| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is crp [C]
Identifier: 86748815
GI number: 86748815
Start: 1927729
End: 1928403
Strand: Direct
Name: crp [C]
Synonym: RPB_1692
Alternate gene names: 86748815
Gene position: 1927729-1928403 (Clockwise)
Preceding gene: 86748813
Following gene: 86748816
Centisome position: 36.16
GC content: 63.26
Gene sequence:
>675_bases ATGGACATGTCCCACATCGCTCAGCACGCCGGCACTGCGGGCAGCCTGTTCGCGACGATCTTCGTGGTCGCGACCGCCAC GATGCGGACGATGATCCCGCTGCGCGTGTTCGGCATCCTGGCCAATGTCCTGCTGATCGCGGTGTCGATCCCGACCCACA ACTATCCGACCATGGCGCTGCATGCGGTGCTGCTGCCGCTCAACGTCTGGCGTCTGCACCAGATGCTGCAACTCGTCCGT GACGTGAAGAAGTCGGTCAACGGCGATCTGTCGATGGAGTGGCTGAAGCCGTTCATGACCGAGCGAAAATGCGCGGCCGG CGAGGAGCTGTTCTACAAGGACGAGAAGGCCGAGCACATGTACTACATCGTCAGCGGCCGCTTCCGCCTGGTCGAGTCCG GCATCGAACTGCCGGTCGGTGCGATCGTCGGCGAGCTCGGCATGCTGTCGCCGTCGAATACCAGGACGCAGACGCTGGAA TGCATCGAAGCCGGCGTCGTGCTGGGCGTCAGTTATCGCCAGGTCGAGGAACTCTACGTGCAGAATCCGGAATTCGGCTT CTACTTCCTGCGTCTCGCGAGCGCGCGGCTGTTTCAGAACATCGAGACGCTGGAAGCGCGGCTGGCGCAGGCTCATCTGC CGGTGCCGGCCCAGGTCGTCAGCGATACGGCCTAG
Upstream 100 bases:
>100_bases TTAAACGTGTATGGCGTGCAGTCCGTGACGGCGATCACCGATCGCCGTTGCCGCATCTTGTCGGTGTCGACGTTCGCATC TCGAAGGCAGGTTGATCCTC
Downstream 100 bases:
>100_bases CGGCGAGGACGGGGCGGTGGCAGGCTATATCGATGCGATGCGCTCGACGCTCGCCGAAATCATCGGCGAGCGTGATCGCG TGGTCCCGCTCGATCTGCCG
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDMSHIAQHAGTAGSLFATIFVVATATMRTMIPLRVFGILANVLLIAVSIPTHNYPTMALHAVLLPLNVWRLHQMLQLVR DVKKSVNGDLSMEWLKPFMTERKCAAGEELFYKDEKAEHMYYIVSGRFRLVESGIELPVGAIVGELGMLSPSNTRTQTLE CIEAGVVLGVSYRQVEELYVQNPEFGFYFLRLASARLFQNIETLEARLAQAHLPVPAQVVSDTA
Sequences:
>Translated_224_residues MDMSHIAQHAGTAGSLFATIFVVATATMRTMIPLRVFGILANVLLIAVSIPTHNYPTMALHAVLLPLNVWRLHQMLQLVR DVKKSVNGDLSMEWLKPFMTERKCAAGEELFYKDEKAEHMYYIVSGRFRLVESGIELPVGAIVGELGMLSPSNTRTQTLE CIEAGVVLGVSYRQVEELYVQNPEFGFYFLRLASARLFQNIETLEARLAQAHLPVPAQVVSDTA >Mature_224_residues MDMSHIAQHAGTAGSLFATIFVVATATMRTMIPLRVFGILANVLLIAVSIPTHNYPTMALHAVLLPLNVWRLHQMLQLVR DVKKSVNGDLSMEWLKPFMTERKCAAGEELFYKDEKAEHMYYIVSGRFRLVESGIELPVGAIVGELGMLSPSNTRTQTLE CIEAGVVLGVSYRQVEELYVQNPEFGFYFLRLASARLFQNIETLEARLAQAHLPVPAQVVSDTA
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24950; Mature: 24950
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMSHIAQHAGTAGSLFATIFVVATATMRTMIPLRVFGILANVLLIAVSIPTHNYPTMAL CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHH HAVLLPLNVWRLHQMLQLVRDVKKSVNGDLSMEWLKPFMTERKCAAGEELFYKDEKAEHM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEE YYIVSGRFRLVESGIELPVGAIVGELGMLSPSNTRTQTLECIEAGVVLGVSYRQVEELYV EEEECCCHHEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH QNPEFGFYFLRLASARLFQNIETLEARLAQAHLPVPAQVVSDTA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MDMSHIAQHAGTAGSLFATIFVVATATMRTMIPLRVFGILANVLLIAVSIPTHNYPTMAL CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHH HAVLLPLNVWRLHQMLQLVRDVKKSVNGDLSMEWLKPFMTERKCAAGEELFYKDEKAEHM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCEE YYIVSGRFRLVESGIELPVGAIVGELGMLSPSNTRTQTLECIEAGVVLGVSYRQVEELYV EEEECCCHHEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH QNPEFGFYFLRLASARLFQNIETLEARLAQAHLPVPAQVVSDTA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA