| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fpr [H]
Identifier: 86748793
GI number: 86748793
Start: 1901913
End: 1902686
Strand: Direct
Name: fpr [H]
Synonym: RPB_1670
Alternate gene names: 86748793
Gene position: 1901913-1902686 (Clockwise)
Preceding gene: 86748792
Following gene: 86748794
Centisome position: 35.67
GC content: 64.21
Gene sequence:
>774_bases GTGAGCAATCTGATGGAAGAGCGCGTTCTCTCCGTTCGCCACTGGACCGATCGTCTGTTCAGCTTCACCACCACCCGCGA GGCCGGCTTCCGGTTCAGGAACGGTGAATTCACCATGGCCGGCATCAGGGTCGACGGCCGCCCGCTGCTGCGCGCCTATT CGGTGGCGAGCCCGAACTACGAAGAGACGCTGGAGTTCTATTCGATCAAGGTGCCGAACGGGCCGCTGACCTCGCGCCTG CAGCATCTCAAGGAAGGCGACACCATCATCGTCGGACGCAAGGCGACCGGGACCCTGGTGATCGACAATCTGCGTCCGGG CGCGACGCTGTATCTGCTCGCGACCGGCACCGGGCTCGCTCCGTTCCTGTCGATCATCCGCGATCCCGAGACCTACGAGC GGTTCGAGAAGATCGTGCTGGTGCACGGCTGCCGGCAGGTGGCCGAGCTGGCCTACGGCGAGTCGATGGTGGCTGCGCTG CAGGACCACGAGTTCCTCGGCGACGACGTCAAGGCCAAGCTGATCTACTACCCGACCGTCACCCGCGAGCCGTTCCGTCA TCAGGGACGGATCTCGAAACTGATGGACAGCGGTCAGCTCTACAGCGACATCGGCCTGCCGCCGCTCGACAAGTCGCGCG ATCGCGTGATGCTGTGCGGCTCCACGCTGATGATGGGGGATTTGAAGAGCCGTCTGGCCGAGCTCGGCTTCGAGGAAGGC AACCACGGCGAGGCCGGCGACTTCGTGCTCGAGAAATCCTTCGCCGAACGCTGA
Upstream 100 bases:
>100_bases TTTTCATTCGTGTACAAACAATCTGCCGCCCGCTGGCGCCCCGTCTCGTTTCTCGCGCGTCCGCGTTCGGCCGATCAAAC ACCAACTCCGGAGTTCTCCC
Downstream 100 bases:
>100_bases GTGATTTCGGCGACACGACGTCAAAGCTGTTTTCAAGCGCCGTGCAGCCGCCTACAATTCGTTAGCTTGCAAACGAACGA GCCCACCTTATTCGGAGAAG
Product: ferredoxin--NADP(+) reductase
Products: NA
Alternate protein names: FNR; Protein X [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSNLMEERVLSVRHWTDRLFSFTTTREAGFRFRNGEFTMAGIRVDGRPLLRAYSVASPNYEETLEFYSIKVPNGPLTSRL QHLKEGDTIIVGRKATGTLVIDNLRPGATLYLLATGTGLAPFLSIIRDPETYERFEKIVLVHGCRQVAELAYGESMVAAL QDHEFLGDDVKAKLIYYPTVTREPFRHQGRISKLMDSGQLYSDIGLPPLDKSRDRVMLCGSTLMMGDLKSRLAELGFEEG NHGEAGDFVLEKSFAER
Sequences:
>Translated_257_residues MSNLMEERVLSVRHWTDRLFSFTTTREAGFRFRNGEFTMAGIRVDGRPLLRAYSVASPNYEETLEFYSIKVPNGPLTSRL QHLKEGDTIIVGRKATGTLVIDNLRPGATLYLLATGTGLAPFLSIIRDPETYERFEKIVLVHGCRQVAELAYGESMVAAL QDHEFLGDDVKAKLIYYPTVTREPFRHQGRISKLMDSGQLYSDIGLPPLDKSRDRVMLCGSTLMMGDLKSRLAELGFEEG NHGEAGDFVLEKSFAER >Mature_256_residues SNLMEERVLSVRHWTDRLFSFTTTREAGFRFRNGEFTMAGIRVDGRPLLRAYSVASPNYEETLEFYSIKVPNGPLTSRLQ HLKEGDTIIVGRKATGTLVIDNLRPGATLYLLATGTGLAPFLSIIRDPETYERFEKIVLVHGCRQVAELAYGESMVAALQ DHEFLGDDVKAKLIYYPTVTREPFRHQGRISKLMDSGQLYSDIGLPPLDKSRDRVMLCGSTLMMGDLKSRLAELGFEEGN HGEAGDFVLEKSFAER
Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=237, Percent_Identity=39.2405063291139, Blast_Score=144, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 28900; Mature: 28769
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLMEERVLSVRHWTDRLFSFTTTREAGFRFRNGEFTMAGIRVDGRPLLRAYSVASPNY CCHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCCEEEEEEEECCCHHHHEEECCCCCH EETLEFYSIKVPNGPLTSRLQHLKEGDTIIVGRKATGTLVIDNLRPGATLYLLATGTGLA HHHEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCEEEEEEECCCHH PFLSIIRDPETYERFEKIVLVHGCRQVAELAYGESMVAALQDHEFLGDDVKAKLIYYPTV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCC TREPFRHQGRISKLMDSGQLYSDIGLPPLDKSRDRVMLCGSTLMMGDLKSRLAELGFEEG CCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCC NHGEAGDFVLEKSFAER CCCCCCCHHHHHHHHCC >Mature Secondary Structure SNLMEERVLSVRHWTDRLFSFTTTREAGFRFRNGEFTMAGIRVDGRPLLRAYSVASPNY CHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCCEEEEEEEECCCHHHHEEECCCCCH EETLEFYSIKVPNGPLTSRLQHLKEGDTIIVGRKATGTLVIDNLRPGATLYLLATGTGLA HHHEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCEEEEEEECCCHH PFLSIIRDPETYERFEKIVLVHGCRQVAELAYGESMVAALQDHEFLGDDVKAKLIYYPTV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCC TREPFRHQGRISKLMDSGQLYSDIGLPPLDKSRDRVMLCGSTLMMGDLKSRLAELGFEEG CCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCC NHGEAGDFVLEKSFAER CCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7673160; 8034707; 9865948 [H]