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The map label for this gene is bepC [H]

Identifier: 86748756

GI number: 86748756

Start: 1839424

End: 1840983

Strand: Direct

Name: bepC [H]

Synonym: RPB_1633

Alternate gene names: 86748756

Gene position: 1839424-1840983 (Clockwise)

Preceding gene: 86748753

Following gene: 86748757

Centisome position: 34.5

GC content: 62.31

Gene sequence:

>1560_bases
ATGCCTTGGAATGTTCGCACTTTTGCTGCCGTAGCATTGATCGCCCTCGGAGCCGACCCTGCCGGGGCTGCCGAGCCATT
CACGATTTTAGATGCGATCAATCAGGCGGTTAAGACCAATCCCGGGGTGGGGGAAGCCGCTGCCAACCGGCGCGCGACCG
AGGCCGAACTGCGCCAGACGCAAGGCACGTTGCTCCCCCAGGTTCGCCTGCAGGCCAGCGCGGGACCTGAGAAGCTGCGG
CAATACGATGTGGCAACTCCGAACAACGACGAGTACCTACGCGGGCGCCAAGGATCCGTCGTGGTTCGTCAGTTGCTGTT
CGATGGCTTCGCATCGATCAACGAGGTTTGGCGGCAGGCGGCCCGCGTCGACGCAGCGGCTTTCCGGGTGCTGGAGCGCA
CCGAGCTGATCGGTCTCGACGCCGCAGAGGCCTACATCGATATGGTGCGCTACACCAAATTGGTGGCGCTCGCTCAGCAG
AACCTCAAAGTACATCTCGAATTGCGTAAGAACGTCCTTGCCCGCTTCCAAGGCGGTCGAGCCGGGGAGGGTGACACCCA
GCAGGCAGAAGAGCGGGTTGCAGCTGCGGAAGCCGTCGCTGCGGAGTTTCGCCTCAGCCTGGACTCTGCACGCGCGAAGT
ATCGCAAGGTCGTCGGGCTCGAGCCCTACAATCTGCGCTTCCCGGGCCGACTGTCGGATCTGCCGCAGACCAAAGAGGAA
TCGCTCGAGGTCGCCTACAAGTTCAATCCGACCATTCGAGCCGCTGGTGCCGACGTGGTAGCCGCCAACCGCGCTTTTGA
CGCCACCACGGGCGCATTCCTTCCGACGCTCGCGCTGGAAGGTCGCGCCACGCGTGGCAAGGAAACGATCCTGTACAACA
ACCAGTACGACGAAGTCAGCGGCAAGCTGGTGATGTCCTGGGACATCTTCAACGGTGGCCAGAGCAGCTGGAGGCGCAAC
GAAGCCGCCGAGCGGATGATCCAGGAACAGCAGAAGCTCGCGAGGTTACAGCGCGACGCTCTCGAATCGCTGGATAAGGC
CTGGGCGGCGCGAACCATCACGAACGACCGAGCTGCGGCCCTGGTCCGCGATGTCGAGGCCGCCCGCCGGACCTTCGCGG
CCTATACCAAGGAGTATGAACTCGGTCAGCGCACGCTGGTCGATCTGCTGAATTCGCAGAACCAGTACTTCAACGCCAGT
GTTTCGCTGGTCTCCGCGCGCGGCGTTGCGGTTTTTGCGGACTATCAATTGCTGGCGACGATGGGGCAGCTGCTTGAATA
TCTCAAGACTGGTCATCCGCCGGAGATCCAACTGGTCGACGTTCACCCGAGCGGATTTATCGGTTTCGCTCTGGCGCCGG
TGCGTCTTCGTCCGCCCGGCCCTGGTCCGGAGCCCGTGAATGCGGCGGGACCGGTGAGATATTTCGAATCACCCTTTGAA
ACCGCCAAGCTGCCTCGGGTGATCTCATTCGATGACCGCTGGGCATCGGGGCATGCCACCAATGCCAACGCTTCTGCGAT
ATTCCCCGGACCCTATGCGGCCGCAGGAGCGAGGTATTGA

Upstream 100 bases:

>100_bases
CTTGTCGGATTCAGTCGCGGTTTTGCCACACAGGATAACTTTCATCGCCGGCGGTAGTAACTTCATTGCGAGTCAACTGT
TGGTTTGTTAATTGTTAGAT

Downstream 100 bases:

>100_bases
AGCTCGATCGGTGCGACAGCGCCGCCCGAACGACGTCAAGGCGCGGATTTGGATCTGCTAAGGGCATACGCCGGGCGCCA
TCGACCGAGTTCAAGTGCGA

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MPWNVRTFAAVALIALGADPAGAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQTQGTLLPQVRLQASAGPEKLR
QYDVATPNNDEYLRGRQGSVVVRQLLFDGFASINEVWRQAARVDAAAFRVLERTELIGLDAAEAYIDMVRYTKLVALAQQ
NLKVHLELRKNVLARFQGGRAGEGDTQQAEERVAAAEAVAAEFRLSLDSARAKYRKVVGLEPYNLRFPGRLSDLPQTKEE
SLEVAYKFNPTIRAAGADVVAANRAFDATTGAFLPTLALEGRATRGKETILYNNQYDEVSGKLVMSWDIFNGGQSSWRRN
EAAERMIQEQQKLARLQRDALESLDKAWAARTITNDRAAALVRDVEAARRTFAAYTKEYELGQRTLVDLLNSQNQYFNAS
VSLVSARGVAVFADYQLLATMGQLLEYLKTGHPPEIQLVDVHPSGFIGFALAPVRLRPPGPGPEPVNAAGPVRYFESPFE
TAKLPRVISFDDRWASGHATNANASAIFPGPYAAAGARY

Sequences:

>Translated_519_residues
MPWNVRTFAAVALIALGADPAGAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQTQGTLLPQVRLQASAGPEKLR
QYDVATPNNDEYLRGRQGSVVVRQLLFDGFASINEVWRQAARVDAAAFRVLERTELIGLDAAEAYIDMVRYTKLVALAQQ
NLKVHLELRKNVLARFQGGRAGEGDTQQAEERVAAAEAVAAEFRLSLDSARAKYRKVVGLEPYNLRFPGRLSDLPQTKEE
SLEVAYKFNPTIRAAGADVVAANRAFDATTGAFLPTLALEGRATRGKETILYNNQYDEVSGKLVMSWDIFNGGQSSWRRN
EAAERMIQEQQKLARLQRDALESLDKAWAARTITNDRAAALVRDVEAARRTFAAYTKEYELGQRTLVDLLNSQNQYFNAS
VSLVSARGVAVFADYQLLATMGQLLEYLKTGHPPEIQLVDVHPSGFIGFALAPVRLRPPGPGPEPVNAAGPVRYFESPFE
TAKLPRVISFDDRWASGHATNANASAIFPGPYAAAGARY
>Mature_518_residues
PWNVRTFAAVALIALGADPAGAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQTQGTLLPQVRLQASAGPEKLRQ
YDVATPNNDEYLRGRQGSVVVRQLLFDGFASINEVWRQAARVDAAAFRVLERTELIGLDAAEAYIDMVRYTKLVALAQQN
LKVHLELRKNVLARFQGGRAGEGDTQQAEERVAAAEAVAAEFRLSLDSARAKYRKVVGLEPYNLRFPGRLSDLPQTKEES
LEVAYKFNPTIRAAGADVVAANRAFDATTGAFLPTLALEGRATRGKETILYNNQYDEVSGKLVMSWDIFNGGQSSWRRNE
AAERMIQEQQKLARLQRDALESLDKAWAARTITNDRAAALVRDVEAARRTFAAYTKEYELGQRTLVDLLNSQNQYFNASV
SLVSARGVAVFADYQLLATMGQLLEYLKTGHPPEIQLVDVHPSGFIGFALAPVRLRPPGPGPEPVNAAGPVRYFESPFET
AKLPRVISFDDRWASGHATNANASAIFPGPYAAAGARY

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 56835; Mature: 56704

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWNVRTFAAVALIALGADPAGAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQT
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHH
QGTLLPQVRLQASAGPEKLRQYDVATPNNDEYLRGRQGSVVVRQLLFDGFASINEVWRQA
CCCCCCCEEEECCCCHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARVDAAAFRVLERTELIGLDAAEAYIDMVRYTKLVALAQQNLKVHLELRKNVLARFQGGR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCC
AGEGDTQQAEERVAAAEAVAAEFRLSLDSARAKYRKVVGLEPYNLRFPGRLSDLPQTKEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
SLEVAYKFNPTIRAAGADVVAANRAFDATTGAFLPTLALEGRATRGKETILYNNQYDEVS
CEEEEEEECCEEEECCCCEEECCCCCCCCCCCHHHHHEECCCCCCCCEEEEECCCCCCCC
GKLVMSWDIFNGGQSSWRRNEAAERMIQEQQKLARLQRDALESLDKAWAARTITNDRAAA
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVRDVEAARRTFAAYTKEYELGQRTLVDLLNSQNQYFNASVSLVSARGVAVFADYQLLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEHHHHHHH
MGQLLEYLKTGHPPEIQLVDVHPSGFIGFALAPVRLRPPGPGPEPVNAAGPVRYFESPFE
HHHHHHHHHCCCCCCEEEEEECCCCEEEHEEECEEECCCCCCCCCCCCCCCHHHHCCCHH
TAKLPRVISFDDRWASGHATNANASAIFPGPYAAAGARY
HHCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
PWNVRTFAAVALIALGADPAGAAEPFTILDAINQAVKTNPGVGEAAANRRATEAELRQT
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHH
QGTLLPQVRLQASAGPEKLRQYDVATPNNDEYLRGRQGSVVVRQLLFDGFASINEVWRQA
CCCCCCCEEEECCCCHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARVDAAAFRVLERTELIGLDAAEAYIDMVRYTKLVALAQQNLKVHLELRKNVLARFQGGR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCC
AGEGDTQQAEERVAAAEAVAAEFRLSLDSARAKYRKVVGLEPYNLRFPGRLSDLPQTKEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
SLEVAYKFNPTIRAAGADVVAANRAFDATTGAFLPTLALEGRATRGKETILYNNQYDEVS
CEEEEEEECCEEEECCCCEEECCCCCCCCCCCHHHHHEECCCCCCCCEEEEECCCCCCCC
GKLVMSWDIFNGGQSSWRRNEAAERMIQEQQKLARLQRDALESLDKAWAARTITNDRAAA
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVRDVEAARRTFAAYTKEYELGQRTLVDLLNSQNQYFNASVSLVSARGVAVFADYQLLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEHHHHHHH
MGQLLEYLKTGHPPEIQLVDVHPSGFIGFALAPVRLRPPGPGPEPVNAAGPVRYFESPFE
HHHHHHHHHCCCCCCEEEEEECCCCEEEHEEECEEECCCCCCCCCCCCCCCHHHHCCCHH
TAKLPRVISFDDRWASGHATNANASAIFPGPYAAAGARY
HHCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]