGATCACC
TACCGCTCGCGCTATCTGCTGGCGCCGTTGCTGGCACCGGTGCGCGATCTCGCGGTATTGGATCCGTACAATCCGCGCTC
GGTGGCGTTTCAGGTCGAGGAACTGAACGAGCACATCGCCAGCCTGCCGTCGCTGAAGGAGGGCGGGCTGATCGAGCGGC
CGCAGCGTCTCGCGGTGGCGCTGCAGGCGACGCTGACCACGGCCGAGGCGTCCGCGCTCGACGCGCGGTGGCTGTTCGCG
GTGGAGCAGGATCTGCTGTCGCTGGCCGATGCGATCGGGGCGCACTACTTCCCGCACGGCGCCAGCGCGACGCGCCCGGA
AAAGCTGACGGGGTTGGCTTGA

Upstream 100 bases:

>100_bases
GATCGATCCGCCGCAGGAAGAACGTTCATTTGAATTCCCCCTGACCCTCGACTTGCGCACGCCGCTGCTGCATTGATGAG
CGTGCAGGGGAGTCGAGATA

Downstream 100 bases:

>100_bases
TCTACGACATCCGCCACGTCACGTCCTACAGCTACGGCAGTCCGGTCAGCTACGCGCGCTGTTCCCTGCGGCTGAAGCCG
ATGAGCGACGCCAGCCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 833; Mature: 832

Protein sequence:

>833_residues
MAEQSSQSKRVRPRDRKVAQWTRDYARLPGIPDEFIGDDGAPRAVWSRYFDAFAGLAPDEIERRFRAADRHLRDAGVTYR
APGDATERAWPLSHVPLLIDDAEWQQIAAGIAQRATLLEHVLQDLYGDGRLIAEGAVPAAAIAGSPEYVRAICGVKPPGG
RYLNLYAADIGRGPDGRWWVLGDRTQAPSGTGYALENRLVLSRAFTDLYKSMNVERVAPFFEAFRDSLRASADRDEPRIG
VLTPGPFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRLDVLLRRVDSNSLDPLELDASSQLGVPGLIDV
LRKSGVVVANMPGAGVIEARSLLGFLPSLSRRLLDQDLAMPHIATWWCGQARARDEVLSRLDDFVIEGAYGPTVPGFSHS
GAVLPAELPPAVRDRLRDAIATRGIDYVAQEQVRLSTTPVWDDGKLAPRPFVLRVFAAATEHGWTVMPGGFCRIAERLDS
RAVSMGEGARAADVWVVSDHAVSTASLLPAVDNVRIRRITGLLPSRAADNLFWLGRYLERAEATLRLVRALSAPQRDPGK
GPLHHAIERIQRLLISWGATSLGARAQTAKIAADALQSEEQFGSALSLIRAAQRNASSLRERLSPDAWQVITQTEARLAK
PAEDEDAVTGLAEITLQELASFSGLSQENMNRAAGWRFLRMGRRIERAVNTARFARQFAPDDASAEDLDVLLTLVDCQIT
YRSRYLLAPLLAPVRDLAVLDPYNPRSVAFQVEELNEHIASLPSLKEGGLIERPQRLAVALQATLTTAEASALDARWLFA
VEQDLLSLADAIGAHYFPHGASATRPEKLTGLA

Sequences:

>Translated_833_residues
MAEQSSQSKRVRPRDRKVAQWTRDYARLPGIPDEFIGDDGAPRAVWSRYFDAFAGLAPDEIERRFRAADRHLRDAGVTYR
APGDATERAWPLSHVPLLIDDAEWQQIAAGIAQRATLLEHVLQDLYGDGRLIAEGAVPAAAIAGSPEYVRAICGVKPPGG
RYLNLYAADIGRGPDGRWWVLGDRTQAPSGTGYALENRLVLSRAFTDLYKSMNVERVAPFFEAFRDSLRASADRDEPRIG
VLTPGPFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRLDVLLRRVDSNSLDPLELDASSQLGVPGLIDV
LRKSGVVVANMPGAGVIEARSLLGFLPSLSRRLLDQDLAMPHIATWWCGQARARDEVLSRLDDFVIEGAYGPTVPGFSHS
GAVLPAELPPAVRDRLRDAIATRGIDYVAQEQVRLSTTPVWDDGKLAPRPFVLRVFAAATEHGWTVMPGGFCRIAERLDS
RAVSMGEGARAADVWVVSDHAVSTASLLPAVDNVRIRRITGLLPSRAADNLFWLGRYLERAEATLRLVRALSAPQRDPGK
GPLHHAIERIQRLLISWGATSLGARAQTAKIAADALQSEEQFGSALSLIRAAQRNASSLRERLSPDAWQVITQTEARLAK
PAEDEDAVTGLAEITLQELASFSGLSQENMNRAAGWRFLRMGRRIERAVNTARFARQFAPDDASAEDLDVLLTLVDCQIT
YRSRYLLAPLLAPVRDLAVLDPYNPRSVAFQVEELNEHIASLPSLKEGGLIERPQRLAVALQATLTTAEASALDARWLFA
VEQDLLSLADAIGAHYFPHGASATRPEKLTGLA
>Mature_832_residues
AEQSSQSKRVRPRDRKVAQWTRDYARLPGIPDEFIGDDGAPRAVWSRYFDAFAGLAPDEIERRFRAADRHLRDAGVTYRA
PGDATERAWPLSHVPLLIDDAEWQQIAAGIAQRATLLEHVLQDLYGDGRLIAEGAVPAAAIAGSPEYVRAICGVKPPGGR
YLNLYAADIGRGPDGRWWVLGDRTQAPSGTGYALENRLVLSRAFTDLYKSMNVERVAPFFEAFRDSLRASADRDEPRIGV
LTPGPFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRLDVLLRRVDSNSLDPLELDASSQLGVPGLIDVL
RKSGVVVANMPGAGVIEARSLLGFLPSLSRRLLDQDLAMPHIATWWCGQARARDEVLSRLDDFVIEGAYGPTVPGFSHSG
AVLPAELPPAVRDRLRDAIATRGIDYVAQEQVRLSTTPVWDDGKLAPRPFVLRVFAAATEHGWTVMPGGFCRIAERLDSR
AVSMGEGARAADVWVVSDHAVSTASLLPAVDNVRIRRITGLLPSRAADNLFWLGRYLERAEATLRLVRALSAPQRDPGKG
PLHHAIERIQRLLISWGATSLGARAQTAKIAADALQSEEQFGSALSLIRAAQRNASSLRERLSPDAWQVITQTEARLAKP
AEDEDAVTGLAEITLQELASFSGLSQENMNRAAGWRFLRMGRRIERAVNTARFARQFAPDDASAEDLDVLLTLVDCQITY
RSRYLLAPLLAPVRDLAVLDPYNPRSVAFQVEELNEHIASLPSLKEGGLIERPQRLAVALQATLTTAEASALDARWLFAV
EQDLLSLADAIGAHYFPHGASATRPEKLTGLA

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007296
- InterPro:   IPR007297
- InterPro:   IPR007302 [H]

Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 91225; Mature: 91094

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQSSQSKRVRPRDRKVAQWTRDYARLPGIPDEFIGDDGAPRAVWSRYFDAFAGLAPDE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHH
IERRFRAADRHLRDAGVTYRAPGDATERAWPLSHVPLLIDDAEWQQIAAGIAQRATLLEH
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
VLQDLYGDGRLIAEGAVPAAAIAGSPEYVRAICGVKPPGGRYLNLYAADIGRGPDGRWWV
HHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE
LGDRTQAPSGTGYALENRLVLSRAFTDLYKSMNVERVAPFFEAFRDSLRASADRDEPRIG
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
VLTPGPFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRLDVLLRRVDSNS
EECCCCCHHHHHHHHHHHHHHCEEEECCCCEEECCCEEEEHHHHHHHHHHHHHHHHCCCC
LDPLELDASSQLGVPGLIDVLRKSGVVVANMPGAGVIEARSLLGFLPSLSRRLLDQDLAM
CCCEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PHIATWWCGQARARDEVLSRLDDFVIEGAYGPTVPGFSHSGAVLPAELPPAVRDRLRDAI
CHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ATRGIDYVAQEQVRLSTTPVWDDGKLAPRPFVLRVFAAATEHGWTVMPGGFCRIAERLDS
HHCCCHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
RAVSMGEGARAADVWVVSDHAVSTASLLPAVDNVRIRRITGLLPSRAADNLFWLGRYLER
HHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
AEATLRLVRALSAPQRDPGKGPLHHAIERIQRLLISWGATSLGARAQTAKIAADALQSEE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QFGSALSLIRAAQRNASSLRERLSPDAWQVITQTEARLAKPAEDEDAVTGLAEITLQELA
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SFSGLSQENMNRAAGWRFLRMGRRIERAVNTARFARQFAPDDASAEDLDVLLTLVDCQIT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEH
YRSRYLLAPLLAPVRDLAVLDPYNPRSVAFQVEELNEHIASLPSLKEGGLIERPQRLAVA
HHHHHHHHHHHHHHHHHHEECCCCCCHHEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LQATLTTAEASALDARWLFAVEQDLLSLADAIGAHYFPHGASATRPEKLTGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
AEQSSQSKRVRPRDRKVAQWTRDYARLPGIPDEFIGDDGAPRAVWSRYFDAFAGLAPDE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHH
IERRFRAADRHLRDAGVTYRAPGDATERAWPLSHVPLLIDDAEWQQIAAGIAQRATLLEH
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
VLQDLYGDGRLIAEGAVPAAAIAGSPEYVRAICGVKPPGGRYLNLYAADIGRGPDGRWWV
HHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE
LGDRTQAPSGTGYALENRLVLSRAFTDLYKSMNVERVAPFFEAFRDSLRASADRDEPRIG
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
VLTPGPFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRLDVLLRRVDSNS
EECCCCCHHHHHHHHHHHHHHCEEEECCCCEEECCCEEEEHHHHHHHHHHHHHHHHCCCC
LDPLELDASSQLGVPGLIDVLRKSGVVVANMPGAGVIEARSLLGFLPSLSRRLLDQDLAM
CCCEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PHIATWWCGQARARDEVLSRLDDFVIEGAYGPTVPGFSHSGAVLPAELPPAVRDRLRDAI
CHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ATRGIDYVAQEQVRLSTTPVWDDGKLAPRPFVLRVFAAATEHGWTVMPGGFCRIAERLDS
HHCCCHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
RAVSMGEGARAADVWVVSDHAVSTASLLPAVDNVRIRRITGLLPSRAADNLFWLGRYLER
HHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
AEATLRLVRALSAPQRDPGKGPLHHAIERIQRLLISWGATSLGARAQTAKIAADALQSEE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QFGSALSLIRAAQRNASSLRERLSPDAWQVITQTEARLAKPAEDEDAVTGLAEITLQELA
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SFSGLSQENMNRAAGWRFLRMGRRIERAVNTARFARQFAPDDASAEDLDVLLTLVDCQIT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEH
YRSRYLLAPLLAPVRDLAVLDPYNPRSVAFQVEELNEHIASLPSLKEGGLIERPQRLAVA
HHHHHHHHHHHHHHHHHHEECCCCCCHHEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LQATLTTAEASALDARWLFAVEQDLLSLADAIGAHYFPHGASATRPEKLTGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]